G293016 (ileu)


Basic Information

Item Value
gene id G293016
gene name ileu
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 9903750 ~ 9950731 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU347160
GTGCATATCATCAATTTTTATTGATAAACACTTTCAAACAAGCATTATTTTTCATGGTATTGTACAACATATCTCTACTGCGGACCTCTGAACCTCCCGAAGAATAGGATGCTTTTCGTGGGGTTGTGTCTGATGAAGAATAGGAAGGGGTGGTCTGCCATGAAGTGCTCCTCTCGTGCCATGCATAATGCAACCATTACAACCGTGGCTGCTGCTGCCTCTGTGCCTTCCTCATTAACCTCCACAAAAGCTTTGTGGGCCACCGATGACACAAAAAGGCCTCCTTCACTGCTCATGCCTGTCAGATCTGCAGCACTGGGCTGGAACAAAGAGCTCATGCCCATCTTATTCAGTATATCCTTCAAAGAGTACTGCTCTTCCAGCTTGAATTTTGGAAGATGGACAACGATATCAGTCCACCTGTCCATCTTCTCTTGATTTGTCCACTCAAGCAGTTTGTCCACCGTTAGGTGTCAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU347160 True 479 TUCP 0.46 2 9903750 9950731

Neighbor

gene id symbol gene type direction distance location
ypel5 ypel5,slc30a10,LOC107568027,LOC102210471,LOC102788175,LOC108441457,LOC103458748 coding upstream 231222 9667681 ~ 9672528 (+)
faua fau,LOC108411505,LOC105017549 coding upstream 272641 9627578 ~ 9631109 (+)
prpf39 prpf39 coding upstream 277640 9618830 ~ 9626110 (+)
LOC113545275 LOC108257654 coding upstream 326192 9574351 ~ 9577558 (+)
LOC113545265 c25h14orf37,LOC107717645,LOC107659812,LOC107574488,LOC107713862 coding upstream 351809 9542408 ~ 9551941 (+)
exoc2 exoc2,LOC107721345,LOC107711641,LOC107665386,LOC107659211 coding downstream 140638 10091369 ~ 10121300 (+)
LOC113545207 LOC108257895 coding downstream 186258 10136989 ~ 10140336 (+)
LOC117599727 LOC108261516,LOC108257915 coding downstream 220061 10170792 ~ 10186791 (+)
katnbl1 katnbl1 coding downstream 415437 10366168 ~ 10374001 (+)
emc7 emc7,LOC107549094,LOC107671783,LOC107721381,LOC107756596,LOC107601948 coding downstream 423832 10374563 ~ 10378224 (+)
G292929 NA non-coding upstream 35141 9868149 ~ 9868609 (+)
G292754 arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149,LOC101063995 non-coding upstream 287159 9613425 ~ 9616591 (+)
G292756 NA non-coding upstream 291138 9611988 ~ 9612612 (+)
G292771 NA non-coding upstream 315847 9587700 ~ 9587903 (+)
G292765 NA non-coding upstream 348943 9554437 ~ 9554807 (+)
G293095 LOC108257535,LOC107682698 non-coding downstream 85720 10036451 ~ 10038355 (+)
G293110 NA non-coding downstream 113034 10063765 ~ 10064011 (+)
LOC117599717 NA non-coding downstream 248118 10198849 ~ 10210998 (+)
G293350 NA non-coding downstream 586233 10536964 ~ 10537640 (+)
G293345 NA non-coding downstream 601510 10552241 ~ 10553007 (+)
LOC113545247 plcb1,LOC108258091 other upstream 724577 9074028 ~ 9179173 (+)
G292216 trmt6 other upstream 906754 8993513 ~ 8996996 (+)
LOC113545369 NA other upstream 1369250 8488647 ~ 8534500 (+)
nudt14 nudt14,LOC107718404,LOC107683965 other upstream 1829306 8043386 ~ 8074444 (+)
atp5mpl NA other upstream 2121742 7777597 ~ 7782008 (+)
LOC117599798 NA other downstream 208224 10158955 ~ 10170739 (+)
LOC117599733 NA other downstream 730579 10681310 ~ 10682664 (+)
G293528 NA other downstream 1067675 11018406 ~ 11024973 (+)
pak6b pak6,LOC108257961,LOC108411385 other downstream 1610691 11561422 ~ 11579249 (+)
rps29 NA other downstream 1773250 11723981 ~ 11725332 (+)

Expression


Co-expression Network