nudt14 (nudt14,LOC107718404,LOC107683965)


Basic Information

Item Value
gene id nudt14
gene name nudt14,LOC107718404,LOC107683965
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 8043386 ~ 8074444 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU345691
GCTACATTTAGCCAGAGTAGGGCTGCGGTTGAGTTGTGTGTTTTGAGGAACACCggtgaggaagtgtgtgtgtgtgtatatatctaggctatatgtgtgtgtgtgtatgtgtgcgtgaaCCATGGAGCAGATTAATAATATTCAGGTGGTTCCGTGCACCAGCTCGAATTATCTGAAAGCGTTCACGGTGCATTATAGCCAGAATGGAACAAAGAAGTCGTGGGATTTTATGCAAACTCATGACAGGTCAGGAGTAGGAGTTACAGGAGCCAAGCAGACCATGTTCTATGCAGAGGTGTCAGACGAGAACCGCGTTGGTGAGGGTGGTGGACAACCTCAAGAAGGCGAGCTGATCGAAGTGGTCAAAGTGCCCTTGCACGAGGCCATGACTTTCGCCTATGACGAGAGCATCCCCAAAACCATGGGTGTCATTTTCAGCTTCATGTGGTTTCATAGCAACATGGCACCTAAGTATAAAATCTCCACTAATGTGTAATGGATGACAGCTACTTTTTCTTCCAACCTTGAAGCACCCTGTATGTAACTTTCTATTACTTTGTGTTCCTATTGAATTGAATACTGTGTTCTTATTTGCTTTCCTCTTTTCTTACTCTAATTATTGTCTATTTCAGACTTTTCCTCAAACAAATGTTAGCCATAATTCCTCCTTTTTTGTAGTAGATGAGTCCCAGAATAATAGTAATTGTGAGTTTGTTTCATGAAATGGTATACTTTGCTTTTAATGagtcagttattattattattttttaaatctgattgctCTTTAGAAATCTTATCATGGCTGGTAATACTATACATGTTAGAAGAGGAAGTTGTTCATATCATCTAAGGAGGTTTGGGGAAGTTTGATGAGCAAATCCAGATTTGCAGTTTTGTCAGAAAAGACAGGTATTTGTTACATGATTAATGTGCTACATAGCATAGCTAATGGGCAGTTTCCAACCTTGTATCTTAATTGTGCAAAGAATAGCCAAGCATTTGCAGACATCTCAGGTCTAACACAAACTACAAAGCATTCAGGGTTAGAGGCAAAGCTCTTTCATCGATACTTAACATCAAGCCCGCAAGTCCTCATTTAAAATCGAAAAAGAAATAGGGTTTCTTCATTTGGGGTCTGCTGCTGTTAATACATGCACAAAAACAGTGTACATGATTCAAACAATCCcatgtttatcattttttcACTGATTTTGACATGCCATGAAGGCTTACTGCTAGTCCTGAATAGCTTTTTAGAAACCATTTGGTTTCAACAATCACTAATGGAGGTCCGTtataattgtaataaaacaaattttatagTAGAGCAAGTAATTTGGAGTGATTATCACTTGCACAGAGATTtcatctctgtgttttttttctagaattAGAAAGCTACTCTGGTATAattcttatatatttaatatctaataCTAGAGTAATCATGGTTTATAATGAGCACAGTATACAATTTACAATGACATCATAAATGTCTCTTCAATCATGGCAACTATCATTGTGTCTGTCTTGACCAATTAATACTTGAAGACCATACATAgggtttatttttcacatgctgTATCTGAGGTTTCTCTTTCCATCTGACCTTGTTaggtattttaatgtttatattgcTATTGCCTCACCTGTGATGATGATACTTATTACTACGCTATGCCTGTTTAGTTCATTTTCTGGGACGAAAAAAGGTCATAAGCCATTTGACACTGCAATCATCTATTTGACTGTTTTCAGCTATTTTAGATTttcaaatagaaaaaataactgTTAAAATGACTACTTCAACTACTGGATGGGTGTGAATTATTTTCATTGTATCTAAACAatcagtgttttgttgtttatgtGGCAACAAATACAAGTAAGCCATTTGAACATGTGAAGTATGAATCTAATTAAGAAGTACATTCCTTTATTTAAAGATATGCTATGTAAGATTTTGTTAAGGTTCTTTGTTAAGGTTTTTGtatatttcaaaaatacatttttatcagtAAATTTGCTTATTGATGGAATTTGTCTttgcaataaaaacaacataaatgtacaaaataaaaacatataattagaTAATGTAAGAATGCATAGTATACCTTTAATGAAGCTTCTGAATGGTACTATTTATGACTATTAACATTCATTGTTTTAGCATTATTACCTAAATATTATATGCTAAAGAAACACTGAATGCATGTTGACGAAAAGCTCAAGTTGTGTTCTAGAAAGCATAGTGATGTCTTCGTAAGCCTCTGCCCCTATCCTGTTTTTATGTGATTGTTGATTGTTTCCTACATGCTTTTACTTGAGAATAAAAATCAAATGCTACTGATACTGTACAGTAGTGGTTCTTTCTActtgattttaatgttaatgatataGAGAAAAGGtgtttacataaaaattgtatttgatTCTTTGtgtattggattttttttttccattaaatgtGTTCTATGCATTTGAATTATATATTGAATTGTGATGTCTTGCATGTGCTCCATGTGTATTTTAATCTGGATTGAGTGTACATAAATAAAGCTGAAT
>XM_026944614.2
AGGCTTCCGTAGAGCTACATTTAGCCAGAGTAGGGCTGCGGTTGAGTTGTGTGTTTTGAGGAACACCggtgaggaagtgtgtgtgtgtgtatatatctaggctatatgtgtgtgtgtgtatgtgtgcgtgaaCCATGGAGCAGATTAATAATATTCAGGTGGTTCCGTGCACCAGCTCGAATTATCTGAAAGCGTTCACGGTGCATTATAGCCAGAATGGAACAAAGAAGTCGTGGGATTTTATGCAAACTCATGACAGTGTCTCTGTGCTGATCTTCAATACCACCTCTCattgcttcatcctggtcaagCAGTTCCGCCCAgCTGTGTACATGTGTGAGTGGGAGAGAATGAAACCTGCACACGCTGACCCAGAAGGAGAGCAGGGAGATGAGGGCTGTGCCACAGCTGGCccagaggaggagcaggagggaAGCGAGGAGGCCAGCCGCCCTCACCAGCCCCCCGCTTCAGCAGGGGTGACGTATGAGCTGTGTGCTGGCATCGTAGACAAGCCGCATCTCTCCCTGGAGGAGATCGCCTGCCAGGAAGTGCTGGAGGAGTGTGGTTATGAAATTCCTGTCTCCAAGCTAAGGAGGATCACATCATATAGGTCAGGAGTAGGAGTTACAGGAGCCAAGCAGACCATGTTCTATGCAGAGGTGTCAGACGAGAACCGCGTTGGTGAGGGTGGTGGACAACCTCAAGAAGGCGAGCTGATCGAAGTGGTCAAAGTGCCCTTGCACGAGGCCATGACTTTCGCCTATGACGAGAGCATCCCCAAAACCATGGGTGTCATTTTCAGCTTCATGTGGTTTCATAGCAACATGGCACCTAAGTATAAAATCTCCACTAATGTGTAATGGATGACAGCTACTTTTTCTTCCAACCTTGAAGCACCCTGTATGTAACTTTCTATTACTTTGTGTTCCTATTGAATTGAATACTGTGTTCTTATTTGCTTTCCTCTTTTCTTACTCTAATTATTGTCTATTTCAGACTTTTCCTCAAACAAATGTTAGCCATAATTCCTCCTTTTTTGTAGTAGATGAGTCCCAGAATAATAGTAATTGTGAGTTTGTTTCATGAAATGGTATACTTTGCTTTTAATGagtcagttattattattattttttaaatctgattgctCTTTAGAAATCTTATCATGGCTGGTAATACTATACATGTTAGAAGAGGAAGTTGTTCATATCATCTAAGGAGGTTTGGGGAAGTTTGATGAGCAAATCCAGATTTGCAGTTTTGTCAGAAAAGACAGGTATTTGTTACATGATTAATGTGCTACATAGCATAGCTAATGGGCAGTTTCCAACCTTGTATCTTAATTGTGCAAAGAATAGCCAAGCATTTGCAGACATCTCAGGTCTAACACAAACTACAAAGCATTCAGGGTTAGAGGCAAAGCTCTTTCATCGATACTTAACATCAAGCCCGCAAGTCCTCATTTAAAATCGAAAAAGAAATAGGGTTTCTTCATTTGGGGTCTGCTGCTGTTAATACATGCACAAAAACAGTGTACATGATTCAAACAATCCcatgtttatcattttttcACTGATTTTGACATGCCATGAAGGCTTACTGCTAGTCCTGAATAGCTTTTTAGAAACCATTTGGTTTCAACAATCACTAATGGAGGTCCGTtataattgtaataaaacaaattttatagTAGAGCAAGTAATTTGGAGTGATTATCACTTGCACAGAGATTtcatctctgtgttttttttctagaattAGAAAGCTACTCTGGTATAattcttatatatttaatatctaataCTAGAGTAATCATGGTTTATAATGAGCACAGTATACAATTTACAATGACATCATAAATGTCTCTTCAATCATGGCAACTATCATTGTGTCTGTCTTGACCAATTAATACTTGAAGACCATACATAgggtttatttttcacatgctgTATCTGAGGTTTCTCTTTCCATCTGACCTTGTTaggtattttaatgtttatattgcTATTGCCTCACCTGTGATGATGATACTTATTACTACGCTATGCCTGTTTAGTTCATTTTCTGGGACGAAAAAAGGTCATAAGCCATTTGACACTGCAATCATCTATTTGACTGTTTTCAGCTATTTTAGATTttcaaatagaaaaaataactgTTAAAATGACTACTTCAACTACTGGATGGGTGTGAATTATTTTCATTGTATCTAAACAatcagtgttttgttgtttatgtGGCAACAAATACAAGTAAGCCATTTGAACATGTGAAGTATGAATCTAATTAAGAAGTACATTCCTTTATTTAAAGATATGCTATGTAAGATTTTGTTAAGGTTCTTTGTTAAGGTTTTTGtatatttcaaaaatacatttttatcagtAAATTTGCTTATTGATGGAATTTGTCTttgcaataaaaacaacataaatgtacaaaataaaaacatataattagaTAATGTAAGAATGCATAGTATACCTTTAATGAAGCTTCTGAATGGTACTATTTATGACTATTAACATTCATTGTTTTAGCATTATTACCTAAATATTATATGCTAAAGAAACACTGAATGCATGTTGACGAAAAGCTCAAGTTGTGTTCTAGAAAGCATAGTGATGTCTTCGTAAGCCTCTGCCCCTATCCTGTTTTTATGTGATTGTTGATTGTTTCCTACATGCTTTTACTTGAGAATAAAAATCAAATGCTACTGATACTGTACAGTAGTGGTTCTTTCTActtgattttaatgttaatgatataGAGAAAAGGtgtttacataaaaattgtatttgatTCTTTGtgtattggattttttttttccattaaatgtGTTCTATGCATTTGAATTATATATTGAATTGTGATGTCTTGCATGTGCTCCATGTGTATTTTAATCTGGATTGAGTGTACATAAATAAAGCTGAATAAGTCTA

Function

symbol description
nudt14 Predicted to enable UDP-sugar diphosphatase activity. Predicted to be involved in nucleoside phosphate metabolic process and ribose phosphate metabolic process. Orthologous to human NUDT14 (nudix hydrolase 14).

NR:

description
uridine diphosphate glucose pyrophosphatase-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides molecular_function

KEGG:

id description
K08077 NUDT14; UDP-sugar diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
TU345691 False 2568 TUCP 0.34 3 8043399 8074437
XM_026944614.2 True 2942 mRNA 0.37 5 8043386 8074444

Neighbor

gene id symbol gene type direction distance location
brf1b brf1,brf1b,LOC107683968,LOC107718407,LOC107701485 coding upstream 97574 7885793 ~ 7945812 (+)
trnaa-cgc_7 NA coding upstream 154550 7888765 ~ 7888836 (+)
trnaa-ugc_18 NA coding upstream 155306 7888009 ~ 7888080 (+)
trnaa-ugc_17 NA coding upstream 155787 7887528 ~ 7887599 (+)
trnaa-cgc_6 NA coding upstream 158670 7884645 ~ 7884716 (+)
jag2b jag2,jag2b,LOC107718403,LOC107755239 coding downstream 14243 8088687 ~ 8125663 (+)
esr2a LOC108258142,LOC108412120 coding downstream 98718 8173162 ~ 8190581 (+)
LOC113545195 l3hypdh,LOC107684001 coding downstream 222170 8296614 ~ 8305599 (+)
clic5b clic5,LOC108258161,LOC105897798,LOC103355727,LOC108231874,LOC107678823 coding downstream 371872 8446316 ~ 8459728 (+)
LOC113545337 LOC108257647 coding downstream 475498 8549942 ~ 8557745 (+)
LOC117599748 NA non-coding upstream 95355 7945952 ~ 7948031 (+)
G291644 NA non-coding upstream 206306 7833330 ~ 7837080 (+)
G291582 six6b,six6,LOC108257662,LOC107743981,LOC107697293,LOC107589092,LOC103035477 non-coding upstream 375581 7666919 ~ 7667805 (+)
G291581 NA non-coding upstream 377377 7665129 ~ 7666009 (+)
LOC113545343 NA non-coding upstream 428406 7610487 ~ 7614980 (+)
G291769 NA non-coding downstream 51577 8126021 ~ 8127898 (+)
G291907 LOC108412077,LOC108257948,LOC101069770 non-coding downstream 234798 8309242 ~ 8321459 (+)
G291972 NA non-coding downstream 390393 8464837 ~ 8465037 (+)
G291976 runx2b,LOC108258149,LOC107678859,LOC107726745,LOC107603075 non-coding downstream 396503 8470947 ~ 8473728 (+)
G291996 NA non-coding downstream 436125 8510569 ~ 8510776 (+)
atp5mpl NA other upstream 261378 7777597 ~ 7782008 (+)
tdh tdh,LOC107561940,LOC103024478,LOC108435012,LOC107723287 other upstream 1023700 7012742 ~ 7019686 (+)
b4galt6 b4galt6,LOC107712262,LOC107687169,LOC107712895 other upstream 1883346 6135920 ~ 6160040 (+)
usp24 usp24 other upstream 2241693 5735473 ~ 5801693 (+)
dnm3a dnm3,dnm3a other upstream 3063986 4941951 ~ 4979400 (+)
LOC113545369 NA other downstream 414203 8488647 ~ 8534500 (+)
G292216 trmt6 other downstream 919069 8993513 ~ 8996996 (+)
LOC113545247 plcb1,LOC108258091 other downstream 999584 9074028 ~ 9179173 (+)
G293016 ileu other downstream 1829306 9903750 ~ 9950731 (+)
LOC117599798 NA other downstream 2084511 10158955 ~ 10170739 (+)

Expression


Co-expression Network