G150631


Basic Information

Item Value
gene id G150631
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 17912640 ~ 17912855 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU178426
ggaaaaaccatgcattaagagatgtgtacatttttcttattttgcctaaatatcgtattttttcatttagtactgcccttcagaggctacagaagatagttacatgtttcccagaagacaaaataagttaaatttaccctgatcttcaaattcaaagttttcaagttttcaccccccggctcttaatgcatggtttttccttctggagcatcagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178426 True 216 lncRNA 0.36 1 17912640 17912855

Neighbor

gene id symbol gene type direction distance location
LOC113530148 hyal4,LOC108436916,LOC108181664,LOC107573489,LOC107752304,LOC107753633 coding downstream 52293 17846961 ~ 17860347 (-)
LOC117597889 LOC108274445 coding downstream 70076 17840112 ~ 17842564 (-)
LOC117598082 LOC108274445 coding downstream 77197 17833113 ~ 17835443 (-)
LOC113530008 hyal4,LOC108274447,LOC108274446 coding downstream 80871 17827480 ~ 17831769 (-)
LOC113529452 NA coding downstream 152601 17754384 ~ 17760039 (-)
asb15a asb15 coding upstream 1758 17914613 ~ 17921521 (-)
ptprz1a ptprz1,LOC108274749 coding upstream 200151 18113006 ~ 18164810 (-)
agbl2 agbl2 coding upstream 271256 18184111 ~ 18202625 (-)
lrrc10 lrrc10 coding upstream 303378 18216233 ~ 18218741 (-)
washc4 kiaa1033,si:dkey-23p11.2,LOC107696292,LOC107678984 coding upstream 315258 18228113 ~ 18245704 (-)
G150551 NA non-coding downstream 152941 17759421 ~ 17759699 (-)
G150495 grm8b non-coding downstream 213556 17698687 ~ 17699084 (-)
G150469 NA non-coding downstream 256851 17655589 ~ 17655789 (-)
G150463 NA non-coding downstream 260760 17651673 ~ 17651880 (-)
G150459 NA non-coding downstream 265695 17646733 ~ 17646945 (-)
G150776 NA non-coding upstream 199397 18112252 ~ 18112477 (-)
G150834 NA non-coding upstream 342220 18255075 ~ 18255418 (-)
G150854 NA non-coding upstream 388438 18301293 ~ 18302959 (-)
G150875 NA non-coding upstream 393354 18306209 ~ 18306443 (-)
G150891 NA non-coding upstream 425647 18338502 ~ 18338714 (-)
LOC113529460 nrg4 other downstream 853734 17053353 ~ 17058906 (-)
acsbg1 acsbg1 other downstream 1684306 16141119 ~ 16228334 (-)
islr2 islr2,LOC107662462 other downstream 1920546 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 2193065 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 2683655 15219970 ~ 15228985 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 291796 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 390287 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 391783 18304638 ~ 18304801 (-)
parp6b parp6,parp6b,LOC108275327,LOC108436940,LOC107661437,LOC107753615,LOC107598827,LOC107665100 other upstream 441119 18353974 ~ 18364036 (-)
G150991 LOC108436944 other upstream 512464 18425319 ~ 18428973 (-)

Expression


Co-expression Network