trnaa-agc_7


Basic Information

Item Value
gene id trnaa-agc_7
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 7634498 ~ 7634570 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnaa-agc_7
AGGGGATTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTAGCGGGATCGATGCCCGCATCCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-agc_7 True 73 tRNA 0.58 1 7634498 7634570

Neighbor

gene id symbol gene type direction distance location
trnaa-agc_6 NA coding upstream 14489 7619937 ~ 7620009 (+)
trnaa-agc_5 NA coding upstream 19921 7614505 ~ 7614577 (+)
trnaa-agc_4 NA coding upstream 22656 7611770 ~ 7611842 (+)
trnaa-agc_3 NA coding upstream 25385 7609041 ~ 7609113 (+)
atp10b atp10b coding upstream 60269 7536335 ~ 7574229 (+)
atp7a atp7a,LOC101485317 coding downstream 11758 7646328 ~ 7672282 (+)
sowahab LOC108274591 coding downstream 39971 7674541 ~ 7678733 (+)
gdf9 gdf9 coding downstream 46016 7680586 ~ 7685537 (+)
LOC113529727 LOC108274528 coding downstream 154405 7788975 ~ 7797755 (+)
zgc:92242 LOC108275394 coding downstream 180673 7815243 ~ 7832568 (+)
G144665 NA non-coding upstream 56121 7578128 ~ 7578377 (+)
G144661 NA non-coding upstream 57710 7576060 ~ 7576788 (+)
G144568 NA non-coding upstream 59007 7575108 ~ 7575491 (+)
G144523 NA non-coding upstream 213678 7418761 ~ 7420820 (+)
G144486 NA non-coding upstream 367583 7239003 ~ 7266915 (+)
G144715 NA non-coding downstream 51178 7685748 ~ 7688153 (+)
G144726 NA non-coding downstream 69511 7704081 ~ 7704763 (+)
G144782 NA non-coding downstream 381090 8015660 ~ 8018082 (+)
G144891 NA non-coding downstream 408525 8043095 ~ 8043297 (+)
G144903 NA non-coding downstream 479091 8113661 ~ 8114545 (+)
gabra6a gabra6,LOC108275227,LOC107554706,LOC107684829 other upstream 167946 7447870 ~ 7466552 (+)
trnaw-cca_12 NA other upstream 677982 6956445 ~ 6956516 (+)
trnaw-cca_11 NA other upstream 681625 6952802 ~ 6952873 (+)
trnaw-cca_10 NA other upstream 683076 6951072 ~ 6951422 (+)
LOC117598156 NA other upstream 835594 6796972 ~ 6798904 (+)
G145233 LOC107676291 other downstream 1206906 8841476 ~ 8842266 (+)
si:ch73-233f7.1 si:ch73-233f7.1,LOC108274507,LOC107660897,LOC107588310,LOC107596359,LOC107754489,LOC108430952 other downstream 2902681 10537251 ~ 10547929 (+)
LOC113529865 LOC108275059,LOC107660898,LOC106604817 other downstream 2919796 10554366 ~ 10595601 (+)
hrh2a LOC108274475 other downstream 3660558 11295128 ~ 11306318 (+)
atp6v0e1 va0e1,atp6v0e1,LOC106612155 other downstream 3960929 11595499 ~ 11597970 (+)

Expression


Co-expression Network