si:dkeyp-73b11.8


Basic Information

Item Value
gene id si:dkeyp-73b11.8
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 16045575 ~ 16048154 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026918866.2
CTCTGCTCTTCAACTGCAGTTTATGAGCCCTCATTTACTTCAGCTTCATCACCAGAGAACACACCACCATGAGGAACTACAGCatgtttttgctcatttttgctgtattttattgtattgagGGACAGGCCGCAACACCAGATTTCTGTAGCATGCCAAAAGATGAAGGCACAGAATCTGATAAAGACATCCAAGTCTACTTGTACTACGACAAGACTGAAGATAAGTGCTATCCGTTCCGCTACCAGGGAGCAGGTGGGAATCAGAACCGCTTCAATTATGAGTTTTACTGCATGAGAAACTGCTCCACCAATGCCGAAAAACTGTATCCTACAGACCgaaCTAAAGCTTGCCACTTGCCAAAAGCTCCAGGTGACTGTTTTGGTCATTATCTACGATATTACTATGATGCTGCTCATGGAAAGTGTGTGACATTCTACTGGACTGGCTGTGTGGGCAATGGAAACCGTTTCTTGGAATTAGAGCGTTGCAATGCCACATGTTTTGGAATATTAGataaaaatgaaaatggcgATAATGATGGTGACGTGGAATCAGACACACCAATTGGCATCATTTTGGGAGCTGTTTTAGGTGTTATTGGAGCCATCATTCTCATAATTGTGCTTGTTCTGGCGTTGAAGAAGAAGCctagcaaaagcaaaaaaaccaAAGCAAAGGAACTAAAAGTGAAAGAAGACCCAAACACTTCTGGACCTGAAATACCCCTTCATATTACTGACACGGCGTAATGGACCACAAAGAAACACCCAGCGGCAGCATTAATACCTCTCATAACTCCATATCAAATCTTGGACATCAGAACAAGACATTTTTAGAAAAAGGCTTCATCAAGGGGTCTTTGGTTAgtttcttagcttcctaaagtgGTTTCCACATTATTGTAGAATTACTACTACTTATAAACTTTAATGGTGCCCCCAGATGGACAGGCCATAGAACTAGGTTCTGaggttaacttttttttttttctaacagtgtaGGTAGTCACTGCTGAATATTTGGTCAGGCtggaaatgtgtttataatgtaaaGTGAGTTTCAGGATAGCTGCATATACTTTTGCTGAAGAATTAAGAGAGTACAATTATTAATGTTGTCATTTTGATGGTGTGTAAATTTtatattgttcatttttggCACTGAACTACATTACAAAAGCAAACAATGTTTTCTCATGGTAATGACTTAAACTTTGCTTTGTAAAAGGTGTTGAtggtaaacattttaataaaaaaaaacaattccaaAT

Function

NR:

description
kunitz-type U19-barytoxin-Tl1a-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026918866.2 True 1273 mRNA 0.39 6 16045575 16048154

Neighbor

gene id symbol gene type direction distance location
trnav-aac_18 NA coding upstream 4328 16041175 ~ 16041247 (+)
neil1 neil1 coding upstream 31420 16009837 ~ 16014155 (+)
commd4 commd4,LOC107576274,LOC107757759,LOC107598913 coding upstream 36752 16005670 ~ 16008823 (+)
stra6 stra6 coding upstream 65330 15968543 ~ 15980245 (+)
LOC113530122 cyp11a,LOC108442685,LOC106561846 coding upstream 140246 15897676 ~ 15905329 (+)
usp3 usp3,LOC107659494 coding downstream 930 16049084 ~ 16060168 (+)
fbxl22 fbxl22 coding downstream 12934 16061088 ~ 16066983 (+)
LOC113529940 LOC108275177 coding downstream 44918 16093072 ~ 16106147 (+)
si:ch211-112g6.4 sh2d7 coding downstream 122090 16170244 ~ 16174834 (+)
lrrc61 lrrc61,LOC107752319,LOC107598843 coding downstream 154621 16202775 ~ 16206450 (+)
G149428 NA non-coding upstream 17556 16027607 ~ 16028019 (+)
G149427 NA non-coding upstream 19063 16024844 ~ 16026512 (+)
G149276 NA non-coding upstream 227207 15771838 ~ 15818368 (+)
G149268 NA non-coding upstream 290663 15754665 ~ 15754912 (+)
G149248 NA non-coding upstream 333658 15711013 ~ 15711917 (+)
G149552 NA non-coding downstream 206530 16254684 ~ 16255314 (+)
G149574 NA non-coding downstream 280102 16328256 ~ 16328539 (+)
LOC117597940 NA non-coding downstream 290436 16338590 ~ 16341963 (+)
G149722 NA non-coding downstream 391552 16439706 ~ 16440054 (+)
G149723 NA non-coding downstream 397885 16446039 ~ 16449140 (+)
LOC113529564 ano9,LOC108442698 other upstream 222984 15807990 ~ 15822591 (+)
svip svip other upstream 320484 15721278 ~ 15725091 (+)
slc5a12 slc5a12 other upstream 392891 15563306 ~ 15652684 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 other upstream 2216244 13790973 ~ 13829331 (+)
ces2b LOC108275184 other upstream 2268704 13761334 ~ 13776871 (+)
G150589 LOC108274445 other downstream 1786083 17834237 ~ 17842535 (+)
tmem17 tmem17,znf774,LOC107678976 other downstream 2134400 18182554 ~ 18184033 (+)
rfwd3 rfwd3,LOC107754982 other downstream 2626856 18675010 ~ 18683428 (+)
urahb LOC108274538 other downstream 2673441 18721595 ~ 18724686 (+)
nfat5a LOC108274760,LOC108428435 other downstream 2699673 18747827 ~ 18796259 (+)

Expression


Co-expression Network