dapk2b (dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496)


Basic Information

Item Value
gene id dapk2b
gene name dapk2,dapk2b,LOC107752317,LOC107757761,LOC107659496
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 16121657 ~ 16140904 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026918885.2
CGTGCACTCAAGCGAAGGCAGTTACTCTGTTAAGAAGCGCGAGCGGTTCGGCGGCGCTTCACATGTACACCCGGGCACCGAGTGCACACCCGCGGCTAGTATACTACCACTAAAAAAGTGCACAAAGCATCTCTGTTCCTACACTGACGAGGGCAACTCGCTGGAGCTGCAGGCCTGTTTATGTGCTCAAATTTAATGAAGATTTAATCGTCATCAATGAGGACATTGAGCATGGCTGTGTTCAAGCAACAGAAAGTGGAGGATTTTTATGAAATTGGAGAGGAGCTTGGAAGtgGGCAGTTTGCTATAGTGAAGCGTTGTAAGGAAAAGAGTACAGGTGTAGAGTATGCAGCAAAGTTCATAAAGAAGCGCCAAAGCAGAGCGAGCAGAAGAGGAGTGCGGCGAGAAGAAATTGAAAGGGAGGTGAACATTCTACAGCAACTCCAGCACCCCAACATAATCTCACTGCACGATGTCTACGAGAACCGCACCGATGTGGTGCTCATACTGGAACTGGTATCTGGAGGAGAGCTCTTTGACTTCCTGGCCCAAAAGGAATCCCTGAGTGAGGAGGAGGCCACTGAGTTTCTTAAACAGATTCTTGATGGGGTCCACTACCTGCACTCcaaaaaaattgcacattttGATTTAAAGCCCGAGAATATTATGCTGCTAGACAAAAATGTCCCACTGCCACGGATCAAACTTATTGACTTTGGCTTGGCACATAAAATTGAAGATGGGGTCgaattcaaaaatatttttggtacACCCGAATTTGTGGCTCCAGAGATAGTCAACTATGAGCCTCTGGGATTGCCAGCAGACATGTGGAGTATTGGTGTCATCACATACATCCTACTGAGCGGTGCTTCCCCATTTCTGGGCGAGTCCAAACAAGAGACACTGGCAAACATTTCCGCAGTGAGCTATGAATTTGATGAGGAATTCTTCAGCAGCACTAGCGAGCTGGCTAAGAGCTTCATTAGACAGCTTCTGACACAAGACACAAGAAAGAGGCTCACAATAGAAGGGGCTCTCAACCACCCTTGGATAAAGcCTAAGGACTGTAGACAAGCTCTGGTGCGCAGACAGTCTGTGGTCAACATTGAGAATTTTAGAAGACAGTACGCTCGCCGTAGGTGGAAGTTCTCTTTCAGGATTGTAGCTCTGTGTAACCATTTGACACGTATGATGAAGAAACCACAAGGCAGTCCAAAAGAGGTCCAAGAGGCCATTTTTGCAAGGGACTGTGAGAGCGACCAGGAAGAGGAAGTATTACAAAGGAGACCGAGGACCAGGAAGAGGAGCAGCACCTCCTGAAGCTCCACAGGTTCTTCCAGCACAGAACAACGCATCTGCAGTAGGCAATAAGACACCAATCTCAAACACACTGATGTGAAAGAGTCCAGGATGTGTCTTTTACAGACATTTACCCCTTAAAGAAAGAGGGACTGAGCCATGGTTAGAGTAAATATGCCTTGGACACATTAAAACATACAGTGATGTAAAATGATTCAGTGAGTGCCAATACTGTGATATTAAAATAGTGTGTTTTTAAAGCTGTGCAATTAATTGATGAATATAAGGGGGTAAGTTAGATTTTACATGTGCTTATAATGCCTATGAGTGCAATGTTAACTTGAACAGTGTCTTGATCTCTCTGAAATTCTCCCTTTTTTAAGTGCTATAACCTTCCAGTCTCCTGTTTTACATGATCCTGTTGTCTTAATATGTGCCATGATATTTTGCGTATGGACTGTCATCCTGTAACCTactagtaaatgtaaataacatttcCAATAGCAAATATTTGTATACAAATTTGATGCACATGTTTGtatcatgtatgtatgtatgtatgtatgcatgtataaattaaacatgatgTGAGCTGGTGAGGTGACGGTCAGCTACAAGAGGGAATATTTTcttatacattttaaagttaaaggtCAGTGAACAAGATTTGTCAGCCGTGAATTGTGAATTTTTCATAGTGTTTATAGACTTGAACTGTCTTATAATTAATTGctttaatgaaaatgttatCCATATTTTTGTAATCAGGGCAAAATATATGCTACCTCAGAACACACTTTGAGGAAAAATTGTCACACTGGTATAGATTTGTGGGGTATTCCAGAATCTGCTTTTAGTCATATAGTTGTACTGAAAAAACAGGTCCCCACCCTGTACTAGTGCAGTAACAATGGTCAAGTGACGTCAAATTTGTTGTTGTAACACCTGTTGTAACAcctgttgtttttccataaggTATATTACACATGCTGC
>XM_026918886.2
ACTCAAGCGAAGGCAGTTACTCTGTTAAGAAGCGCGAGCGGTTCGGCGGCGCTTCACATGTACACCCGGGCACCGAGTGCACACCCGCGGCTAGTATACTACCACTAAAAAAGTGCACAAAGGTAAGAAAGAAAGCATCTCTGTTCCTACACTGACGAGGGCAACTCGCTGGAGCTGCAGGCCTGTTTATGTGCTCAAATTTAATGAAGATTTAATCGTCATCAATGAGGACATTGAGCATGGCTGTGTTCAAGCAACAGAAAGTGGAGGATTTTTATGAAATTGGAGAGGAGCTTGGAAGtgGGCAGTTTGCTATAGTGAAGCGTTGTAAGGAAAAGAGTACAGGTGTAGAGTATGCAGCAAAGTTCATAAAGAAGCGCCAAAGCAGAGCGAGCAGAAGAGGAGTGCGGCGAGAAGAAATTGAAAGGGAGGTGAACATTCTACAGCAACTCCAGCACCCCAACATAATCTCACTGCACGATGTCTACGAGAACCGCACCGATGTGGTGCTCATACTGGAACTGGTATCTGGAGGAGAGCTCTTTGACTTCCTGGCCCAAAAGGAATCCCTGAGTGAGGAGGAGGCCACTGAGTTTCTTAAACAGATTCTTGATGGGGTCCACTACCTGCACTCcaaaaaaattgcacattttGATTTAAAGCCCGAGAATATTATGCTGCTAGACAAAAATGTCCCACTGCCACGGATCAAACTTATTGACTTTGGCTTGGCACATAAAATTGAAGATGGGGTCgaattcaaaaatatttttggtacACCCGAATTTGTGGCTCCAGAGATAGTCAACTATGAGCCTCTGGGATTGCCAGCAGACATGTGGAGTATTGGTGTCATCACATACATCCTACTGAGCGGTGCTTCCCCATTTCTGGGCGAGTCCAAACAAGAGACACTGGCAAACATTTCCGCAGTGAGCTATGAATTTGATGAGGAATTCTTCAGCAGCACTAGCGAGCTGGCTAAGAGCTTCATTAGACAGCTTCTGACACAAGACACAAGAAAGAGGCTCACAATAGAAGGGGCTCTCAACCACCCTTGGATAAAGcCTAAGGACTGTAGACAAGCTCTGGTGCGCAGACAGTCTGTGGTCAACATTGAGAATTTTAGAAGACAGTACGCTCGCCGTAGGTGGAAGTTCTCTTTCAGGATTGTAGCTCTGTGTAACCATTTGACACGTATGATGAAGAAACCACAAGGCAGTCCAAAAGAGGTCCAAGAGGCCATTTTTGCAAGGGACTGTGAGAGCGACCAGGAAGAGGAAGTATTACAAAGGAGACCGAGGACCAGGAAGAGGAGCAGCACCTCCTGAAGCTCCACAGGTTCTTCCAGCACAGAACAACGCATCTGCAGTAGGCAATAAGACACCAATCTCAAACACACTGATGTGAAAGAGTCCAGGATGTGTCTTTTACAGACATTTACCCCTTAAAGAAAGAGGGACTGAGCCATGGTTAGAGTAAATATGCCTTGGACACATTAAAACATACAGTGATGTAAAATGATTCAGTGAGTGCCAATACTGTGATATTAAAATAGTGTGTTTTTAAAGCTGTGCAATTAATTGATGAATATAAGGGGGTAAGTTAGATTTTACATGTGCTTATAATGCCTATGAGTGCAATGTTAACTTGAACAGTGTCTTGATCTCTCTGAAATTCTCCCTTTTTTAAGTGCTATAACCTTCCAGTCTCCTGTTTTACATGATCCTGTTGTCTTAATATGTGCCATGATATTTTGCGTATGGACTGTCATCCTGTAACCTactagtaaatgtaaataacatttcCAATAGCAAATATTTGTATACAAATTTGATGCACATGTTTGtatcatgtatgtatgtatgtatgtatgcatgtataaattaaacatgatgTGAGCTGGTGAGGTGACGGTCAGCTACAAGAGGGAATATTTTcttatacattttaaagttaaaggtCAGTGAACAAGATTTGTCAGCCGTGAATTGTGAATTTTTCATAGTGTTTATAGACTTGAACTGTCTTATAATTAATTGctttaatgaaaatgttatCCATATTTTTGTAATCAGGGCAAAATATATGCTACCTCAGAACACACTTTGAGGAAAAATTGTCACACTGGTATAGATTTGTGGGGTATTCCAGAATCTGCTTTTAGTCATATAGTTGTACTGAAAAAACAGGTCCCCACCCTGTACTAGTGCAGTAACAATGGTCAAGTGACGTCAAATTTGTTGTTGTAACACCTGTTGTAACAcctgttgtttttccataaggTATATTACACATGCTGC
>XM_026918887.2
CGTGCACTCAAGCGAAGGCAGTTACTCTGTTAAGAAGCGCGAGCGGTTCGGCGGCGCTTCACATGTACACCCGGGCACCGAGTGCACACCCGCGGCTAGTATACTACCACTAAAAAAGTGCACAAAGCATCTCTGTTCCTACACTGACGAGGGCAACTCGCTGGAGCTGCAGGCCTGTTTATGTGCTCAAATTTAATGAAGATTTAATCGTCATCAATGAGGACATTGAGCATGGCTGTGTTCAAGCAACAGAAAGTGGAGGATTTTTATGAAATTGGAGAGGAGCTTGGAAGtgGGCAGTTTGCTATAGTGAAGCGTTGTAAGGAAAAGAGTACAGGTGTAGAGTATGCAGCAAAGTTCATAAAGAAGCGCCAAAGCAGAGCGAGCAGAAGAGGAGTGCGGCGAGAAGAAATTGAAAGGGAGGTGAACATTCTACAGCAACTCCAGCACCCCAACATAATCTCACTGCACGATGTCTACGAGAACCGCACCGATGTGGTGCTCATACTGGAACTGGTATCTGGAGGAGAGCTCTTTGACTTCCTGGCCCAAAAGGAATCCCTGAGTGAGGAGGAGGCCACTGAGTTTCTTAAACAGATTCTTGATGGGGTCCACTACCTGCACTCcaaaaaaattgcacattttGATTTAAAGCCCGAGAATATTATGCTGCTAGACAAAAATGTCCCACTGCCACGGATCAAACTTATTGACTTTGGCTTGGCACATAAAATTGAAGATGGGGTCgaattcaaaaatatttttggtacACCCGAATTTGTGGCTCCAGAGATAGTCAACTATGAGCCTCTGGGATTGCCAGCAGACATGTGGAGTATTGGTGTCATCACATACATCCTACTGAGCGGTGCTTCCCCATTTCTGGGCGAGTCCAAACAAGAGACACTGGCAAACATTTCCGCAGTGAGCTATGAATTTGATGAGGAATTCTTCAGCAGCACTAGCGAGCTGGCTAAGAGCTTCATTAGACAGCTTCTGACACAAGACACAAGAAAGAGGCTCACAATAGAAGGGGCTCTCAACCACCCTTGGATAAAGcCTAAGGACTGTAGACAAGCTCTGGTGCGCAGACAGTCTGTGGTCAACATTGAGAATTTTAGAAGACAGTACGCTCGCCGTAGGTGGAAGTTCTCTTTCAGGATTGTAGCTCTGTGTAACCATTTGACACGTATGATGAAGAAACCACAAGTATCTGTATTGTGGTGAACAGGGCAGTCCAAAAGAGGTCCAAGAGGCCATTTTTGCAAGGGACTGTGAGAGCGACCAGGAAGAGGAAGTATTACAAAGGAGACCGAGGACCAGGAA
>XM_026918888.2
CGTGCACTCAAGCGAAGGCAGTTACTCTGTTAAGAAGCGCGAGCGGTTCGGCGGCGCTTCACATGTACACCCGGGCACCGAGTGCACACCCGCGGCTAGTATACTACCACTAAAAAAGTGCACAAAGCATCTCTGTTCCTACACTGACGAGGGCAACTCGCTGGAGCTGCAGGCCTGTTTATGTGCTCAAATTTAATGAAGATTTAATCGTCATCAATGAGGACATTGAGCATGGCTGTGTTCAAGCAACAGAAAGTGGAGGATTTTTATGAAATTGGAGAGGAGCTTGGAAGtgGGCAGTTTGCTATAGTGAAGCGTTGTAAGGAAAAGAGTACAGGTGTAGAGTATGCAGCAAAGTTCATAAAGAAGCGCCAAAGCAGAGCGAGCAGAAGAGGAGTGCGGCGAGAAGAAATTGAAAGGGAGGTGAACATTCTACAGCAACTCCAGCACCCCAACATAATCTCACTGCACGATGTCTACGAGAACCGCACCGATGTGGTGCTCATACTGGAACTGGTATCTGGAGGAGAGCTCTTTGACTTCCTGGCCCAAAAGGAATCCCTGAGTGAGGAGGAGGCCACTGAGTTTCTTAAACAGATTCTTGATGGGGTCCACTACCTGCACTCcaaaaaaattgcacattttGATTTAAAGCCCGAGAATATTATGCTGCTAGACAAAAATGTCCCACTGCCACGGATCAAACTTATTGACTTTGGCTTGGCACATAAAATTGAAGATGGGGTCgaattcaaaaatatttttggtacACCCGAATTTGTGGCTCCAGAGATAGTCAACTATGAGCCTCTGGGATTGCCAGCAGACATGTGGAGTATTGGTGTCATCACATACATCCTACTGAGCGGTGCTTCCCCATTTCTGGGCGAGTCCAAACAAGAGACACTGGCAAACATTTCCGCAGTGAGCTATGAATTTGATGAGGAATTCTTCAGCAGCACTAGCGAGCTGGCTAAGAGCTTCATTAGACAGCTTCTGACACAAGACACAAGAAAGAGGCTCACAATAGAAGGGGCTCTCAACCACCCTTGGATAAAGAACCATGAGCATGTGGAAGACACCAGCTTAATTCAGAGGCAAAGTGGACCATGTCAGCTGAAGACCAAACGCCTGAAGGAGTATACCATCCACTCCCACTGCAGCATTCCACCTAATAACACATACATAAACTTTGAGCGCTTTTCCAGTGTGATGGAGGACATCACCCTCATAGATTGCGGCCTGGAGGAAGTGGCCCAGAAACGAGAGTCTCTTCAGGAGGACGTTGAAGCTCTTCTTTCCATCTATAATGAAAAGGAGGCCTGGTACAGAGAAGAAAGTTCGAGTGTGGGACAGGGCCTCTCACAGCTCCGTTATGAGTTCCGTAAGGCAGAGGCTCGGAGGAAGGATCTTCAGGAGGATATAAAGGCTACAGAAGCCAGCCTGGACATCATCAGCAGCCGCTACTTGGAAAGACAGGCCCAGCTAAGCTCTCTTAGTGAGGAGCTGAACACAGAGCTGCGATGGCTTCAGGAACTGATGAGTTCCCTATATGGAGAGGTGGAGAATGGAGGACGTTGCTCCACTCCTGATCTCAACAACCAAGTGAATGAAGCTCTGAAGGAGATGTTGAGCAGAACCTGTGAAGAAGAATCACACTGCAGCAGCCAGACAGACAACACAGAGTCATTCTTTTAAATACATGTTCCTCATGCGATTTCCATATTTTCTTATGGCAATTCCTCAAATTCAGATGAAATATCCTAATATATGAATACTGTACTGGGCAATACATAACTTTTCCTTTTCACATAGAGtatatgttttttccccctttttttaaagtcagttaagtaaattcttttatttaaagtagcTCTACATTAAGTCTAATAATTTTTGTGCAGTATTTCTGTTAGGAGTGTTAGGGATTTACTTATCCcatacttttatttttgataCAATATTGATATCCGAGCTACTGAATTGACCTCAATACAGACTTCATTCACTTGTATAATTAGAAGAACTATCTAAAAAGCTACTTGACTTTGTATGAAAATTCTGTTTCAATTTCAGAAACATTCATGGCATGTACAGAAATATGTCAAATTTAGTCCTGTAATGATCTAGAATTTCAGGGCAATGTTAGTCTAATACTGAGTGTCGGTGTGTCTGTAGTTATACTGATATATTGTCCATTGTCTCATTCAAATATTGTTTAATTCCTAAGATGAACGTAAGTAAGTTGCCTCAATTTCTTGAGAAACACGTATATATTGCATAGACTGTATGTTACTTTCAGCACTTTTAAAGCAGTTTTAGTATTTATaatgatgttaaatatttatactgtttatttatttctgccaACACAGGTACttcttcaattttatttaatattaaataatttaataagtgGCTCATGTGGGTGCAGAGAAAAAATAGTTAaggattatttgtttattactaGTTGTGATTTCTTTCTATTTGAACCATTACTTGTAAATCACtaatatgataataaataagataataaaaaaaaaggagagtaaTCACAGCTTTTAACTTTTCTGTGCCACGGATCACTGTCTGCTTTTCTACTGATAAAGATCATTTCCGTCAGGTTTAGCTCagactttttactgtatttactgcATTCTGTGatgacaggaaatgaaaaatgaataccGCAGGTTATACCAGTATTTACTGTTGGTGACATTTGTGCAGTTCATAATCTGTCCTGTGAAATTTTCTATGCTGATactgttattaaatgttaaatggagTCTAATCTCAGTCCtccatgatataaaaaaaaactaatcattTGGTCTATAATTTCATGAGCTGTTTctgtcattt

Function

symbol description
dapk2b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human DAPK2 (death associated protein kinase 2).
dapk2 Enables ATP binding activity; calmodulin binding activity; and identical protein binding activity. Involved in several processes, including anoikis; positive regulation of granulocyte chemotaxis; and regulation of intrinsic apoptotic signaling pathway. Located in Golgi apparatus.

NR:

description
death-associated protein kinase 2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026918885.2 False 2295 mRNA 0.42 12 16121657 16140904
XM_026918886.2 False 2303 mRNA 0.42 12 16121657 16140899
XM_026918887.2 False 1326 mRNA 0.47 12 16122648 16140904
XM_026918888.2 True 2868 mRNA 0.41 10 16123400 16140904

Neighbor

gene id symbol gene type direction distance location
ca12 ca12 coding downstream 77805 16028155 ~ 16043852 (-)
man2c1 man2c1,LOC107752311 coding downstream 96799 16014920 ~ 16024858 (-)
sema7a sema7a coding downstream 116294 15997889 ~ 16005363 (-)
ccdc33 ccdc33 coding downstream 185079 15904320 ~ 15936578 (-)
pkp3a LOC108275089 coding downstream 256955 15848138 ~ 15864702 (-)
tbc1d2b tbc1d2b,LOC107698183,LOC102789207 coding upstream 692 16141596 ~ 16165999 (-)
cib2 cib2,LOC103027299,LOC107752320,LOC107573330,LOC104917862 coding upstream 40013 16180917 ~ 16199115 (-)
rps27l rps27l,zgc:136826,LOC107598918,LOC107752326 coding upstream 95239 16236143 ~ 16238157 (-)
LOC113530180 LOC108274564 coding upstream 110440 16251344 ~ 16254496 (-)
LOC113529693 LOC108274564,LOC108433637,LOC108441836,LOC107750517 coding upstream 115606 16256510 ~ 16262939 (-)
G149495 NA non-coding downstream 26482 16093072 ~ 16095175 (-)
LOC113529609 NA non-coding downstream 28727 16068429 ~ 16092930 (-)
G149366 NA non-coding downstream 217755 15903692 ~ 15903902 (-)
G149364 NA non-coding downstream 219015 15902440 ~ 15902642 (-)
G149363 cyp11a non-coding downstream 223496 15897890 ~ 15898161 (-)
G149631 rps27l,zgc:136826,LOC107598918,LOC107752326 non-coding upstream 40002 16180906 ~ 16238108 (-)
LOC117597941 NA non-coding upstream 89710 16230614 ~ 16231809 (-)
G149643 NA non-coding upstream 108257 16249161 ~ 16251085 (-)
G149649 NA non-coding upstream 113743 16254647 ~ 16255486 (-)
G149632 klf13,znf746,LOC108274922,LOC107550220,LOC107598847,LOC107752329 non-coding upstream 168986 16309890 ~ 16317926 (-)
islr2 islr2,LOC107662462 other downstream 129563 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 402082 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 892672 15219970 ~ 15228985 (-)
dynlrb2 dynlrb2,LOC103025073,LOC106573385 other downstream 1033597 15086113 ~ 15088060 (-)
G148647 fjx1 other downstream 1308952 14810004 ~ 14812705 (-)
acsbg1 acsbg1 other upstream 215 16141119 ~ 16228334 (-)
LOC113529460 nrg4 other upstream 912449 17053353 ~ 17058906 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 2063747 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 2162238 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 2163734 18304638 ~ 18304801 (-)

Expression


Co-expression Network