fabp10b (LOC108274544)


Basic Information

Item Value
gene id fabp10b
gene name LOC108274544
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 115546 ~ 127338 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034307532.1
tgtgtgtgttgagcagGACGTGTGTGGTGAGGTTCTCTCCTGTCATGGCTGTGGATTTTAGCGGAACGTGGCAGATGTACGAGCAGGGAGACCCTGAGGAGTTCCTCGAAGCTGTGTctgtacCACACCTAATTGGAAAGATAATGAGGGAAGTGAAGCCCTTAATGATTATAAAACAAACTGGTGATGACTTTGTGATCTCGATTAAAACGCCCCTGCGCACAAACACCAACTCGTTCACCATCGGCAAAGAGAGCGAATTCACCACCATGGACGGAGTGAAGACCCGGGCTACAGCACAAAGGGTTGATGGGAAAATTATCATAGATACAGAAAAAGTCACACACATGCGTGAGATCCAGGGAGAGGAAATGGTTGAGACTCTCAGAGCTGGCTCTGCAACCCTGGTCAGAAGATACAGGAGGACTTGAAGCACACATAggctg

Function

NR:

description
PREDICTED: fatty acid-binding protein, liver-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034307532.1 True 446 mRNA 0.49 4 115546 127338

Neighbor

gene id symbol gene type direction distance location
LOC113525374 LOC108274795 coding upstream 610 102820 ~ 114936 (+)
gpd1c gpd1c,LOC108274829,LOC107714772,LOC101473153,LOC106522873,LOC107377235,LOC101155171,LOC102800075 coding upstream 26708 67609 ~ 88838 (+)
LOC113525382 gja9 coding downstream 370 127708 ~ 133407 (+)
LOC113525100 LOC108274824 coding downstream 196808 324146 ~ 329984 (+)
LOC113525101 NA coding downstream 310689 438027 ~ 444448 (+)
LOC113523903 LOC108274807 coding downstream 1335107 1462445 ~ 1473080 (+)
LOC113523877 NA coding downstream 1369135 1496473 ~ 1505004 (+)
G141549 NA non-coding upstream 10866 47927 ~ 104680 (+)
G141558 NA non-coding upstream 42970 64691 ~ 72576 (+)
G141546 NA non-coding upstream 69742 45246 ~ 45804 (+)
G141533 NA non-coding upstream 81257 33604 ~ 34289 (+)
G141601 NA non-coding downstream 9203 136541 ~ 139266 (+)
G141625 NA non-coding downstream 62491 189829 ~ 190245 (+)
G141641 NA non-coding downstream 75803 203141 ~ 203683 (+)
G141642 NA non-coding downstream 78293 205631 ~ 205865 (+)
G141643 NA non-coding downstream 79987 207325 ~ 260961 (+)
G141566 LOC108274831 other upstream 19486 93086 ~ 96060 (+)
G141647 NA other downstream 85610 212948 ~ 235521 (+)
G141823 LOC108274854 other downstream 546894 674232 ~ 742201 (+)
G141824 LOC108274854 other downstream 639717 767055 ~ 895584 (+)
LOC117598023 LOC108274854 other downstream 740331 867669 ~ 869091 (+)
G141825 LOC108274854,LOC108279645 other downstream 811377 938715 ~ 1209873 (+)

Expression


Co-expression Network