G150776


Basic Information

Item Value
gene id G150776
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 18112252 ~ 18112477 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU178583
CTTCAATTCACTTCCACTGAAACCATCATTAAGGTCAACTTAGTATTCATGGTTCAATCAGCATCATATGGTCCTTCATCACTGCAGCTCTGGCTTAGCCCAATAATTTATAGCCCTCTCTAACCATACGCATTATTACAACACACTCCTTAAAGGGCCTCTAAGCAACTACTCAATGAATACTTAGAACAAATATATAAGGGGCATCTTTGAAATAAGCAGCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178583 True 226 lncRNA 0.38 1 18112252 18112477

Neighbor

gene id symbol gene type direction distance location
asb15a asb15 coding downstream 190731 17914613 ~ 17921521 (-)
LOC113530148 hyal4,LOC108436916,LOC108181664,LOC107573489,LOC107752304,LOC107753633 coding downstream 251905 17846961 ~ 17860347 (-)
LOC117597889 LOC108274445 coding downstream 269688 17840112 ~ 17842564 (-)
LOC117598082 LOC108274445 coding downstream 276809 17833113 ~ 17835443 (-)
LOC113530008 hyal4,LOC108274447,LOC108274446 coding downstream 280483 17827480 ~ 17831769 (-)
ptprz1a ptprz1,LOC108274749 coding upstream 529 18113006 ~ 18164810 (-)
agbl2 agbl2 coding upstream 71634 18184111 ~ 18202625 (-)
lrrc10 lrrc10 coding upstream 103756 18216233 ~ 18218741 (-)
washc4 kiaa1033,si:dkey-23p11.2,LOC107696292,LOC107678984 coding upstream 115636 18228113 ~ 18245704 (-)
arid3b LOC108275332,LOC108436938,LOC107575848,LOC107752332 coding upstream 206147 18318624 ~ 18338423 (-)
G150631 NA non-coding downstream 199397 17912640 ~ 17912855 (-)
G150551 NA non-coding downstream 352553 17759421 ~ 17759699 (-)
G150495 grm8b non-coding downstream 413168 17698687 ~ 17699084 (-)
G150469 NA non-coding downstream 456463 17655589 ~ 17655789 (-)
G150463 NA non-coding downstream 460372 17651673 ~ 17651880 (-)
G150834 NA non-coding upstream 142598 18255075 ~ 18255418 (-)
G150854 NA non-coding upstream 188816 18301293 ~ 18302959 (-)
G150875 NA non-coding upstream 193732 18306209 ~ 18306443 (-)
G150891 NA non-coding upstream 226025 18338502 ~ 18338714 (-)
G150925 LOC108275437,LOC108436941,LOC107661438,LOC107696282,LOC107573699 non-coding upstream 260636 18373113 ~ 18376841 (-)
LOC113529460 nrg4 other downstream 1053346 17053353 ~ 17058906 (-)
acsbg1 acsbg1 other downstream 1883918 16141119 ~ 16228334 (-)
islr2 islr2,LOC107662462 other downstream 2120158 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 2392677 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 2883267 15219970 ~ 15228985 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 92174 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 190665 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 192161 18304638 ~ 18304801 (-)
parp6b parp6,parp6b,LOC108275327,LOC108436940,LOC107661437,LOC107753615,LOC107598827,LOC107665100 other upstream 241497 18353974 ~ 18364036 (-)
G150991 LOC108436944 other upstream 312842 18425319 ~ 18428973 (-)

Expression


Co-expression Network