acsbg1 (acsbg1)


Basic Information

Item Value
gene id acsbg1
gene name acsbg1
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 16141119 ~ 16228334 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU177243
GCaactttaatgtatttaatcTCTTAAATTGACCAACGTTTACGCCTGCCATTAACCCAGTGACAAAGTGGTTATGATAAAATGTGAGGGACCAGAGAATATCTCCAGTCAATAAATAAAGGATATCTTGGGCTATGCACTTCAtttgacagagaaaaaaaaacacattttacacatctATACCGTTGACAAGTTTTAacagttctcttttttttttttttttttttttttttt
>TU177246
CAGGAAGGCAGCTGAGCAGCACATACCAGAAGGACAGTCAGTATGATAAGCAGTGGAATATCTCAAGAACCATCCTGCAACAAAAATCAACACAGAGTCAAGGAGAAACAACACAGCTTAGGGCGTTCACCGTTGGGGCTCATGACAGACTCCAAAAAGAAGGGAGAAGAACAGGCTACAGGTAATGAAGCAAGCCAGTAAGCTACTTTGGGTTGGTGCAGC
>XM_026918913.2
AGAGGAGGAGGGTCATCGTTTCCTCATTAATACATGAACAGGAAGGCAGCTGAGCAGCACATACCAGAAGGACAGTCAGTATGATAAGCAGTGGAATATCTCAAGAACCATCCTGCAACAAAAATCAACACAGAGTCAAGGAGAAACAACACAGCTTAGGGCGTTCACCGTTGGGGCTCATGACAGACTCCAAAAAGAAGGGAGAAGAACAGGCTACAGCACAGAAAATTTGTGTGGAAGAGTTTTTAGCAGGGAAAGCTCTGGCTCCAGCCCAGTGCCTTTGGACCACAGAGGCGAGTGGATCAGTGCAACTGCGAATAGATGACCTCTGTCCACAGGAGCCAATCACAGTCCATCAGATGTTTATGACCTCAGTTCAGAAATATGGCAATTTGTTTGCCCTGGCAACTAAAAGAAAAGGCAAATGGGAAAAGATTACATTCTCTGAATACTACCAGTGCTGTCGGATGGCTGCCAAGAGCTTTCTGAAGTTGGGGCTGGAACGTTTCCACAGTGTGGCGATCTTGGGATTCAATTCAGCAGAGTGGTTCTTTTCTGCCGTAGGAGCTATCTTCGCAGgGGGTATAATGACAGGGATCTATGCCACAAATTCTCCTGAAGCGTGTCATTATGTGGCCAGTGACTCAAGAGCAAATATTATTGTAGTGGAAAATCAAAAGCAGCTGGATAAAATTTTGCAGGTAAAGGATAAACTGCCACATCTGAAAGCCATTGTGCAATATTCTGGACCCTTGCTGGAGAAACTGCCCAATCTGTATTTGTGGGAGGAGTTCATGAGTCTGGGCCTGGATATTCCAGACAAAACccttgatgacatcatcagtagTCAGAAAGTCAATCAATGCTGTGTTCTTATCTACACATCAGGAACCACAGGCATGCCAAAAGGAGTGATGCTCAGCCATGACAATATCACATGGACGTCTCACCATGCGAGCAGGGCTGGAGGCATGCAGCCTGCAGAGATAAAACAGGAATCCATAGTGAGCTACCTCCCCCTCAGCCATATTGCTGCTCAGATCTATGACCTGTGGACAGGGATTCAGTGGGGCGAGTTAGTCTGTTTCGCACAGCCTGATGCTTTGAAGGGCAGCCTGATCGAGACTTTGAAAGAGATCAACCCTTCATCTCATATGGGAGTCCCACGTGTTTGGGAAAAAATAATGGAGAAAATAAAGGAGGAGGTATCACACTGTGCATACATAAAAAAGAAACTGCTGACCTGGGCCATGTCTGTTGGTTTGGAGGCTAATCAAAGGGATGAGGAGAAATCAATTCTCTTCGCCCTAGCAGATGTGCTGGTCCTGGAAAAACTTCGTACTGAGCTGGGCCTCTCTTATTGTGAGAAGTTCTTCTCTGGTGCAGCTCCTCTTGGAAATGACACAGTCCAGTTCTTCCTTGGTCTCAACATTAAGTTATATGAGGCTTATGGCATGAGTGAAAGCAGTGGGCCTCATTTTATGTCTGGTCCAAAAGTTCACAAGCAGTCAAGTTGTGGCAGGGTGGTTCCTGGCTGCAGATATAAACTAGTTAATGTTGATAGTGATGGTATTGGGGAGGTGTGCTTTTGGGGTCGGAATGTCTTTATGGGGTATCTCAACATGGAGGATAAAACCAAGGAAACATTGGATGAAGATGGCTGGCTGCATTCTGGAGACTTGGGCAAAACAGATGAAGATTTCCTTTACATTACTGGAAGGATAAAAGAGTTGATAATAACTGCTGGTGGAGAGAATGTTCCTCCAGTTCCTATAGAGGATGCTGTGAAAAAGGAGCTGCCTATAATCAGTAATGCCATGCTAATTGGGGACAAGAGGAAGTTTCTCTCAATGCTGCTCACACTTAAGTGTGTCACCAATGCTGAAACCATGGAGCCCACCGATGACCTTAGCACTGACACTGTGGAATACTTTCAACAACGTGGCATCCAGGCAACAAAGGTTTCCGATGTAATTGGAGGGAAAGATCAAGCAGTGAACCAGGCCATTCAGGAGGGCATTGACCGGGTCAATGCTAAGGCCAACTCCAACGCCCAGCGTATTCAGAAATGGACAATTGTAGGGAAAGACTTCTCAGTCTCTGGAGGAGAGCTAGgcCCAACAATGAAACTGCGACGACCGTTTGTCCTGAAGAAGTACCACAATGAAATAGAAAATTTCTACAGGGAATGAAGAAATAACTACAACTAACCAGGCTAGACCAGTGGTGTCAGTAGCATTCAACCTCACTGATCACACCCAATTCAGTTAGTTCTTCAGCTAATTACCAGTTTGGTCTGTTAGAAAATGGTAAACAAAAATGTCTGCATATATCTACATCATGCCTGTGACCGGAGTCTGACACCCAGAATCTAGAAACATCAAATTCttgaaactgtatttaaaatcaTGCTAGTCAGACCATCTTCCTCTTAGTGAAACCTCATCTTTATGGAGTCAGAAGATATTTGTTAGATATACTTAAATTACAGGGAGGAATAATGCTCTAATCAATTAGAATACATTTGGACTGTCCTTGGGTAATTGATCTTTCCTACACAGGAAAGCATGTGCAGTGTAATACTGGCTATGAGAATTAGATACATTTGCATTGCAGTGGGAACACATCGTTTCTCCTTTGACAGTCAGGAACAGCTGTTTAAATCCTGGTGAATCATGATGAGCTTTGGGGCTCTGGCTTTCTCAGGCATGGAAATCATGCATCTGAGATCATTGTCTAATATACTTATAACATCATTTAATATACCCTACTTAAACTTACCATTCTATATATCTAGAAAATAAAAACCAGTGAAACTTATATTCAAAATATCAGCaactttaatgtatttaatcTCTTAAATTGACCAACGTTTACGCCTGCCATTAACCCAGTGACAAAGTGGTTATGATAAAATGTGAGGGACCAGAGAATATCTCCAGTCAATAAATAAAGGATATCTTGGGCTATGCACTTCAtttgacagagaaaaaaaaacacattttacacatctATACCGTTGACAAGTTTTAacagttctcttttttttgtttggaggtgaaataaacatgaaaaaaaaaa
>XM_034307238.1
AGGAGAGGAGGAGGGTCATCGTTTCCTCATTAATACATGAACAGGAAGGCAGCTGAGCAGCACATACCAGAAGGACAGTCAGTATGATAAGCAGTGGAATATCTCAAGAACCATCCTGCAACAAAAATCAACACAGAGTCAAGGAGAAACAACACAGCTTAGGGCGTTCACCGTTGGGGCTCATGACAGACTCCAAAAAGAAGGGAGAAGAACAGGCTACAGCACAGAAAATTTGTGTGGAAGAGTTTTTAGCAGGGAAAGCTCTGGCTCCAGCCCAGTGCCTTTGGACCACAGAGGCGAGTGGATCAGTGCAACTGCGAATAGATGACCTCTGTCCACAGGAGCCAATCACAGTCCATCAGATGTTTATGACCTCAGTTCAGAAATATGGCAATTTGTTTGCCCTGGCAACTAAAAGAAAAGGCAAATGGGAAAAGATTACATTCTCTGAATACTACCAGTGCTGTCGGATGGCTGCCAAGAGCTTTCTGAAGTTGGGGCTGGAACGTTTCCACAGTGTGGCGATCTTGGGATTCAATTCAGCAGAGTGGTTCTTTTCTGCCGTAGGAGCTATCTTCGCAGgGGGTATAATGACAGGGATCTATGCCACAAATTCTCCTGAAGCGTGTCATTATGTGGCCAGTGACTCAAGAGCAAATATTATTGTAGTGGAAAATCAAAAGCAGCTGGATAAAATTTTGCAGGTAAAGGATAAACTGCCACATCTGAAAGCCATTGTGCAATATTCTGGACCCTTGCTGGAGAAACTGCCCAATCTGTATTTGTGGGAGGAGTTCATGAGTCTGGGCCTGGATATTCCAGACAAAACccttgatgacatcatcagtagTCAGAAAGTCAATCAATGCTGTGTTCTTATCTACACATCAGGAACCACAGGCATGCCAAAAGGAGTGATGCTCAGCCATGACAATATCACATGGACGTCTCACCATGCGAGCAGGGCTGGAGGCATGCAGCCTGCAGAGATAAAACAGGAATCCATAGTGAGCTACCTCCCCCTCAGCCATATTGCTGCTCAGATCTATGACCTGTGGACAGGGATTCAGTGGGGCGAGTTAGTCTGTTTCGCACAGCCTGATGCTTTGAAGGGCAGCCTGATCGAGACTTTGAAAGAGATCAACCCTTCATCTCATATGGGAGTCCCACGTGTTTGGGAAAAAATAATGGAGAAAATAAAGGAGGAGGTATCACACTGTGCATACATAAAAAAGAAACTGCTGACCTGGGCCATGTCTGTTGGTTTGGAGGCTAATCAAAGGGATGAGGAGAAATCAATTCTCTTCGCCCTAGCAGATGTGCTGGTCCTGGAAAAACTTCGTACTGAGCTGGGCCTCTCTTATTGTGAGAAGTTCTTCTCTGGTGCAGCTCCTCTTGGAAATGACACAGTCCAGTTCTTCCTTGGTCTCAACATTAAGTTATATGAGGCTTATGGCATGAGTGAAAGCAGTGGGCCTCATTTTATGTCTGGTCCAAAAGTTCACAAGCAGTCAAGTGATGGTATTGGGGAGGTGTGCTTTTGGGGTCGGAATGTCTTTATGGGGTATCTCAACATGGAGGATAAAACCAAGGAAACATTGGATGAAGATGGCTGGCTGCATTCTGGAGACTTGGGCAAAACAGATGAAGATTTCCTTTACATTACTGGAAGGATAAAAGAGTTGATAATAACTGCTGGTGGAGAGAATGTTCCTCCAGTTCCTATAGAGGATGCTGTGAAAAAGGAGCTGCCTATAATCAGTAATGCCATGCTAATTGGGGACAAGAGGAAGTTTCTCTCAATGCTGCTCACACTTAAGTGTGTCACCAATGCTGAAACCATGGAGCCCACCGATGACCTTAGCACTGACACTGTGGAATACTTTCAACAACGTGGCATCCAGGCAACAAAGGTTTCCGATGTAATTGGAGGGAAAGATCAAGCAGTGAACCAGGCCATTCAGGAGGGCATTGACCGGGTCAATGCTAAGGCCAACTCCAACGCCCAGCGTATTCAGAAATGGACAATTGTAGGGAAAGACTTCTCAGTCTCTGGAGGAGAGCTAGgcCCAACAATGAAACTGCGACGACCGTTTGTCCTGAAGAAGTACCACAATGAAATAGAAAATTTCTACAGGGAATGAAGAAATAACTACAACTAACCAGGCTAGACCAGTGGTGTCAGTAGCATTCAACCTCACTGATCACACCCAATTCAGTTAGTTCTTCAGCTAATTACCAGTTTGGTCTGTTAGAAAATGGTAAACAAAAATGTCTGCATATATCTACATCATGCCTGTGACCGGAGTCTGACACCCAGAATCTAGAAACATCAAATTCttgaaactgtatttaaaatcaTGCTAGTCAGACCATCTTCCTCTTAGTGAAACCTCATCTTTATGGAGTCAGAAGATATTTGTTAGATATACTTAAATTACAGGGAGGAATAATGCTCTAATCAATTAGAATACATTTGGACTGTCCTTGGGTAATTGATCTTTCCTACACAGGAAAGCATGTGCAGTGTAATACTGGCTATGAGAATTAGATACATTTGCATTGCAGTGGGAACACATCGTTTCTCCTTTGACAGTCAGGAACAGCTGTTTAAATCCTGGTGAATCATGATGAGCTTTGGGGCTCTGGCTTTCTCAGGCATGGAAATCATGCATCTGAGATCATTGTCTAATATACTTATAACATCATTTAATATACCCTACTTAAACTTACCATTCTATATATCTAGAAAATAAAAACCAGTGAAACTTATATTCAAAATATCAGCaactttaatgtatttaatcTCTTAAATTGACCAACGTTTACGCCTGCCATTAACCCAGTGACAAAGTGGTTATGATAAAATGTGAGGGACCAGAGAATATCTCCAGTCAATAAATAAAGGATATCTTGGGCTATGCACTTCAtttgacagagaaaaaaaaacacattttacacatctATACCGTTGACAAGTTTTAacagttctcttttttttgtttggaggtgaaataaacatgaaaaaaaaaa

Function

symbol description
acsbg1 Predicted to enable long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid biosynthetic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in adrenoleukodystrophy. Orthologous to human ACSBG1 (acyl-CoA synthetase bubblegum family member 1).

NR:

description
PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1

GO: NA

KEGG:

id description
K15013 ACSBG; long-chain-fatty-acid--CoA ligase ACSBG

RNA

RNA id representative length rna type GC content exon number start site end site
TU177243 False 234 lncRNA 0.31 2 16141119 16219622
TU177246 False 222 lncRNA 0.48 2 16224977 16228293
XM_026918913.2 True 3081 mRNA 0.43 14 16219376 16228331
XM_034307238.1 False 3033 mRNA 0.43 14 16219376 16228334

Neighbor

gene id symbol gene type direction distance location
dapk2b dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496 coding downstream 215 16121657 ~ 16140904 (-)
ca12 ca12 coding downstream 97267 16028155 ~ 16043852 (-)
man2c1 man2c1,LOC107752311 coding downstream 116261 16014920 ~ 16024858 (-)
sema7a sema7a coding downstream 135756 15997889 ~ 16005363 (-)
ccdc33 ccdc33 coding downstream 204541 15904320 ~ 15936578 (-)
rps27l rps27l,zgc:136826,LOC107598918,LOC107752326 coding upstream 7809 16236143 ~ 16238157 (-)
LOC113530180 LOC108274564 coding upstream 23010 16251344 ~ 16254496 (-)
LOC113529693 LOC108274564,LOC108433637,LOC108441836,LOC107750517 coding upstream 28176 16256510 ~ 16262939 (-)
trpm1b LOC108274564,LOC108433637,LOC107585966,LOC107750517 coding upstream 37228 16265562 ~ 16267986 (-)
otud7a otud7a,LOC108275340,LOC107715690,LOC107659507,LOC107752330,LOC107698115,LOC107550219,LOC107598848 coding upstream 97608 16325942 ~ 16362375 (-)
G149495 NA non-coding downstream 45944 16093072 ~ 16095175 (-)
LOC113529609 NA non-coding downstream 48189 16068429 ~ 16092930 (-)
G149366 NA non-coding downstream 237217 15903692 ~ 15903902 (-)
G149364 NA non-coding downstream 238477 15902440 ~ 15902642 (-)
G149363 cyp11a non-coding downstream 242958 15897890 ~ 15898161 (-)
LOC117597941 NA non-coding upstream 2280 16230614 ~ 16231809 (-)
G149643 NA non-coding upstream 20827 16249161 ~ 16251085 (-)
G149649 NA non-coding upstream 26313 16254647 ~ 16255486 (-)
G149632 klf13,znf746,LOC108274922,LOC107550220,LOC107598847,LOC107752329 non-coding upstream 81556 16309890 ~ 16317926 (-)
G149718 NA non-coding upstream 194332 16422666 ~ 16424604 (-)
islr2 islr2,LOC107662462 other downstream 149025 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 421544 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 912134 15219970 ~ 15228985 (-)
dynlrb2 dynlrb2,LOC103025073,LOC106573385 other downstream 1053059 15086113 ~ 15088060 (-)
G148647 fjx1 other downstream 1328414 14810004 ~ 14812705 (-)
LOC113529460 nrg4 other upstream 825019 17053353 ~ 17058906 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 1976317 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 2074808 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 2076304 18304638 ~ 18304801 (-)
parp6b parp6,parp6b,LOC108275327,LOC108436940,LOC107661437,LOC107753615,LOC107598827,LOC107665100 other upstream 2125640 18353974 ~ 18364036 (-)

Expression


Co-expression Network