gpr22b (gpr22,LOC108428781,LOC107754326,LOC107561157,LOC107701065,LOC107676451)


Basic Information

Item Value
gene id gpr22b
gene name gpr22,LOC108428781,LOC107754326,LOC107561157,LOC107701065,LOC107676451
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 15164565 ~ 15170707 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026919509.2
agagagagagtaggagTGGGGTGAGAGTGTGCAACAGCGTGCTGGGGTAGATGAGCcaagctttcacacacacgctgacaCACACCACAGCGTGAAGAGCGAAGCAGAGATAGAGAGGGcaatgtgtgttcatgtgtatatgtgtgtaagcGAGAAGAAGAGAGATAGAAAGCAGGCATAAGGAGGACAGGACAAGAAAGTGTGAGGACTGCCTGTGTTTGCCTGTGTATTCTCATTTTCTTGGCACTCTTGACCATTCAGATGATGAAAGGAATATGAATGTTTAATGCTCCTGTCCAGGGCAACTCTGGAAACCTCAGGGAAATACCATAGTGAAACCCTCAAGCAACATAATTCCTTTGACACCACTTGGGATTTGTAAGATTCTTAGGAAACGGGTACCTGCTGGGACTCCCTTTACATTAGAGGCATCTGGAGAAATGGAGCTGAAAGGGAATGTGCTTTTGAGGCAATACTTGGTCCACACAAGCACCAGTCCAATACCTTGTGGAAATTTGCCAAGACAGGACCCATGGCAATAGGACTCATCACTTATCCTTTGTATAAGTTGACTGTCCATAAGGCATATGAATCCAGTTTGCTCAGTGGATCTTATGCTGGAGATGGGAAATGTCATTATTtacatgaacaaacaaaacagtggcatgaaataaatgactaaatgcaCTTCAGTAGAAGGAGATGGATTTATTATTCACCACAGCAATGACAAAATCTGGATTTATGGGCTACTGTTAACAAGGGGGATGAAAGTCCCCCCTCCATAGACACATAACCGCTCATAAGGGCTGACCTCACCAATACTGTGACCTTGGTTTCCTCGGTGGAGGCTTATGTAAATCAACAACAGCAAATCAATAAGGACTTATCACCGTGCTTGGTCCATAAAATCTTAATTATGGGAATACAGTGCAGCCAACAGAAAGGCACATTGATATAGGGCAGGGTCATTTGAATCCTATGAATAACTGGAAGCATCTGAAGCTTTTAAGactgttatttttaaacctgaagtggatGTATTAATAgatcaacacatcaactttgctCCGAATCATTCCAAACGATCCACTGGATTTCCTTTATGGGTTTTAGTACTGTATCTAATTGCATGAAACTGGGACAAAAAGGGGTTTCTAAATGGGAGAAATATAGGACAGTTTTATCTATGACCCACAGGGAATGTGGATACTGGCCTATTACTGTTAAACCAGAACATGGCTGTGGCCCAAGGGTTGCAATCagtttgataaaaaaataaagaagtgcCAACCTATTGTGGAAACCAGGAGATGTGAATTCCCTGCTGGACTGCAAggattacaaaaggtgcaaaacTCTCCTTTGAAAATGCCTGGGTGTGATGTTCAACTTGGACTCCACCCAGACTCTTCCGGGCCAACCACAGGCTGTGgatactgagagagacagagctctgGAGAGGGGATAATGCACAAGCCTATCCCTTCAGCACAGGAGGAAGAAGGCACCATGAGTAACGTTACAGTCTTGGACATCACTGAGACCGTAAGCCCTGCCATGACGGCGGACGAACCTCACCCCTACCCCCTCAGCTTCCAGGTCTCCCTGACCGGCTTCCTGATGCTGGAGATAGTGCTGGGCCTGAGCAGCAACCTCACTGTGCTCGTCCTGTACTGCATGAAGTCCAACCTGGTCAACTCTGTTAGCAACATCGTGACCATGAACCTGCACGTGCTCGATGTGCTGGTGTGCGTATGCTGCATCCCCCTGACCATTGTTGTGCTGCTTCTCTCACTTCAAGGTGACACTGTGCTGGTCTGCTGCTTCCATGAGGCCTGCGTGTCCTTCGCTAGCGTGGCTACGGCAGCAAATGTGCTAGCCATCACACTCGACCGCTATGATATCTCTGTCAAACCAGCCAATCGTGTGCTGACCATGGGCCGAGCGGTGGCTCTGTTGGGGGGTATCTGGGTGCTATCTTTTCTTAGTTTCCTGGTGCCCTTCATTGAGGTGGGCTTCTTAGGACCAGAGCCAACCAAAGCCAACCAGACTGCTGTAGTGCACGTTAACGAGTACTACACAGAGTTAGGCCTGTATTACCACCTGGTTGCACAGATCCCTATCTTCTGCTTCACTGCTGTGGTCATGCTGGTCACTTACTCTAAAATCCTGCAGGCGCTGAACATCCGCATCGGAACACGCTTCCATGCctcacagaagaagaagaagatgcgATGGAAAAAGAACATCTCACTCATGTCGTCCTCACAACAGCAGCTGCCTGAAGTCGCAGATGGCTCTCAGGGCAGCAGTGGGAACCGTAATGTGCCACTGGGCATGAGAACCTCAGTGTCTGTGATCATTGCTCTGCGGCGAGCTGTGAAACGCCACCGCGAGCGGCGGGAGAGACAGAAGCGGGTGTTCCGCATGTCACTCCTTATCATCTCCACTTTCCTGCTGTGCTGGACCCCTATTACTGTTCTAAACAGCATCATCCTCAGCACAGGCCCCAGTGACCTCAATGTAAAGCTGCGTCTGGGCCTTCTGGTCATGGCGTATGGAACAACAGTCTTCCATCCGCTCCTGTACGCTTTCACGCGGCAGAAATTTCAAAAGGTTCTAAAAAGTAAGATGAAAAAGCGGGTGGTGTCCATCATCGAGACAGATCCAATGCCCACCAATTCAGTCATAAAAAACTCATGGATTGATccaaagaggaataaaaaagtgACATTCGAGGATCATGAAGCCAAACAAAAGTGTCTATCGTCTGAGGATGTTGACTAAGTACCAGTACTTGCAGGAACACCAGTACACATTGTAGCCTCAAAAACTGAACTTTTAAAATCTTCATTATGGTCATAGTGGAAAGAGACTGACTCAAGTGTGTGCTACAGATGGAACTGCTTCAGATGTGAATATATGAATTAATATcagtttattactatttatatgAACTTCAGATTTAGTATAATAGTATGACATTCACTGTGCTGTTgaaaactgcatgtttttataacactgtatatataattcaataattgagatgtgtatatacacacataaaatactgtatgtatcgATATTAGAATACATAGGCAACACATACAagtatttgtaataaattagGCAAAAAGATGTTTCTGGGGTTCAACACACATATAACTGCTGCTctgtccagcagagagcagctcaCCTTTGACCCTTGCTGATGTAATACCACTTTTATGGCCCATCGTTTTATTACATTGTCCCCCTTTGTGTTCTTCTCTTGAACTAGCAAGTTAACTATGAACAAACACAGTTAGTTGTAGCAAAAAAGGCAAGCAAGCGAACATCACTTGAGCATCAACTAATTGGCATTATGCCTTACACCAAGTGCCTTGAGAGCAAGGGAAATGCCTGGTTTGTTTCAACACTGCAGAATGTAAAAGGAGACTGGACAGTCATTCACCTTATTTTCCACACAGACAATATGCTCTTCTGTTCAAGGACATTGCTGTGTTCAGTACACAAACTCGGGTTTTCTTTCCAATATTGAAGGGCATCCAGGCTCAGTAAAAGAGCTTAATTTAGGATAGCCTCCACATCAATATTACAGTAAGCCATGTGGCACTGGCTTGTCCTGCATCACACAGGGGAAGATCAATGTTAAACAGGCAGTGGAGGCTTAAATTTACAGCTGTCCATCCCAGAGGCATAaattatgggggaaaaaattcaaTCATCAATTTCCATCAACCAAAGGCATGTCTGTTTAagatttttgtctgtttttcataCACAGACACCCAGATGAGAACTGTTTCTCACTACTGCGGGGGGCCATTTCCTATTTTTTGAGCCCAGCTGTTTAATGTGCGGGAGCATTGCACATCTAATAAAATGCCTGAGCTCCCTGTCTGATCAAGGTCActtttgttttgacagccaAAACTGTAATAAGGAATTCAACCCAGCCAGCATGGCCCCTATTGACTTTCATAATGTTTGGCTTTTCAGAGCAATCAAAAAAGGTCATTAGCACAAAGTCAGCTCCCTGCTTCatgtttatagagctttagttttAAATGTCAGATGCAGCTCCTGTCTTGCTCATTTTAACTTAAACAGGGAAGAAGAACAAGAGATTGAACATATTTGATTACGGCTGGTTCGCATGTGTAAGCGTGGACATGTGTGAAACCAAGTGAGCGAGGGAATGTGTGATGTTGTGTGATTGTTCTGTGCTGCGTGTGGGAGTGTGGGAGCGCATCTGACAGATTTAATGGATGATAACAGAAGTGTTATACAGGTGGAGTAAAGTGGGACGCTGCCCTGTAACTCTTTGCATCTCATTACATTCGAGTCTTTCTACTATCTCTGTCTTGCTGCCATTATATTAgattattgaattgaatttatttgccttttttggACTAATTAGTACTTTG

Function

symbol description
gpr22 Enables G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: probable G-protein coupled receptor 22

GO: NA

KEGG:

id description
K04319 GPR22; G protein-coupled receptor 22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026919509.2 True 4436 mRNA 0.44 3 15164565 15170707

Neighbor

gene id symbol gene type direction distance location
golt1bb golt1bb,LOC108275057,LOC108428784,LOC107676462,LOC105895666 coding downstream 15283 15145412 ~ 15149282 (-)
pthlhb LOC108274596 coding downstream 46787 15116022 ~ 15117778 (-)
LOC113529696 LOC108274568,LOC108428736,LOC104940688,LOC106573136,LOC103380577,LOC102196233 coding downstream 49700 15113679 ~ 15114865 (-)
cib1 cib1,LOC100536377 coding downstream 65651 15094752 ~ 15098914 (-)
LOC113529649 LOC108275035 coding downstream 120727 14996107 ~ 15043838 (-)
hbp1 hbp1,LOC107701066,LOC107754327 coding upstream 23611 15194318 ~ 15199670 (-)
LOC113530066 prkar2b,LOC108275286,LOC107676465,LOC107732287 coding upstream 29308 15200015 ~ 15217057 (-)
irx5b LOC108275041 coding upstream 111151 15281858 ~ 15285227 (-)
rpgrip1l rpgrip1l coding upstream 214381 15385088 ~ 15405178 (-)
hsd17b2 LOC108275401 coding upstream 278035 15448742 ~ 15452712 (-)
G148919 slc25a3,LOC107569351,LOC107754323 non-coding downstream 26558 15136126 ~ 15138007 (-)
G148920 LOC108275086 non-coding downstream 32068 15130776 ~ 15132497 (-)
G148926 LOC108275086,LOC108428785,LOC106523631,LOC105938579,LOC107388471 non-coding downstream 36059 15127232 ~ 15128506 (-)
G148833 NA non-coding downstream 127103 15037225 ~ 15037462 (-)
G148612 pdhx non-coding downstream 481812 14681515 ~ 14682753 (-)
G148992 NA non-coding upstream 160500 15331207 ~ 15331432 (-)
G149057 NA non-coding upstream 206496 15377203 ~ 15377406 (-)
G149301 NA non-coding upstream 554544 15725251 ~ 15725901 (-)
G149305 fancf non-coding upstream 580452 15751159 ~ 15752470 (-)
G149312 NA non-coding upstream 587577 15758284 ~ 15758501 (-)
dynlrb2 dynlrb2,LOC103025073,LOC106573385 other downstream 76505 15086113 ~ 15088060 (-)
G148647 fjx1 other downstream 351860 14810004 ~ 14812705 (-)
LOC113529512 NA other downstream 1328810 13825782 ~ 13835755 (-)
trnar-acg_1 NA other downstream 1374020 13790287 ~ 13790545 (-)
syt8 LOC108275171,LOC103035847,LOC108428822,LOC107742052,LOC107595270,LOC107675261,LOC107549275,LOC107758745 other downstream 1699349 13457100 ~ 13465216 (-)
LOC113529695 NA other upstream 49263 15219970 ~ 15228985 (-)
LOC113529470 LOC108275326 other upstream 541286 15711993 ~ 15719575 (-)
islr2 islr2,LOC107662462 other upstream 810457 15981164 ~ 15992094 (-)
acsbg1 acsbg1 other upstream 970412 16141119 ~ 16228334 (-)
LOC113529460 nrg4 other upstream 1882646 17053353 ~ 17058906 (-)

Expression


Co-expression Network