LOC113530148 (hyal4,LOC108436916,LOC108181664,LOC107573489,LOC107752304,LOC107753633)


Basic Information

Item Value
gene id LOC113530148
gene name hyal4,LOC108436916,LOC108181664,LOC107573489,LOC107752304,LOC107753633
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 17846961 ~ 17860347 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026919939.2
GTTCACATACTGGGGACACAGAAAGGGCCATGTAACGTGCGCCCAGGGCAGTGGTGCTGAAACAGACTTGCAGAAACTTCGAGATGCTTGACAGTTCTCTTTGCTGAGTCAGAAAGCAGGATGCCCTGTGTGCCCTGCGGGGCCTTGCATCAAGCCCTGCCTGTTGCTTGTGCCCTTGTGCTCTCCTGGCTATTACTCTTGGTCCATGCTGCATTCAGCCAGAAACCTGCCAAGCTGCCCCTGGTGGGCCGCAAGCCATTCTTGGCTGCATGGAATGCACCACTTGACTTGTGTGCCCTCAAATACAACATGAACATCAATCTGGACCTTTTTCACATTAGTGGCAGTCCACGAGCTGTTCATACAGGCCAGGATGTCACCATCTTCTATCCAAACCGTCTGGGTTACTATCCATTCTATACAGAGCAAGGTGAGGCCGTGAATGGAGGCCTTCCTCAGAACTGCAGTCTGGAAGCTCACCTCAGCAAAGCTAGCAAAGACATTGCACACTTCATTCCCTCAGAAGATTTCCAAGGCCTAGCCGTCATCGACTGGGAGTATTGGAGGCCACAGTGGAGCCGCAACTGGGAGAAGAAAGACATCTATCGAAAACGCTCACGTGAACTTGTCTCCCGAGCATATGTCAATGTGACAGAAGATCAGATAGAGGAACTGGCACGTCTACGCTTCGAAAAGAGTGCTATGGCATTTATGCAGGGAACACTGGAGCTTGGCACACGTGCTCGACCAAAAGGCCTATGGGGCTTCTACCTATATCCAGACTGCCATAACTACAATGTGCACATGCACAATTACAGTGGCTACTGCCCCATGCTGGAGAGTGTCCGCAATGATGAACTGCTCTGGTTGTGGAACAGCAGTACAGCACTCTTCCCTGCAATGGCTATCCGTAGAGGCCACATGGACAGCATTCGCAACCTGCACTTCTGCCAGAACAGGGTGCTGGAGTCTCTAAGGCTTGCTTCCATGACCTCACTGCCCTACGAGCTGCCCACTTTTGTGTACACACGGCTCGGTTACAGAGATGAAGCCATGACCTTCCTAACACAGAAGGATTTAATGCACACAATAGGGGAAAGTGCTGCTTTAGGTGCTGCAGGCTTTGTGATCTGGGGTGACCTTAACCTCACATCTTCTAGACAAAACTGCTCCAGGGTAAGAACATTTTTGAGCTACAGACTGGGCCAGTACATCACCAATGTGACCCGGGCAGCTGAAGTGTGCAGTGAATATCTGTGCCAGTCCAACGGTCGTTGCGTACGGAGAGACCCACGGGCACCGCATTTCTTGCACCTGAGCCGCAGCAGCTACCGCATCCTCTCACACCGCAATGGCACATTCACAGTCACTGGTTGGCATTCCCAGCATGAACTACAACAACTGGCAGAAAGGTTCCACTGCCACTGTTATGAAGGGTATGAGGGTGAGCGCTGTGACAGTACAGAGCCAACGCACACAGCAgatgaggagaaagagaaggaggtggaggaggaagaagggGATCGAGGGGCAGAGAGCTCCGCTGAGTCTGTAGGAAATGCCTTTGCCCTGGTGGTGCTGCTCATTCTGTTTACCTTTAGCTGTATTTAAAACACTGTGGCACAGCTATCCAATGGCACATGTAGTGACCAGTGTTTGTATGcagacactttttattttatgtaggcATGCTATAGGTTGATATCACTTGAAGAAACAGGAAAATAGTCAATGACTATAGTTTACTTACATTTACTgttatgtcagtgtttttacCTGATATCATCTACCTTTCTTGTACTTCTACTTGTTAAAATGTTAGCCTTGTTTGCACAAACCGTAGTACTTGCTTACATAATTTACTATAGTAACCCTACAATATTAAACTAAGCAAATATTGTTTATCTGAGAAGTTTTTTTGACTGAAATTCGCCATCTATATAGCTCTTAATAATGCACATATATGGTTAATAAGGTTGCATTCCACACGCCACTTGCTGATGACCCCAAAGTTACTGATTGACCCTTGGCTCATCATTgtaagaatgcaaaaaaaaaaaaagtagtcttaGAGAGGCCATATTAAAAAAGCACTTAATTAATCCTCTCTGTTGTGTGACTAGTTTGATTGCCACttcataagacaaaaatgtagtAAGTGATTTATCTAAAGTTATCTAATGTCCAGTAAtccaataataattacaaaacagCTTCTCAGTTTAAACTAGACATAAGgttttttaattgctttacCTACCTACATGGGAAAAGaagaataatgtattttttaaagtaaactaTCACAATCTCATTTACCTGAAAAATACATACACTTCAAGTCATATGctaattcattttcagttcttGTTTCATCAACCCATATCACTTGAAAATATTACCAAAAAGCATGGTACAAGACAACCTGAATGTtagacaaatgtaaatataaatcttttGCAAAGTTTTTTATAAATCCTGAAAAGAGGAAAACTGGATAATCTCTAgctttgtaattattttttttaaacttagtACTCTTTGAATGtttctaaatatatatagacAAACTGCATAATCACCACAAACCATTCACAAACATTACTACCTTACTTATTCCAGTACTAAAATGTAGcctatttttgcattttcttttgaaaCCAAGCACAGCAATGTTATCAGAAACAGAGGAATTAATGCATATACCTCATTTTGAGTCATTTTTCTCAACTTTTCTGAATGTCAATTTCTACAATACCACACAAATCACTATGTAGAACATACTAAAGATGTTTGGATGATGCCTGATTGTTATAATCCATTAACTTCATAAccacataaaataaacaaaatattgtcaA
>XM_026919940.2
TGTTCACATACTGGGGACACAGAAAGGGCCATGTAACGTGCGCCCAGGGCAGTGGTGCTGAAACAGACTTGCAGAAACTTCGACTCAACATCAACAGTTGCTGAGAGTGAGCTTAACGGCTGCGAAGACCAACTGTTTCGTTCTACTACTGGTTGGCTAACTGAGCAGAAATTGTAATTGGACAAAAAGACACATTCGGTTTTAATTTTGGGTCTGGAAAATCTCCACCTTGTGCTAAAATAAGTGCCACTGTTGGGCCAACTCCATCTCATTCATCTCTAATCCTGTCCCTGTCCTTGCTCACAGGATGCTTGACAGTTCTCTTTGCTGAGTCAGAAAGCAGGATGCCCTGTGTGCCCTGCGGGGCCTTGCATCAAGCCCTGCCTGTTGCTTGTGCCCTTGTGCTCTCCTGGCTATTACTCTTGGTCCATGCTGCATTCAGCCAGAAACCTGCCAAGCTGCCCCTGGTGGGCCGCAAGCCATTCTTGGCTGCATGGAATGCACCACTTGACTTGTGTGCCCTCAAATACAACATGAACATCAATCTGGACCTTTTTCACATTAGTGGCAGTCCACGAGCTGTTCATACAGGCCAGGATGTCACCATCTTCTATCCAAACCGTCTGGGTTACTATCCATTCTATACAGAGCAAGGTGAGGCCGTGAATGGAGGCCTTCCTCAGAACTGCAGTCTGGAAGCTCACCTCAGCAAAGCTAGCAAAGACATTGCACACTTCATTCCCTCAGAAGATTTCCAAGGCCTAGCCGTCATCGACTGGGAGTATTGGAGGCCACAGTGGAGCCGCAACTGGGAGAAGAAAGACATCTATCGAAAACGCTCACGTGAACTTGTCTCCCGAGCATATGTCAATGTGACAGAAGATCAGATAGAGGAACTGGCACGTCTACGCTTCGAAAAGAGTGCTATGGCATTTATGCAGGGAACACTGGAGCTTGGCACACGTGCTCGACCAAAAGGCCTATGGGGCTTCTACCTATATCCAGACTGCCATAACTACAATGTGCACATGCACAATTACAGTGGCTACTGCCCCATGCTGGAGAGTGTCCGCAATGATGAACTGCTCTGGTTGTGGAACAGCAGTACAGCACTCTTCCCTGCAATGGCTATCCGTAGAGGCCACATGGACAGCATTCGCAACCTGCACTTCTGCCAGAACAGGGTGCTGGAGTCTCTAAGGCTTGCTTCCATGACCTCACTGCCCTACGAGCTGCCCACTTTTGTGTACACACGGCTCGGTTACAGAGATGAAGCCATGACCTTCCTAACACAGAAGGATTTAATGCACACAATAGGGGAAAGTGCTGCTTTAGGTGCTGCAGGCTTTGTGATCTGGGGTGACCTTAACCTCACATCTTCTAGACAAAACTGCTCCAGGGTAAGAACATTTTTGAGCTACAGACTGGGCCAGTACATCACCAATGTGACCCGGGCAGCTGAAGTGTGCAGTGAATATCTGTGCCAGTCCAACGGTCGTTGCGTACGGAGAGACCCACGGGCACCGCATTTCTTGCACCTGAGCCGCAGCAGCTACCGCATCCTCTCACACCGCAATGGCACATTCACAGTCACTGGTTGGCATTCCCAGCATGAACTACAACAACTGGCAGAAAGGTTCCACTGCCACTGTTATGAAGGGTATGAGGGTGAGCGCTGTGACAGTACAGAGCCAACGCACACAGCAgatgaggagaaagagaaggaggtggaggaggaagaagggGATCGAGGGGCAGAGAGCTCCGCTGAGTCTGTAGGAAATGCCTTTGCCCTGGTGGTGCTGCTCATTCTGTTTACCTTTAGCTGTATTTAAAACACTGTGGCACAGCTATCCAATGGCACATGTAGTGACCAGTGTTTGTATGcagacactttttattttatgtaggcATGCTATAGGTTGATATCACTTGAAGAAACAGGAAAATAGTCAATGACTATAGTTTACTTACATTTACTgttatgtcagtgtttttacCTGATATCATCTACCTTTCTTGTACTTCTACTTGTTAAAATGTTAGCCTTGTTTGCACAAACCGTAGTACTTGCTTACATAATTTACTATAGTAACCCTACAATATTAAACTAAGCAAATATTGTTTATCTGAGAAGTTTTTTTGACTGAAATTCGCCATCTATATAGCTCTTAATAATGCACATATATGGTTAATAAGGTTGCATTCCACACGCCACTTGCTGATGACCCCAAAGTTACTGATTGACCCTTGGCTCATCATTgtaagaatgcaaaaaaaaaaaaagtagtcttaGAGAGGCCATATTAAAAAAGCACTTAATTAATCCTCTCTGTTGTGTGACTAGTTTGATTGCCACttcataagacaaaaatgtagtAAGTGATTTATCTAAAGTTATCTAATGTCCAGTAAtccaataataattacaaaacagCTTCTCAGTTTAAACTAGACATAAGgttttttaattgctttacCTACCTACATGGGAAAAGaagaataatgtattttttaaagtaaactaTCACAATCTCATTTACCTGAAAAATACATACACTTCAAGTCATATGctaattcattttcagttcttGTTTCATCAACCCATATCACTTGAAAATATTACCAAAAAGCATGGTACAAGACAACCTGAATGTtagacaaatgtaaatataaatcttttGCAAAGTTTTTTATAAATCCTGAAAAGAGGAAAACTGGATAATCTCTAgctttgtaattattttttttaaacttagtACTCTTTGAATGtttctaaatatatatagacAAACTGCATAATCACCACAAACCATTCACAAACATTACTACCTTACTTATTCCAGTACTAAAATGTAGcctatttttgcattttcttttgaaaCCAAGCACAGCAATGTTATCAGAAACAGAGGAATTAATGCATATACCTCATTTTGAGTCATTTTTCTCAACTTTTCTGAATGTCAATTTCTACAATACCACACAAATCACTATGTAGAACATACTAAAGATGTTTGGATGATGCCTGATTGTTATAATCCATTAACTTCATAAccacataaaataaacaaaatattgtcaA
>XM_026919941.2
ACTGGGGACACAGAAAGGGCCATGTAACGTGCGCCCAGGGCAGTGGTGCTGAAACAGACTTGCAGAAACTTCGAGTAGAAATTACAGGCTGCACCACACTGCTCACACGGAGACACATGCAGCAACTAACTTCCCTCATCCTTTTGAACCTGGCTGGGTTGTGTTTTTCAGCAGCTCCTCCTCCAACAGCAGCTCCACTTTTCACTAGGCCGTTTGTGGTCATATGGAATGCCCCCATCTACAGATGCAATCAACTGCAGGTGCCACTGGATTTGGATGTGTTTCAGGCCGTCACCACACCAGCCAAAGTCCCGAACCAAACACTGACTCTCTTCTACAAAAATCGAATAGGGCTCTTTCCTTACACAGACGTTAAAACTTTGACACAGTACAATGGTGGCATTCCACAGAAGGGAAACCTAAATGCCAGTCTGCAAAAAGCCAAAAAAGAGTTCAACCAGTACATTCCATCATCCATACCTGGCCTGGCTGTCCTGGACTGGGAGGAGTGGTTTCCTTTGTTTGACAGAAATGCAGACTTAAGAGAGATCTATAAGGCGCTATCCATAAACTACACCCTTCAACAGAATCCATCCCTCACAAGCAAACAAGCTACAGTGAAAGCCAAAGAGCAATTTGAGAAAGCTGCCAGAAGTTTCATGGAAGAAACGTTGAAGTTAGGAATCTCACAAAGACCAAATTTTCTCTGGGGCTTTTATTTGTTTCCTGACTGCTACAACTACGATTTTGAGAAACCAAGCTATACAGGGAGATGCTCTCAGACCACAATACAGTTAAATACTGAACTTCTCTGGATGTGGGAGGCAAGCACCGCCCTCTTCCCATCAGCATACATGCCTGTTTCTATAAGTGGAACCCAGAAAGCAGCGCTATTCATCCGAAACCAGGTGCTAGAGGCGATGAGAGTCGCAGATATGCCTCAGCGGCCCTACACTGCACCTATTTATTTGTACCTGCGACCCCATTTGCTGGAACAGAAAGAGCAATACATGCAAGAGGTTGATCTGATTCGGAGTATTGGTGAGAGTGCAGCTCTGGGGGCTGCTGGATGTGTGCTATGGGGATCTAGCTATGATTTTAATGACAAGGCATCATGTGAATCCCTTTCTGCCTACTTGTCTAacacactaaataaatacatcatcaaTGTTACAACTGCGGCTGAACTGTGCAGTGACCTGCTGTGTCAAGGCAATGGGCGCTGTGTCCGTAAAAGCTATGACTCAGACGACTATCTACACCTCAACATAAGCAGCTTTAATATACAGAAGATTGATGGGATGTATAACGTCACTGGGGAACCTTCTATCACCGACCTCACTGCCTGGGCTGACAAGTTCACCTGTCAGTGCTATGAGGACAAGAAATGCACAGCTCAAATTCCCTCCGGATTTGAGTATAGTGATAGAAGTGTCACTGGACACCTGACAGTACTGCTTGCTGCATATCTGCTAGGTGAATTGTCATAGTTTTCAAGAAagtcacacattttacactgaatgaaatgaggAAATAAACCTTCTGGAGAATTCAAATCAACATCTTAAGAACACTCATTTCCTCCTGTCCCGAATCCTGCaattataaatgactgcattCCACTGATTACCTGTGATGTTTCATCTTTAGCCACATCTATATTAGTAATTTGTAAAggttcatgtttttttacatGACTGAAGTAAATGTCTACTGCTACATAAATAATGTACAgtgaacataataataatttactgcAGAATATATAGTGCTTTGGCTTGGCCATTCCAGGACATAGAACTTCTTACTATTAGCTTATATTATATCCAGTTACAATCGCAAAGCAGCTGCCTCAACACTGGTGTGTGCCGTGGGGCTCTAGCTATGATTTTAATGACATGGCAATGACTTGTGTTTTTATAAAGCATATTAGTTTTTAATTCCATTTTCTTTACAAAACAAGATTTTTTGCTCTTTAACATCTGACTCAACCCATCAGCTGCAGTAATTAACACAGTGCTTAATGAGGTTAAAATGGTTCTGTTGGAGCTGGGAATAAGCCAATATGTAGTCCTACACTGCAGAGGCATCCAAGAACTTGATTAAGAAAAATATGCAATAGTAATGTAGTCCAATATTTGTGGAGTTTTATGCTTaatttttattcacaatatgtATTGTTTCCTCTGATGTACAATGGGgctcatttaaaattggaaataaacagaaggttttagaattttaaaattttaaaaacaaagaaagtaaatgttcaata

Function

symbol description
hyal4 Predicted to enable hyalurononglucosaminidase activity. Predicted to be involved in hyaluronan catabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be active in cytoplasmic vesicle. Orthologous to human HYAL4 (hyaluronidase 4).

NR:

description
PREDICTED: hyaluronidase-4 isoform X2

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004415 hyalurononglucosaminidase activity molecular_function

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026919939.2 False 2861 mRNA 0.43 4 17851638 17860346
XM_026919940.2 True 3085 mRNA 0.43 4 17851638 17860347
XM_026919941.2 False 2278 mRNA 0.42 4 17846961 17860338

Neighbor

gene id symbol gene type direction distance location
LOC117597889 LOC108274445 coding downstream 4397 17840112 ~ 17842564 (-)
LOC117598082 LOC108274445 coding downstream 11518 17833113 ~ 17835443 (-)
LOC113530008 hyal4,LOC108274447,LOC108274446 coding downstream 15192 17827480 ~ 17831769 (-)
LOC113529452 NA coding downstream 86922 17754384 ~ 17760039 (-)
dldh dld,dldh coding downstream 286138 17554092 ~ 17560823 (-)
asb15a asb15 coding upstream 54266 17914613 ~ 17921521 (-)
ptprz1a ptprz1,LOC108274749 coding upstream 252659 18113006 ~ 18164810 (-)
agbl2 agbl2 coding upstream 323764 18184111 ~ 18202625 (-)
lrrc10 lrrc10 coding upstream 355886 18216233 ~ 18218741 (-)
washc4 kiaa1033,si:dkey-23p11.2,LOC107696292,LOC107678984 coding upstream 367766 18228113 ~ 18245704 (-)
G150551 NA non-coding downstream 87262 17759421 ~ 17759699 (-)
G150495 grm8b non-coding downstream 147877 17698687 ~ 17699084 (-)
G150469 NA non-coding downstream 191172 17655589 ~ 17655789 (-)
G150463 NA non-coding downstream 195081 17651673 ~ 17651880 (-)
G150459 NA non-coding downstream 200016 17646733 ~ 17646945 (-)
G150631 NA non-coding upstream 52293 17912640 ~ 17912855 (-)
G150776 NA non-coding upstream 251905 18112252 ~ 18112477 (-)
G150834 NA non-coding upstream 394728 18255075 ~ 18255418 (-)
G150854 NA non-coding upstream 440946 18301293 ~ 18302959 (-)
G150875 NA non-coding upstream 445862 18306209 ~ 18306443 (-)
LOC113529460 nrg4 other downstream 788055 17053353 ~ 17058906 (-)
acsbg1 acsbg1 other downstream 1618627 16141119 ~ 16228334 (-)
islr2 islr2,LOC107662462 other downstream 1854867 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 2127386 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 2617976 15219970 ~ 15228985 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 344304 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 442795 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 444291 18304638 ~ 18304801 (-)
parp6b parp6,parp6b,LOC108275327,LOC108436940,LOC107661437,LOC107753615,LOC107598827,LOC107665100 other upstream 493627 18353974 ~ 18364036 (-)
G150991 LOC108436944 other upstream 564972 18425319 ~ 18428973 (-)

Expression


Co-expression Network