Gene
RNA
| Item | Value |
|---|---|
| gene id | G295818 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 14664093 ~ 14664381 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU350355 | True | 289 | lncRNA | 0.32 | 1 | 14664093 | 14664381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| scara3 | scara3 | coding | upstream | 4147 | 14645633 ~ 14659946 (+) |
| reps1 | reps1,LOC107727647 | coding | upstream | 43195 | 14597191 ~ 14620898 (+) |
| papola | papola | coding | upstream | 240921 | 14403617 ~ 14423172 (+) |
| trnas-gcu_9 | NA | coding | upstream | 283519 | 14380493 ~ 14380574 (+) |
| trnas-gcu_8 | NA | coding | upstream | 285234 | 14378778 ~ 14378859 (+) |
| esco2 | esco2 | coding | downstream | 32900 | 14697281 ~ 14707028 (+) |
| hddc2 | hddc2 | coding | downstream | 173563 | 14837944 ~ 14841301 (+) |
| serinc1 | serinc1,LOC107598085,LOC107675084,LOC107675227 | coding | downstream | 650672 | 15315053 ~ 15322483 (+) |
| trnaa-cgc_8 | NA | coding | downstream | 671803 | 15336184 ~ 15336256 (+) |
| LOC113532226 | LOC108257938 | coding | downstream | 820710 | 15485091 ~ 15487397 (+) |
| G295787 | NA | non-coding | upstream | 32933 | 14627102 ~ 14631160 (+) |
| G295766 | NA | non-coding | upstream | 89298 | 14556729 ~ 14574795 (+) |
| trnas-gcu_22 | NA | non-coding | upstream | 262618 | 14401394 ~ 14401475 (+) |
| trnas-gcu_21 | NA | non-coding | upstream | 264714 | 14399298 ~ 14399379 (+) |
| trnas-gcu_20 | NA | non-coding | upstream | 266161 | 14397851 ~ 14397932 (+) |
| G295822 | NA | non-coding | downstream | 1151 | 14665532 ~ 14665767 (+) |
| G295852 | NA | non-coding | downstream | 53904 | 14718285 ~ 14719968 (+) |
| G295896 | NA | non-coding | downstream | 111342 | 14775723 ~ 14775932 (+) |
| G295917 | NA | non-coding | downstream | 178669 | 14843050 ~ 14870272 (+) |
| G296181 | NA | non-coding | downstream | 641180 | 15305561 ~ 15305765 (+) |
| trnas-gcu_16 | NA | other | upstream | 276536 | 14387476 ~ 14387557 (+) |
| trnas-gcu_14 | NA | other | upstream | 278588 | 14385424 ~ 14385505 (+) |
| trnas-gcu_13 | NA | other | upstream | 279706 | 14384306 ~ 14384387 (+) |
| trnas-gcu_11 | NA | other | upstream | 281341 | 14382538 ~ 14382752 (+) |
| arid1b | arid1b,LOC108444017 | other | upstream | 359402 | 14240519 ~ 14304691 (+) |
| trdn | trdn,fbrsl1 | other | downstream | 459386 | 15123767 ~ 15189612 (+) |
| G296138 | NA | other | downstream | 559265 | 15223646 ~ 15305400 (+) |
| G296430 | LOC108257881,LOC107603058 | other | downstream | 1502017 | 16166398 ~ 16180232 (+) |
| G296562 | NA | other | downstream | 1649882 | 16314263 ~ 16315126 (+) |
| G296825 | NA | other | downstream | 1932769 | 16597150 ~ 16597787 (+) |
