Item | Value |
---|---|
gene id | LOC113529564 |
gene name | ano9,LOC108442698 |
gene type | misc |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047603.1 |
NCBI id | CM018549.1 |
chromosome length | 29458963 |
location | 15807990 ~ 15822591 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
symbol | description |
---|---|
ano9 | Enables intracellular calcium activated chloride channel activity. Involved in chloride transport and negative regulation of intracellular calcium activated chloride channel activity. Located in plasma membrane. |
description |
---|
PREDICTED: anoctamin-9 isoform X1 |
id | description |
---|---|
K19503 | ANO9, TMEM16J; anoctamin-9 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_026918826.2 | True | 3547 | mRNA | 0.44 | 24 | 15807990 | 15822591 |
XM_034307166.1 | False | 3544 | mRNA | 0.44 | 24 | 15807990 | 15822591 |
XR_003403067.2 | False | 2440 | misc_RNA | 0.45 | 21 | 15807990 | 15819573 |
XR_004578669.1 | False | 3333 | misc_RNA | 0.44 | 22 | 15807990 | 15822591 |
XR_004578670.1 | False | 2454 | misc_RNA | 0.46 | 21 | 15807990 | 15820156 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
fancf | fancf | coding | upstream | 55464 | 15751139 ~ 15752526 (+) |
si:ch211-87j1.4 | LOC108274534,LOC103040017,LOC108442681,LOC105913127,LOC107701590,LOC107695923,LOC107555711,LOC107723960,LOC107752489,LOC107571669 | coding | upstream | 173000 | 15631055 ~ 15634990 (+) |
clpxb | clpx,LOC108275190,LOC105913134,LOC108442679 | coding | upstream | 187571 | 15609440 ~ 15620419 (+) |
lrrk2 | lrrk2 | coding | upstream | 202253 | 15577183 ~ 15605737 (+) |
mphosph6 | mphosph6 | coding | upstream | 359249 | 15446796 ~ 15448741 (+) |
sigirr | sigirr | coding | downstream | 9588 | 15832179 ~ 15841507 (+) |
hexa | hexa | coding | downstream | 52272 | 15874863 ~ 15882172 (+) |
nr2e3 | nr2e3,LOC105892475,LOC107595245,LOC107589312 | coding | downstream | 65516 | 15888107 ~ 15890739 (+) |
stoml1 | stoml1 | coding | downstream | 69062 | 15891653 ~ 15895454 (+) |
LOC113530122 | cyp11a,LOC108442685,LOC106561846 | coding | downstream | 75085 | 15897676 ~ 15905329 (+) |
G149268 | NA | non-coding | upstream | 53078 | 15754665 ~ 15754912 (+) |
G149248 | NA | non-coding | upstream | 96073 | 15711013 ~ 15711917 (+) |
G149131 | NA | non-coding | upstream | 238503 | 15567836 ~ 15569487 (+) |
G149091 | cpne8,LOC108274474 | non-coding | upstream | 324087 | 15483074 ~ 15483903 (+) |
G149089 | NA | non-coding | upstream | 325962 | 15481687 ~ 15482028 (+) |
G149427 | NA | non-coding | downstream | 202253 | 16024844 ~ 16026512 (+) |
G149428 | NA | non-coding | downstream | 205016 | 16027607 ~ 16028019 (+) |
G149552 | NA | non-coding | downstream | 432093 | 16254684 ~ 16255314 (+) |
G149574 | NA | non-coding | downstream | 505665 | 16328256 ~ 16328539 (+) |
LOC117597940 | NA | non-coding | downstream | 515999 | 16338590 ~ 16341963 (+) |
svip | svip | other | upstream | 82899 | 15721278 ~ 15725091 (+) |
slc5a12 | slc5a12 | other | upstream | 155306 | 15563306 ~ 15652684 (+) |
fanci | fanci,LOC107673243,LOC107670230,LOC107564606 | other | upstream | 1978659 | 13790973 ~ 13829331 (+) |
ces2b | LOC108275184 | other | upstream | 2031119 | 13761334 ~ 13776871 (+) |
prr33 | prr33,LOC108428828,LOC107595228,LOC107742059,LOC107675453 | other | upstream | 2418794 | 13372872 ~ 13389196 (+) |
G150589 | LOC108274445 | other | downstream | 2011646 | 17834237 ~ 17842535 (+) |
tmem17 | tmem17,znf774,LOC107678976 | other | downstream | 2359963 | 18182554 ~ 18184033 (+) |
rfwd3 | rfwd3,LOC107754982 | other | downstream | 2852419 | 18675010 ~ 18683428 (+) |
urahb | LOC108274538 | other | downstream | 2899004 | 18721595 ~ 18724686 (+) |
nfat5a | LOC108274760,LOC108428435 | other | downstream | 2925236 | 18747827 ~ 18796259 (+) |