LOC113529452


Basic Information

Item Value
gene id LOC113529452
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 17754384 ~ 17760039 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003403060.1
AAGGAAACAAAGAAAGTGCAGCTCGTGATGCAGGCTGAGCAGTAGAAGTAAACGCACAGGGGCCTATCCTGGGACTGGAACTTGAGTTGAGATCAAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003403060.1 True 101 ncRNA 0.49 3 17754384 17760039

Neighbor

gene id symbol gene type direction distance location
dldh dld,dldh coding downstream 193561 17554092 ~ 17560823 (-)
parp16 parp16,LOC107589319,LOC107595248,LOC107662480 coding downstream 299306 17448608 ~ 17455078 (-)
apba2a LOC108275011,LOC106584731 coding downstream 319947 17424907 ~ 17434437 (-)
duox duox1,LOC108436899,LOC107712499,LOC106561775 coding downstream 334181 17405410 ~ 17420203 (-)
tjp1b LOC108274984,LOC108414298 coding downstream 365443 17323198 ~ 17388941 (-)
LOC113530008 hyal4,LOC108274447,LOC108274446 coding upstream 67441 17827480 ~ 17831769 (-)
LOC117598082 LOC108274445 coding upstream 73074 17833113 ~ 17835443 (-)
LOC117597889 LOC108274445 coding upstream 80073 17840112 ~ 17842564 (-)
LOC113530148 hyal4,LOC108436916,LOC108181664,LOC107573489,LOC107752304,LOC107753633 coding upstream 86922 17846961 ~ 17860347 (-)
asb15a asb15 coding upstream 154574 17914613 ~ 17921521 (-)
G150495 grm8b non-coding downstream 55300 17698687 ~ 17699084 (-)
G150469 NA non-coding downstream 98595 17655589 ~ 17655789 (-)
G150463 NA non-coding downstream 102504 17651673 ~ 17651880 (-)
G150459 NA non-coding downstream 107439 17646733 ~ 17646945 (-)
G150424 NA non-coding downstream 155190 17598788 ~ 17599194 (-)
G150631 NA non-coding upstream 152601 17912640 ~ 17912855 (-)
G150776 NA non-coding upstream 352213 18112252 ~ 18112477 (-)
G150834 NA non-coding upstream 495036 18255075 ~ 18255418 (-)
G150854 NA non-coding upstream 541254 18301293 ~ 18302959 (-)
G150875 NA non-coding upstream 546170 18306209 ~ 18306443 (-)
LOC113529460 nrg4 other downstream 695478 17053353 ~ 17058906 (-)
acsbg1 acsbg1 other downstream 1526050 16141119 ~ 16228334 (-)
islr2 islr2,LOC107662462 other downstream 1762290 15981164 ~ 15992094 (-)
LOC113529470 LOC108275326 other downstream 2034809 15711993 ~ 15719575 (-)
LOC113529695 NA other downstream 2525399 15219970 ~ 15228985 (-)
fnbp4 fnbp4,LOC107753624,LOC107678983,LOC107573585 other upstream 444612 18204651 ~ 18214487 (-)
etfbkmt etfbkmt other upstream 543103 18303142 ~ 18305329 (-)
LOC113530223 NA other upstream 544599 18304638 ~ 18304801 (-)
parp6b parp6,parp6b,LOC108275327,LOC108436940,LOC107661437,LOC107753615,LOC107598827,LOC107665100 other upstream 593935 18353974 ~ 18364036 (-)
G150991 LOC108436944 other upstream 665280 18425319 ~ 18428973 (-)

Expression


Co-expression Network