clocka (clock,LOC107701480)


Basic Information

Item Value
gene id clocka
gene name clock,LOC107701480
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 4248330 ~ 4309929 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU343070
TTTGTAACTCCAGTCAATCCAACGCAGGCGTCTGAACCAAAACAAGGAGCGCGAGATCCCCTCATGACGGCGAATAAACTGGGTGACAACACTAATCTGAGGACCTAGGCAAAAAGGAATCATTTCTGAAGTCATGACCTAAGACGAGTTTGCTGCTGACATGCGGTACATGTGCGCTCACCCTCCTTGGAAAACATTCAGATGCTACAGGGACCCACAGCACACTTGTGATCATTTTAAACCACAGCCTCTCTCCGATTTCTCAAAGCTCTCCTTACTACACGTGAAAAACTGACGCAAATCCACACTGACTCACAGCCCAAGTGGATTGTGGTGGACTTCATCCTGAGACGAGCTCCTCATTCTCACTTTGCGCGCAGGACTGGAGGTTGGTTTGGCTTCAAAATGAAACCGAGGCCACGTTCAGACCTGGTATCAACACCTGTCTCAGGTGATCTGGCGATCTGATTACAGGTGGACAGCTGAGACGGATAGCCATTAACACCTATTTTCATGCATCTTGAACGCTTCTCCAGTGATCATTTGTGATTGTTCTTCTTGAATAACATAGCTGACCAGGAGGTTCTTTAAAGTTATCAGTGAGGTGGGtagtaacaatttacattttgtactgttattattacatttagcTTTTATCTGACACACTACACGTTTTACTTGTACGTATTCTCACCACATTCCGTCCGTCTTGTGGCCACATTTATAAAAACCCCTTTTTTGTCATAGCAGATGACTTCCAAAGttgaaaataattaaacttTCCAGAAGAAATGCTGACAGacatcaagctttttttttttttaatcagcaagGCACTCTGGGTAGCAGTttttctgaaagtttttttttttaaatccatattTAGGCTTAAGCTCC
>XM_034313929.1
atgttagAGTATGTGTCCTTTAAAATGAAACAGGAGACTGACTGCGCCgctaaagttgttttttttcccgtattgtttaaataaaagctaGTTTGTCGTTTGACACGACGTTAAAATATCCTCCTCGCGCTACAatgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgccagaTTGTGTAGGCTGCTTCTGCTGCTGCCGCTTAGTGTgcagtgcgcatgcgcgtgGGAAGCCCAGGGTAGGCCCTGCTGTTTTTGTAACTCCAGTCAATCCAACGCAGGCGTCTGAACCAAAACAAGGAGCGCGAGATCCCCTCATGACGGCGAATAAACTGGGTGACAACACTAATCTGAGGACCTAGGCAAAAAGGAATCATTTCTGAAGTCATGACCTAAGACGAGTTTGCTGCTGACATGCGGTACATGTGCGCTCACCCTCCTTGGAAAACATTCAGATGCTACAGGGACCCACAGCACACTTGTGATCATTTTAAACCACAGCCTCTCTCCGATTTCTCAAAGCTCTCCTTACTACACGTGAAAAACTGACGCAAATCCACACTGACTCACAGCCCAAGTGGATTGTGGTGGACTTCATCCTGAGACGAGCTCCTCATTCTCACTTTGCGCGCAGGACTGGAGGTTGGTTTGGCTTCAAAATGAAACCGAGGCCACGTTCAGACCTGGTATCAACACCTGTCTCAGGTGATCTGGCGATCTGATTACAGGTGGACAGCTGAGACGGATAGCCATTAACACCTATTTTCATGCATCTTGAACGCTTCTCCAGTGATCATTTGTGATTGTTCTTCTTGAATAACATAGCTGACCAGGAGGTTCTTTAAAGTTATCAGTGAGGTTCATGTACAAATGTCTACCTCACGCTTAAAGCTCCTCTGTGTCCCACTGCAGCCCTGATCACATttcaaaatgacctccagcataGACCGgGATGACAGCAGTATCTTTGATGGACTGATGGAAGAAGATGAGAAGGACAAAGCAAAACGAGTTTCCAGGAACAAGTCGGAAAAGAAGAGGCGAGACCAGTTCAATGTGCTCATCAAGGAGCTGGGCACCATGCTGCCTGGCAACACCCGCAAGATGGACAAATCCACCATTCTGCAGAAAAGCATTGACTTCCTGCGCAAGCACAAAGAAATTGCAGCACAGTCGGAGTCCAGTGAGATTCGTCAGGACTGGAAGCCTCCGTTCCTCAGCAACGAGGAGTTTACACAGCTGATGTTAGAGGCCCTAGATGGCTTCTTTCTAGCCATTATGACAGACGGCAACATAATCTACGTGTCTGAAAGTGTCACCTCTTTACTAGAGCATTTACCAtctgaCCTGGTGGACCAGAACCTGTTGAATTTTCTTCCACTGGGAGAGCACTCTGAAGTGTACAAAGCCCTCTCAACACACATACTCGAAGGAGAGAGCCTCACACCAGACCACTTAAAGACAAAAAACCAGTTAGAGTTCTGCTGCCACATGCTCCGGGGCACCATCGACCCCAAAGAGCCTCCCGTCTACGAGTATGTAAAGTTTATCGGAAACTTCAAGTCTCTCAACACTGTGCCTAACTCGACACGGAACGGCTTTGAAGGTGTGATCCAGCGCTCGCTCAGGCCCTCGTTTGAAGACCGCGTGTGTTTCATTGCCACTGTGAGGTTAGCCAAGCCTCAGTTTATCAAGGAGATGTGCACTGTGGAGGAACCCAATGAGGAGTTCACTTCCAGACACAGCTTAGAGTGGAAATTCCTTTTCCTGGAccacagGGCGCCCCCTATCATAGGTTACCTGCCTTTCGAAGTTTTGGGCACATCGGGGTATGATTACTATCACGTAGATGACTTGGAGACCCTTGCCAAGTGCCATGAACACCtGATGCAGTATGGGAAAGGGAAGTCGTGCTATTATCGGTTCTTGACCAAAGGCCAGCAGTGGATTTGGCTGCAGACTCACTACTACATCACCTACCACCAGTGGAACTCGCGGCCTGAGTTCAttgtctgcacacacactgttgtcAGCTATGCTGAGGTTAGGGCTGAGCAGCGCAGAGAGCTGGGCATCGAGGAGTCACCTCCTGAGATCTCTGCAGACAAGTCTCAAGACTCGGGCTCTGAGTCTCAGTTGAACACCTCCAGCCTGAAGGAGGCACTGGAGCGCTTTGATCAGAGTCGCACGCCCTCAGCCTCCTCCCGGAGCTCACGGAAGTCCTCCTCACACACCGCCGTTTCCGACCCCACCTccACCCAGACAAAGCTACAGACAGAGCACAGTACGCCGCCCCGCCAATCTGTCTCTACTATTGAAAAGACTTCTCAGCGCCGATCATCCATCAGcagccagTCGATGAGCTCTCAGAATACGAGCCAGACGATGGCAGCTTGTCTGGTGTCTCAGCCTCAGCAGCCACAGCAGCTGCAGCCTACtgtgcagccAGTGCTACAGTTCTCCACACAGCTGGATGCCATGCAGCACCTGAAGGAACAGCTGGAGCAGCGCACGCGTATGATCGAGGCTAACATCCAGAGGCAGCAAGAGGAGCTGCGTCAGATTCAGGAGGAGCTGCAAAGGGTGCAGGGCCAGGGCTTACAGatgttccTGCAGCAAGGTGGCGGTAGTCTGAACCTTGGCTCGGTGCAGTTAGCGCAGGGTTCCTCGGTGCAGCCAGGCACGGCTCTGACCATGCAGGGGCTGGTGGTGCCTGCAGGAATCTTACAAGGCAACCTGGCATCAACACATACGGGCACACAGCACTCTGTCACTCAGCAGACCCAGCCAGCTCAGCCTCAGCAGCAGAGCATTCTCCGAGAGCAgagtggcacacacacacagTCCCAGAGATCGTCGCACACACTGCAGTCTCCTCAGGGAGCCCTGCCTGCGTCTCTCTACAACACCATGATGATTTCACAGCCTGGTCAGGCCAACGTGGTGCAGATCTCCACCAGTTTAACCCAGAGCAGTCCGAGTGGAACCGCAGTCGCCACCTTCTCTCAGGACCGCCAGATACGATTCCCAGCAGCCCCTCAGCTCCTTACTAAGTTAGTGACGGGGCCTATGGCATGTGGCGCCGTCATGGTGCCCACCACCATGTTCATGGGTCAGGTGGTGACACCGTTTGCCCCTCAGCAGAGTCAAAATCAGACCATCAGCATTGGACAGCAAGCACCCACACCCTCGCAGGAGCAGCAGGGCCAGACGCAGGCCGGCACACAACCACAGAGCCAAAACCAGACTCCACTTAGCCAGACTCAGTTCCTCCAGGCACCTCGTCTTCTTCATGGGAATCAGTCAGCGCAGCTGATCCTCCAGGCAGCGTTTCCTCTCCAGCAGCAGAACGCCTTCGCCGCAACcacacaacagcagcagcaggtgcagcagcagcagctccaaCAGCAACATCAGCACCAACAGCAGCTtcagcatcagcagcagcagcagcagctggctTCTCATAGGCCAGACAGCATGTTGGACCGCTCCAATGCCCCGCCTCAGTAACCCGGCACCAGCCAATTGCGTGGCGAGGACCGAATCTGACCTCTGTTGTGCAGGGCGACGAAGGACGAGTATTTGCAGTATTCAAACTGTACCTGTTATTTGGCGCAAAGCAAAAGGTGCTGTTGTGTCTCTGCGCCCTACATGTCATCCCTCACCAAGTTCTGGATGCTTGCACTGAATTCTGGGAAGCATAGCCCACACTGGCTGAGTGGTTAGTAAGCTAGCAAGGGAGCccttggtttattttttaccaACCGAATCAAGATAAGAGGCAAGGCAAGTTGTGAGGTGGGCCGTctttcattcacacattcacatattaaTTTATGTAGAACGCTCCAGTTTGTGGACTGGAGGTGATTCAAGACTTCAGAGAAGTCCTGTAGGACAAATGGCACCACATCCATTTGTTCTTCTCCATTCATATCCTCCCTTCCCTGCTCTCTTCTTTTCATCTTTGTGTtttccatgtaaaaaaaaaaaaaaaaa
>XM_034313930.1
atgttagAGTATGTGTCCTTTAAAATGAAACAGGAGACTGACTGCGCCgctaaagttgttttttttcccgtattgtttaaataaaagctaGTTTGTCGTTTGACACGACGTTAAAATATCCTCCTCGCGCTACAatgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgccagaTTGTGTAGGCTGCTTCTGCTGCTGCCGCTTAGTGTgcagtgcgcatgcgcgtgGGAAGCCCAGGGTAGGCCCTGCTGTTTTTGTAACTCCAGTCAATCCAACGCAGGCGTCTGAACCAAAACAAGGAGCGCGAGATCCCCTCATGACGGCGAATAAACTGGGTGACAACACTAATCTGAGGACCTAGGCAAAAAGGAATCATTTCTGAAGTCATGACCTAAGACGAGTTTGCTGCTGACATGCGGTACATGTGCGCTCACCCTCCTTGGAAAACATTCAGATGCTACAGGGACCCACAGCACACTTGTGATCATTTTAAACCACAGCCTCTCTCCGATTTCTCAAAGCTCTCCTTACTACACGTGAAAAACTGACGCAAATCCACACTGACTCACAGCCCAAGTGGATTGTGGTGGACTTCATCCTGAGACGAGCTCCTCATTCTCACTTTGCGCGCAGGACTGGAGGTGGACAGCTGAGACGGATAGCCATTAACACCTATTTTCATGCATCTTGAACGCTTCTCCAGTGATCATTTGTGATTGTTCTTCTTGAATAACATAGCTGACCAGGAGGTTCTTTAAAGTTATCAGTGAGGTTCATGTACAAATGTCTACCTCACGCTTAAAGCTCCTCTGTGTCCCACTGCAGCCCTGATCACATttcaaaatgacctccagcataGACCGgGATGACAGCAGTATCTTTGATGGACTGATGGAAGAAGATGAGAAGGACAAAGCAAAACGAGTTTCCAGGAACAAGTCGGAAAAGAAGAGGCGAGACCAGTTCAATGTGCTCATCAAGGAGCTGGGCACCATGCTGCCTGGCAACACCCGCAAGATGGACAAATCCACCATTCTGCAGAAAAGCATTGACTTCCTGCGCAAGCACAAAGAAATTGCAGCACAGTCGGAGTCCAGTGAGATTCGTCAGGACTGGAAGCCTCCGTTCCTCAGCAACGAGGAGTTTACACAGCTGATGTTAGAGGCCCTAGATGGCTTCTTTCTAGCCATTATGACAGACGGCAACATAATCTACGTGTCTGAAAGTGTCACCTCTTTACTAGAGCATTTACCAtctgaCCTGGTGGACCAGAACCTGTTGAATTTTCTTCCACTGGGAGAGCACTCTGAAGTGTACAAAGCCCTCTCAACACACATACTCGAAGGAGAGAGCCTCACACCAGACCACTTAAAGACAAAAAACCAGTTAGAGTTCTGCTGCCACATGCTCCGGGGCACCATCGACCCCAAAGAGCCTCCCGTCTACGAGTATGTAAAGTTTATCGGAAACTTCAAGTCTCTCAACACTGTGCCTAACTCGACACGGAACGGCTTTGAAGGTGTGATCCAGCGCTCGCTCAGGCCCTCGTTTGAAGACCGCGTGTGTTTCATTGCCACTGTGAGGTTAGCCAAGCCTCAGTTTATCAAGGAGATGTGCACTGTGGAGGAACCCAATGAGGAGTTCACTTCCAGACACAGCTTAGAGTGGAAATTCCTTTTCCTGGAccacagGGCGCCCCCTATCATAGGTTACCTGCCTTTCGAAGTTTTGGGCACATCGGGGTATGATTACTATCACGTAGATGACTTGGAGACCCTTGCCAAGTGCCATGAACACCtGATGCAGTATGGGAAAGGGAAGTCGTGCTATTATCGGTTCTTGACCAAAGGCCAGCAGTGGATTTGGCTGCAGACTCACTACTACATCACCTACCACCAGTGGAACTCGCGGCCTGAGTTCAttgtctgcacacacactgttgtcAGCTATGCTGAGGTTAGGGCTGAGCAGCGCAGAGAGCTGGGCATCGAGGAGTCACCTCCTGAGATCTCTGCAGACAAGTCTCAAGACTCGGGCTCTGAGTCTCAGTTGAACACCTCCAGCCTGAAGGAGGCACTGGAGCGCTTTGATCAGAGTCGCACGCCCTCAGCCTCCTCCCGGAGCTCACGGAAGTCCTCCTCACACACCGCCGTTTCCGACCCCACCTccACCCAGACAAAGCTACAGACAGAGCACAGTACGCCGCCCCGCCAATCTGTCTCTACTATTGAAAAGACTTCTCAGCGCCGATCATCCATCAGcagccagTCGATGAGCTCTCAGAATACGAGCCAGACGATGGCAGCTTGTCTGGTGTCTCAGCCTCAGCAGCCACAGCAGCTGCAGCCTACtgtgcagccAGTGCTACAGTTCTCCACACAGCTGGATGCCATGCAGCACCTGAAGGAACAGCTGGAGCAGCGCACGCGTATGATCGAGGCTAACATCCAGAGGCAGCAAGAGGAGCTGCGTCAGATTCAGGAGGAGCTGCAAAGGGTGCAGGGCCAGGGCTTACAGatgttccTGCAGCAAGGTGGCGGTAGTCTGAACCTTGGCTCGGTGCAGTTAGCGCAGGGTTCCTCGGTGCAGCCAGGCACGGCTCTGACCATGCAGGGGCTGGTGGTGCCTGCAGGAATCTTACAAGGCAACCTGGCATCAACACATACGGGCACACAGCACTCTGTCACTCAGCAGACCCAGCCAGCTCAGCCTCAGCAGCAGAGCATTCTCCGAGAGCAgagtggcacacacacacagTCCCAGAGATCGTCGCACACACTGCAGTCTCCTCAGGGAGCCCTGCCTGCGTCTCTCTACAACACCATGATGATTTCACAGCCTGGTCAGGCCAACGTGGTGCAGATCTCCACCAGTTTAACCCAGAGCAGTCCGAGTGGAACCGCAGTCGCCACCTTCTCTCAGGACCGCCAGATACGATTCCCAGCAGCCCCTCAGCTCCTTACTAAGTTAGTGACGGGGCCTATGGCATGTGGCGCCGTCATGGTGCCCACCACCATGTTCATGGGTCAGGTGGTGACACCGTTTGCCCCTCAGCAGAGTCAAAATCAGACCATCAGCATTGGACAGCAAGCACCCACACCCTCGCAGGAGCAGCAGGGCCAGACGCAGGCCGGCACACAACCACAGAGCCAAAACCAGACTCCACTTAGCCAGACTCAGTTCCTCCAGGCACCTCGTCTTCTTCATGGGAATCAGTCAGCGCAGCTGATCCTCCAGGCAGCGTTTCCTCTCCAGCAGCAGAACGCCTTCGCCGCAACcacacaacagcagcagcaggtgcagcagcagcagctccaaCAGCAACATCAGCACCAACAGCAGCTtcagcatcagcagcagcagcagcagctggctTCTCATAGGCCAGACAGCATGTTGGACCGCTCCAATGCCCCGCCTCAGTAACCCGGCACCAGCCAATTGCGTGGCGAGGACCGAATCTGACCTCTGTTGTGCAGGGCGACGAAGGACGAGTATTTGCAGTATTCAAACTGTACCTGTTATTTGGCGCAAAGCAAAAGGTGCTGTTGTGTCTCTGCGCCCTACATGTCATCCCTCACCAAGTTCTGGATGCTTGCACTGAATTCTGGGAAGCATAGCCCACACTGGCTGAGTGGTTAGTAAGCTAGCAAGGGAGCccttggtttattttttaccaACCGAATCAAGATAAGAGGCAAGGCAAGTTGTGAGGTGGGCCGTctttcattcacacattcacatattaaTTTATGTAGAACGCTCCAGTTTGTGGACTGGAGGTGATTCAAGACTTCAGAGAAGTCCTGTAGGACAAATGGCACCACATCCATTTGTTCTTCTCCATTCATATCCTCCCTTCCCTGCTCTCTTCTTTTCATCTTTGTGTtttccatgtaaaaaaaaaaaaaaaaa
>XM_034313931.1
atgttagAGTATGTGTCCTTTAAAATGAAACAGGAGACTGACTGCGCCgctaaagttgttttttttcccgtattgtttaaataaaagctaGTTTGTCGTTTGACACGACGTTAAAATATCCTCCTCGCGCTACAatgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgccagaTTGTGTAGGCTGCTTCTGCTGCTGCCGCTTAGTGTgcagtgcgcatgcgcgtgGGAAGCCCAGGGTAGGCCCTGCTGTTTTTGTAACTCCAGTCAATCCAACGCAGGCGTCTGAACCAAAACAAGGAGCGCGAGATCCCCTCATGACGGCGAATAAACTGGGTGACAACACTAATCTGAGGACCTAGGCAAAAAGGAATCATTTCTGAAGTCATGACCTAAGACGAGTTTGCTGCTGACATGCGGTACATGTGCGCTCACCCTCCTTGGAAAACATTCAGATGCTACAGGGACCCACAGCACACTTGTGATCATTTTAAACCACAGCCTCTCTCCGATTTCTCAAAGCTCTCCTTACTACACGTGAAAAACTGACGCAAATCCACACTGACTCACAGCCCAAGTGGATTGTGGTGGACTTCATCCTGAGACGAGCTCCTCATTCTCACTTTGCGCGCAGGACTGGAGGTTCATGTACAAATGTCTACCTCACGCTTAAAGCTCCTCTGTGTCCCACTGCAGCCCTGATCACATttcaaaatgacctccagcataGACCGgGATGACAGCAGTATCTTTGATGGACTGATGGAAGAAGATGAGAAGGACAAAGCAAAACGAGTTTCCAGGAACAAGTCGGAAAAGAAGAGGCGAGACCAGTTCAATGTGCTCATCAAGGAGCTGGGCACCATGCTGCCTGGCAACACCCGCAAGATGGACAAATCCACCATTCTGCAGAAAAGCATTGACTTCCTGCGCAAGCACAAAGAAATTGCAGCACAGTCGGAGTCCAGTGAGATTCGTCAGGACTGGAAGCCTCCGTTCCTCAGCAACGAGGAGTTTACACAGCTGATGTTAGAGGCCCTAGATGGCTTCTTTCTAGCCATTATGACAGACGGCAACATAATCTACGTGTCTGAAAGTGTCACCTCTTTACTAGAGCATTTACCAtctgaCCTGGTGGACCAGAACCTGTTGAATTTTCTTCCACTGGGAGAGCACTCTGAAGTGTACAAAGCCCTCTCAACACACATACTCGAAGGAGAGAGCCTCACACCAGACCACTTAAAGACAAAAAACCAGTTAGAGTTCTGCTGCCACATGCTCCGGGGCACCATCGACCCCAAAGAGCCTCCCGTCTACGAGTATGTAAAGTTTATCGGAAACTTCAAGTCTCTCAACACTGTGCCTAACTCGACACGGAACGGCTTTGAAGGTGTGATCCAGCGCTCGCTCAGGCCCTCGTTTGAAGACCGCGTGTGTTTCATTGCCACTGTGAGGTTAGCCAAGCCTCAGTTTATCAAGGAGATGTGCACTGTGGAGGAACCCAATGAGGAGTTCACTTCCAGACACAGCTTAGAGTGGAAATTCCTTTTCCTGGAccacagGGCGCCCCCTATCATAGGTTACCTGCCTTTCGAAGTTTTGGGCACATCGGGGTATGATTACTATCACGTAGATGACTTGGAGACCCTTGCCAAGTGCCATGAACACCtGATGCAGTATGGGAAAGGGAAGTCGTGCTATTATCGGTTCTTGACCAAAGGCCAGCAGTGGATTTGGCTGCAGACTCACTACTACATCACCTACCACCAGTGGAACTCGCGGCCTGAGTTCAttgtctgcacacacactgttgtcAGCTATGCTGAGGTTAGGGCTGAGCAGCGCAGAGAGCTGGGCATCGAGGAGTCACCTCCTGAGATCTCTGCAGACAAGTCTCAAGACTCGGGCTCTGAGTCTCAGTTGAACACCTCCAGCCTGAAGGAGGCACTGGAGCGCTTTGATCAGAGTCGCACGCCCTCAGCCTCCTCCCGGAGCTCACGGAAGTCCTCCTCACACACCGCCGTTTCCGACCCCACCTccACCCAGACAAAGCTACAGACAGAGCACAGTACGCCGCCCCGCCAATCTGTCTCTACTATTGAAAAGACTTCTCAGCGCCGATCATCCATCAGcagccagTCGATGAGCTCTCAGAATACGAGCCAGACGATGGCAGCTTGTCTGGTGTCTCAGCCTCAGCAGCCACAGCAGCTGCAGCCTACtgtgcagccAGTGCTACAGTTCTCCACACAGCTGGATGCCATGCAGCACCTGAAGGAACAGCTGGAGCAGCGCACGCGTATGATCGAGGCTAACATCCAGAGGCAGCAAGAGGAGCTGCGTCAGATTCAGGAGGAGCTGCAAAGGGTGCAGGGCCAGGGCTTACAGatgttccTGCAGCAAGGTGGCGGTAGTCTGAACCTTGGCTCGGTGCAGTTAGCGCAGGGTTCCTCGGTGCAGCCAGGCACGGCTCTGACCATGCAGGGGCTGGTGGTGCCTGCAGGAATCTTACAAGGCAACCTGGCATCAACACATACGGGCACACAGCACTCTGTCACTCAGCAGACCCAGCCAGCTCAGCCTCAGCAGCAGAGCATTCTCCGAGAGCAgagtggcacacacacacagTCCCAGAGATCGTCGCACACACTGCAGTCTCCTCAGGGAGCCCTGCCTGCGTCTCTCTACAACACCATGATGATTTCACAGCCTGGTCAGGCCAACGTGGTGCAGATCTCCACCAGTTTAACCCAGAGCAGTCCGAGTGGAACCGCAGTCGCCACCTTCTCTCAGGACCGCCAGATACGATTCCCAGCAGCCCCTCAGCTCCTTACTAAGTTAGTGACGGGGCCTATGGCATGTGGCGCCGTCATGGTGCCCACCACCATGTTCATGGGTCAGGTGGTGACACCGTTTGCCCCTCAGCAGAGTCAAAATCAGACCATCAGCATTGGACAGCAAGCACCCACACCCTCGCAGGAGCAGCAGGGCCAGACGCAGGCCGGCACACAACCACAGAGCCAAAACCAGACTCCACTTAGCCAGACTCAGTTCCTCCAGGCACCTCGTCTTCTTCATGGGAATCAGTCAGCGCAGCTGATCCTCCAGGCAGCGTTTCCTCTCCAGCAGCAGAACGCCTTCGCCGCAACcacacaacagcagcagcaggtgcagcagcagcagctccaaCAGCAACATCAGCACCAACAGCAGCTtcagcatcagcagcagcagcagcagctggctTCTCATAGGCCAGACAGCATGTTGGACCGCTCCAATGCCCCGCCTCAGTAACCCGGCACCAGCCAATTGCGTGGCGAGGACCGAATCTGACCTCTGTTGTGCAGGGCGACGAAGGACGAGTATTTGCAGTATTCAAACTGTACCTGTTATTTGGCGCAAAGCAAAAGGTGCTGTTGTGTCTCTGCGCCCTACATGTCATCCCTCACCAAGTTCTGGATGCTTGCACTGAATTCTGGGAAGCATAGCCCACACTGGCTGAGTGGTTAGTAAGCTAGCAAGGGAGCccttggtttattttttaccaACCGAATCAAGATAAGAGGCAAGGCAAGTTGTGAGGTGGGCCGTctttcattcacacattcacatattaaTTTATGTAGAACGCTCCAGTTTGTGGACTGGAGGTGATTCAAGACTTCAGAGAAGTCCTGTAGGACAAATGGCACCACATCCATTTGTTCTTCTCCATTCATATCCTCCCTTCCCTGCTCTCTTCTTTTCATCTTTGTGTtttccatgtaaaaaaaaaaaaaaaaa
>XM_034313932.1
atgttagAGTATGTGTCCTTTAAAATGAAACAGGAGACTGACTGCGCCgctaaagttgttttttttcccgtattgtttaaataaaagctaGTTTGTCGTTTGACACGACGTTAAAATATCCTCCTCGCGCTACAatgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgccagaTTGTGTAGGCTGCTTCTGCTGCTGCCGCTTAGTGTgcagtgcgcatgcgcgtgGGAAGCCCAGGGTAGGCCCTGCTGTTTTTGTAACTCCAGTCAATCCAACGCAGGCGTCTGAACCAAAACAAGGAGCGCGAGATCCCCTCATGACGGCGAATAAACTGGGTGACAACACTAATCTGAGGACCTAGGCAAAAAGGAATCATTTCTGAAGTCATGACCTAAGACGAGTTTGCTGCTGACATGCGGTACATGTGCGCTCACCCTCCTTGGAAAACATTCAGATGCTACAGGGACCCACAGCACACTTGTGATCATTTTAAACCACAGCCTCTCTCCGATTTCTCAAAGCTCTCCTTACTACACGTGAAAAACTGACGCAAATCCACACTGACTCACAGCCCAAGTGGATTGTGGTGGACTTCATCCTGAGACGAGCTCCTCATTCTCACTTTGCGCGCAGGACTGGAGGTTGGTTTGGCTTCAAAATGAAACCGAGGCCACGTTCAGACCTGGTATCAACACCTGTCTCAGGTGATCTGGCGATCTGATTACAGGTGGACAGCTGAGACGGATAGCCATTAACACCTATTTTCATGCATCTTGAACGCTTCTCCAGTGATCATTTGTGATTGTTCTTCTTGAATAACATAGCTGACCAGGAGGTTCTTTAAAGTTATCAGTGAGgGATGACAGCAGTATCTTTGATGGACTGATGGAAGAAGATGAGAAGGACAAAGCAAAACGAGTTTCCAGGAACAAGTCGGAAAAGAAGAGGCGAGACCAGTTCAATGTGCTCATCAAGGAGCTGGGCACCATGCTGCCTGGCAACACCCGCAAGATGGACAAATCCACCATTCTGCAGAAAAGCATTGACTTCCTGCGCAAGCACAAAGAAATTGCAGCACAGTCGGAGTCCAGTGAGATTCGTCAGGACTGGAAGCCTCCGTTCCTCAGCAACGAGGAGTTTACACAGCTGATGTTAGAGGCCCTAGATGGCTTCTTTCTAGCCATTATGACAGACGGCAACATAATCTACGTGTCTGAAAGTGTCACCTCTTTACTAGAGCATTTACCAtctgaCCTGGTGGACCAGAACCTGTTGAATTTTCTTCCACTGGGAGAGCACTCTGAAGTGTACAAAGCCCTCTCAACACACATACTCGAAGGAGAGAGCCTCACACCAGACCACTTAAAGACAAAAAACCAGTTAGAGTTCTGCTGCCACATGCTCCGGGGCACCATCGACCCCAAAGAGCCTCCCGTCTACGAGTATGTAAAGTTTATCGGAAACTTCAAGTCTCTCAACACTGTGCCTAACTCGACACGGAACGGCTTTGAAGGTGTGATCCAGCGCTCGCTCAGGCCCTCGTTTGAAGACCGCGTGTGTTTCATTGCCACTGTGAGGTTAGCCAAGCCTCAGTTTATCAAGGAGATGTGCACTGTGGAGGAACCCAATGAGGAGTTCACTTCCAGACACAGCTTAGAGTGGAAATTCCTTTTCCTGGAccacagGGCGCCCCCTATCATAGGTTACCTGCCTTTCGAAGTTTTGGGCACATCGGGGTATGATTACTATCACGTAGATGACTTGGAGACCCTTGCCAAGTGCCATGAACACCtGATGCAGTATGGGAAAGGGAAGTCGTGCTATTATCGGTTCTTGACCAAAGGCCAGCAGTGGATTTGGCTGCAGACTCACTACTACATCACCTACCACCAGTGGAACTCGCGGCCTGAGTTCAttgtctgcacacacactgttgtcAGCTATGCTGAGGTTAGGGCTGAGCAGCGCAGAGAGCTGGGCATCGAGGAGTCACCTCCTGAGATCTCTGCAGACAAGTCTCAAGACTCGGGCTCTGAGTCTCAGTTGAACACCTCCAGCCTGAAGGAGGCACTGGAGCGCTTTGATCAGAGTCGCACGCCCTCAGCCTCCTCCCGGAGCTCACGGAAGTCCTCCTCACACACCGCCGTTTCCGACCCCACCTccACCCAGACAAAGCTACAGACAGAGCACAGTACGCCGCCCCGCCAATCTGTCTCTACTATTGAAAAGACTTCTCAGCGCCGATCATCCATCAGcagccagTCGATGAGCTCTCAGAATACGAGCCAGACGATGGCAGCTTGTCTGGTGTCTCAGCCTCAGCAGCCACAGCAGCTGCAGCCTACtgtgcagccAGTGCTACAGTTCTCCACACAGCTGGATGCCATGCAGCACCTGAAGGAACAGCTGGAGCAGCGCACGCGTATGATCGAGGCTAACATCCAGAGGCAGCAAGAGGAGCTGCGTCAGATTCAGGAGGAGCTGCAAAGGGTGCAGGGCCAGGGCTTACAGatgttccTGCAGCAAGGTGGCGGTAGTCTGAACCTTGGCTCGGTGCAGTTAGCGCAGGGTTCCTCGGTGCAGCCAGGCACGGCTCTGACCATGCAGGGGCTGGTGGTGCCTGCAGGAATCTTACAAGGCAACCTGGCATCAACACATACGGGCACACAGCACTCTGTCACTCAGCAGACCCAGCCAGCTCAGCCTCAGCAGCAGAGCATTCTCCGAGAGCAgagtggcacacacacacagTCCCAGAGATCGTCGCACACACTGCAGTCTCCTCAGGGAGCCCTGCCTGCGTCTCTCTACAACACCATGATGATTTCACAGCCTGGTCAGGCCAACGTGGTGCAGATCTCCACCAGTTTAACCCAGAGCAGTCCGAGTGGAACCGCAGTCGCCACCTTCTCTCAGGACCGCCAGATACGATTCCCAGCAGCCCCTCAGCTCCTTACTAAGTTAGTGACGGGGCCTATGGCATGTGGCGCCGTCATGGTGCCCACCACCATGTTCATGGGTCAGGTGGTGACACCGTTTGCCCCTCAGCAGAGTCAAAATCAGACCATCAGCATTGGACAGCAAGCACCCACACCCTCGCAGGAGCAGCAGGGCCAGACGCAGGCCGGCACACAACCACAGAGCCAAAACCAGACTCCACTTAGCCAGACTCAGTTCCTCCAGGCACCTCGTCTTCTTCATGGGAATCAGTCAGCGCAGCTGATCCTCCAGGCAGCGTTTCCTCTCCAGCAGCAGAACGCCTTCGCCGCAACcacacaacagcagcagcaggtgcagcagcagcagctccaaCAGCAACATCAGCACCAACAGCAGCTtcagcatcagcagcagcagcagcagctggctTCTCATAGGCCAGACAGCATGTTGGACCGCTCCAATGCCCCGCCTCAGTAACCCGGCACCAGCCAATTGCGTGGCGAGGACCGAATCTGACCTCTGTTGTGCAGGGCGACGAAGGACGAGTATTTGCAGTATTCAAACTGTACCTGTTATTTGGCGCAAAGCAAAAGGTGCTGTTGTGTCTCTGCGCCCTACATGTCATCCCTCACCAAGTTCTGGATGCTTGCACTGAATTCTGGGAAGCATAGCCCACACTGGCTGAGTGGTTAGTAAGCTAGCAAGGGAGCccttggtttattttttaccaACCGAATCAAGATAAGAGGCAAGGCAAGTTGTGAGGTGGGCCGTctttcattcacacattcacatattaaTTTATGTAGAACGCTCCAGTTTGTGGACTGGAGGTGATTCAAGACTTCAGAGAAGTCCTGTAGGACAAATGGCACCACATCCATTTGTTCTTCTCCATTCATATCCTCCCTTCCCTGCTCTCTTCTTTTCATCTTTGTGTtttccatgtaaaaaaaaaaaaaaaaa

Function

symbol description
clock Enables E-box binding activity and histone acetyltransferase activity. Involved in several processes, including DNA damage checkpoint signaling; cellular response to ionizing radiation; and regulation of gene expression. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Located in chromosome; cytosol; and nucleoplasm. Part of transcription regulator complex. Implicated in Alzheimer's disease.

NR:

description
circadian locomoter output cycles protein kaput

GO:

id name namespace
GO:0009266 response to temperature stimulus biological_process
GO:0032922 circadian regulation of gene expression biological_process
GO:0009648 photoperiodism biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003677 DNA binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K02223 CLOCK, KAT13D; circadian locomoter output cycles kaput protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU343070 False 897 lncRNA 0.43 3 4248599 4279496
XM_034313929.1 True 4017 mRNA 0.52 23 4248330 4309929
XM_034313930.1 False 3931 mRNA 0.52 24 4248330 4309929
XM_034313931.1 False 3801 mRNA 0.52 23 4248330 4309929
XM_034313932.1 False 3925 mRNA 0.52 22 4248330 4309929

Neighbor

gene id symbol gene type direction distance location
nmu NA coding upstream 9409 4235827 ~ 4238921 (+)
cep135 cep135 coding upstream 51890 4176531 ~ 4196440 (+)
aasdh aasdh coding upstream 110769 4124058 ~ 4137561 (+)
ppat ppat,LOC107683925,LOC107721366,LOC107737308,LOC107556156 coding upstream 132875 4101669 ~ 4115455 (+)
hook1 hook1 coding upstream 203057 4024682 ~ 4045273 (+)
trnad-guc_16 NA coding downstream 17542 4327471 ~ 4327542 (+)
trnad-guc_18 NA coding downstream 23629 4333558 ~ 4333629 (+)
trnad-guc_19 NA coding downstream 27974 4337903 ~ 4337974 (+)
trnad-guc_22 NA coding downstream 39879 4349808 ~ 4349879 (+)
LOC113545323 LOC108258072,LOC107721804,LOC107581484,LOC107597850,LOC108414547,LOC107712838,LOC107658162 coding downstream 56836 4366765 ~ 4396120 (+)
LOC117599777 NA non-coding upstream 4379 4239026 ~ 4243951 (+)
G289530 LOC108257764 non-coding upstream 174364 4061818 ~ 4073966 (+)
G289532 NA non-coding upstream 181905 4060744 ~ 4066425 (+)
G289533 NA non-coding upstream 192345 4047209 ~ 4055985 (+)
G289515 NA non-coding upstream 274315 3942274 ~ 3974015 (+)
G289619 NA non-coding downstream 9532 4319461 ~ 4330272 (+)
G289521 NA non-coding downstream 35650 4345579 ~ 4363088 (+)
LOC117599675 LOC107732010 non-coding downstream 40819 4350748 ~ 4352801 (+)
G289831 NA non-coding downstream 123306 4433235 ~ 4434790 (+)
G289866 angptl1,angptl1a non-coding downstream 219999 4529928 ~ 4539840 (+)
G289531 NA other upstream 177963 4054457 ~ 4070367 (+)
trnad-guc_14 NA other upstream 260207 3988052 ~ 3988123 (+)
ipo13 ipo13,LOC107697216,LOC107745904,LOC107593276,LOC107691006,LOC106613950 other upstream 265636 3943494 ~ 3982694 (+)
cnstb LOC108257742 other upstream 1752278 2485036 ~ 2496052 (+)
LOC113546780 NA other upstream 2106149 2133158 ~ 2142181 (+)
trnad-guc_17 NA other downstream 18903 4328832 ~ 4338299 (+)
LOC113545190 NA other downstream 291126 4601055 ~ 4609601 (+)
dnm3a dnm3,dnm3a other downstream 632022 4941951 ~ 4979400 (+)
usp24 usp24 other downstream 1425544 5735473 ~ 5801693 (+)
b4galt6 b4galt6,LOC107712262,LOC107687169,LOC107712895 other downstream 1825991 6135920 ~ 6160040 (+)

Expression


Co-expression Network