G292765


Basic Information

Item Value
gene id G292765
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 9554437 ~ 9554807 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU346871
CATGGTCTGTGATGGTGGGCATTGTGGATGTGAAAACAGCTAAAGATCACATAGCACAGCTCTAGGTTTAACAATGAGTTGGTATTATGATCATCCAGAGAATCCATATAGCTCACTCTTTCTTTACTTTTGGGAAAAGTGATGGGCCTCCGTGTCATTCTCATTTAATATGTAGCAGTAATGAATTTCTGTGTAATAAACAGACTGCTTGGACCCTTTTCATAAACATACGTTTAGGTGTTTGATACCATCAACCaacatacactgaaaaaacatactcaaaaaaaaatagaacattAGAACATTTGCAATAGAACATTTTCCATACACCATAGAATGTTAATAATCCAGAAATAAATTCATACTTGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346871 True 371 lncRNA 0.34 1 9554437 9554807

Neighbor

gene id symbol gene type direction distance location
LOC113545265 c25h14orf37,LOC107717645,LOC107659812,LOC107574488,LOC107713862 coding upstream 2496 9542408 ~ 9551941 (+)
entpd5b LOC108257529 coding upstream 49311 9495245 ~ 9505126 (+)
yy1b yy1a,LOC108258103,LOC108411685,LOC107712210,LOC101066055 coding upstream 80273 9463981 ~ 9474164 (+)
evlb evlb,LOC108258102,LOC108411639,LOC103359910 coding upstream 90904 9426445 ~ 9463533 (+)
LOC113545338 LOC108257621 coding upstream 129868 9419110 ~ 9424569 (+)
LOC113545275 LOC108257654 coding downstream 19544 9574351 ~ 9577558 (+)
prpf39 prpf39 coding downstream 64023 9618830 ~ 9626110 (+)
faua fau,LOC108411505,LOC105017549 coding downstream 72771 9627578 ~ 9631109 (+)
ypel5 ypel5,slc30a10,LOC107568027,LOC102210471,LOC102788175,LOC108441457,LOC103458748 coding downstream 112874 9667681 ~ 9672528 (+)
mylk4b mylk4,LOC108257896,LOC101163967,LOC103463388 coding downstream 362558 9917365 ~ 9941395 (+)
G292643 NA non-coding upstream 138861 9414551 ~ 9415576 (+)
G292654 NA non-coding upstream 145723 9408492 ~ 9408714 (+)
G292102 NA non-coding upstream 849193 8705054 ~ 8705244 (+)
G292074 NA non-coding upstream 968535 8584219 ~ 8585902 (+)
G292072 NA non-coding upstream 970960 8582950 ~ 8583477 (+)
G292771 NA non-coding downstream 32893 9587700 ~ 9587903 (+)
G292756 NA non-coding downstream 57181 9611988 ~ 9612612 (+)
G292754 arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149,LOC101063995 non-coding downstream 58618 9613425 ~ 9616591 (+)
G292929 NA non-coding downstream 313342 9868149 ~ 9868609 (+)
G293095 LOC108257535,LOC107682698 non-coding downstream 481644 10036451 ~ 10038355 (+)
LOC113545247 plcb1,LOC108258091 other upstream 375264 9074028 ~ 9179173 (+)
G292216 trmt6 other upstream 557441 8993513 ~ 8996996 (+)
LOC113545369 NA other upstream 1019937 8488647 ~ 8534500 (+)
nudt14 nudt14,LOC107718404,LOC107683965 other upstream 1479993 8043386 ~ 8074444 (+)
atp5mpl NA other upstream 1772429 7777597 ~ 7782008 (+)
G293016 ileu other downstream 348943 9903750 ~ 9950731 (+)
LOC117599798 NA other downstream 604148 10158955 ~ 10170739 (+)
LOC117599733 NA other downstream 1126503 10681310 ~ 10682664 (+)
G293528 NA other downstream 1463599 11018406 ~ 11024973 (+)
pak6b pak6,LOC108257961,LOC108411385 other downstream 2006615 11561422 ~ 11579249 (+)

Expression


Co-expression Network