G150469


Basic Information

Item Value
gene id G150469
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 17655589 ~ 17655789 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU178231
ATTTGAACGATCCAAAGGAAGATGCCAGAGAAATAAACCAAGCTTAAAGGTGCAAGTAGCTAATTAAGTaactaatccacctactggaatgGGTGTTGAGAGGAACTCAGAGGAAATCcatacagacacagggagaacatgcataaTAACTTTGAAACAGAGCTCAGGATAGAACTGGTTACCCTAGAGCCATGAGATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178231 True 201 lncRNA 0.42 1 17655589 17655789

Neighbor

gene id symbol gene type direction distance location
dldh dld,dldh coding downstream 94766 17554092 ~ 17560823 (-)
parp16 parp16,LOC107589319,LOC107595248,LOC107662480 coding downstream 200511 17448608 ~ 17455078 (-)
apba2a LOC108275011,LOC106584731 coding downstream 221152 17424907 ~ 17434437 (-)
duox duox1,LOC108436899,LOC107712499,LOC106561775 coding downstream 235386 17405410 ~ 17420203 (-)
tjp1b LOC108274984,LOC108414298 coding downstream 266648 17323198 ~ 17388941 (-)
LOC113529452 NA coding upstream 98595 17754384 ~ 17760039 (-)
LOC113530008 hyal4,LOC108274447,LOC108274446 coding upstream 171691 17827480 ~ 17831769 (-)
LOC117598082 LOC108274445 coding upstream 177324 17833113 ~ 17835443 (-)
LOC117597889 LOC108274445 coding upstream 184323 17840112 ~ 17842564 (-)
LOC113530148 hyal4,LOC108436916,LOC108181664,LOC107573489,LOC107752304,LOC107753633 coding upstream 191172 17846961 ~ 17860347 (-)
G150463 NA non-coding downstream 3709 17651673 ~ 17651880 (-)
G150459 NA non-coding downstream 8644 17646733 ~ 17646945 (-)
G150424 NA non-coding downstream 56395 17598788 ~ 17599194 (-)
G150340 NA non-coding downstream 80929 17551090 ~ 17574660 (-)
G150310 NA non-coding downstream 150653 17504286 ~ 17504936 (-)
G150495 grm8b non-coding upstream 42898 17698687 ~ 17699084 (-)
G150551 NA non-coding upstream 103632 17759421 ~ 17759699 (-)
G150631 NA non-coding upstream 256851 17912640 ~ 17912855 (-)
G150776 NA non-coding upstream 456463 18112252 ~ 18112477 (-)
G150834 NA non-coding upstream 599286 18255075 ~ 18255418 (-)
LOC113529460 nrg4 other downstream 596683 17053353 ~ 17058906 (-)
acsbg1 acsbg1 other downstream 1427255 16141119 ~ 16228334 (-)
islr2 islr2,LOC107662462 other downstream 1663495 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 1936014 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 2426604 15219970 ~ 15228985 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 548862 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 647353 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 648849 18304638 ~ 18304801 (-)
parp6b parp6,parp6b,LOC108275327,LOC108436940,LOC107661437,LOC107753615,LOC107598827,LOC107665100 other upstream 698185 18353974 ~ 18364036 (-)
G150991 LOC108436944 other upstream 769530 18425319 ~ 18428973 (-)

Expression


Co-expression Network