XLOC_005265 (BX322603.1)


Basic Information

Item Value
gene id XLOC_005265
gene name BX322603.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 16743052 ~ 16746547 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010126
ATGATGTTTGCTTTGCTCGTCACGCTGTGCATAAGTGCAGTGTTTGCTGCTCCATCTATAGACATCCAGTAAGACGACCACTGGAACTCCTGGAAGAGCCAGCATGGAAAAAGCTATCATGAGGACGTAGAGGTCAAGAGGAGAATGATTTGGGAGGAGAACTTGAGAAAAATTGAGCAACACAACTTTGAGTATTCCTATGGAAATCACACCTTTAAAATGGGAATGAATCAGTTTGGTGACATGACAAATGAGGAGTTCAGACAGGCAATGAATGGTTATAAGCATGACCCCAACCGGACGTCACAGGGCCCGTTGTTCATGGAACCCAGCTTTTTTGCAGCCCCAACAGGTTGACTGGAGACAGAGGGGCTATGTTACTCCTGTCAAAGACCAGAAACAATGTGGATCTTGCTGGTCTTTCAGTTCAACGGGTGCCTTGGAAGGTCAGCTCTTCCGTAAAACTGGAAAGCTGATTTCTATGAGTGAGCAAAACTTGGTGGACTGTTCCAGACCACAGGGCAATCAAGGGTGTAATGGAGGCCTCATGGATCAGGCCTTCCAGTATGTTAAAGAAAACAAGGGGCTGGATTCTGAGCAGTCATACCCTTATCTTGCAAGGGATGATCTGCCATGCCGCTATGACCCCCGTTTTAATGTCGCTAAAATCACCGGATTCGTGGACATCCCCAGAGGTAATGAGCTTGCTCTAATGAATGCTGTTGCTGCTGTGGGTCCTGTATCTGTTGCTATTGACGCATCACATCAATCCCTACAGTTCTATCAGTCTGGCATCTATTATGAGAGAGCATGTACCAGTCGACTTGATCATGCAGTCTTGGTGGTTGGCTATGGTTATCAGGGTGCTGATGTTGCTGGGAATAGATACTGGATTGTGAAGAACAGCTGGTCTGACAAATGGGGTGACAAAGGCTACATCTACAtggcaaaagacaaaaacaatcaCTGTGGCATTGCGACAATGGCCAGCTATCCCCTAATGTAA
>TCONS_00011112
ATTCAAAAAGATTTGCTTGCGAAATTCCTCCAGGCAGGATGATGTTTGCTTTGCTCGTCACGCTGTGCATAAGTGCAGTGTTTGCTGCTCCATCTATAGACATCCAGTAAGACGACCACTGGAACTCCTGGAAGAGCCAGCATGGAAAAAGCTATCATGAGGACGTAGAGGTCAAGAGGAGAATGATTTGGGAGGAGAACTTGAGAAAAATTGAGCAACACAACTTTGAGTATTCCTATGGAAATCACACCTTTAAAATGGGAATGAATCAGTTTGGTGACATGACAAATGAGGAGTTCAGACAGGCAATGAATGGTTATAAGCATGACCCCAACCGGACGTCACAGGGCCCGTTGTTCATGGAACCCAGCTTTTTTGCAGCCCCAACAGGTTGACTGGAGACAGAGGGGCTATGTTACTCCTGTCAAAGACCAGAAACAATGTGGATCTTGCTGGTCTTTCAGTTCAACGGGTGCCTTGGAAGGTCAGCTCTTCCGTAAAACTGGAAAGCTGATTTCTATGAGTGAGCAAAACTTGGTGGACTGTTCCAGACCACAGGGCAATCAAGGGTGTAATGGAGGCCTCATGGATCAGGCCTTCCAGTATGTTAAAGAAAACAAGGGGCTGGATTCTGAGCAGTCATACCCTTATCTTGCAAGGGATGATCTGCCATGCCGCTATGACCCCCGTTTTAATGTCGCTAAAATCACCGGATTCGTGGACATCCCCAGAGGTAATGAGCTTGCTCTAATGAATGCTGTTGCTGCTGTGGGTCCTGTATCTGTTGCTATTGACGCATCACATCAATCCCTACAGTTCTATCAGTCTGGCATCTATTATGAGAGAGCATGTACCAGTCGACTTGATCATGCAGTCTTGGTGGTTGGCTATGGTTATCAGGGTGCTGATGTTGCTGGGAATAGATACTGGATTGTGAAGAACAGCTGGTCTGACAAATGGGGTGACAAAGGCTACATCTACAtggcaaaagacaaaaacaatcaCTGTGGCATTGCGACAATGGCCAGCTATCCCCTAATGTAA
>TCONS_00010127
ATTCAAAAAGATTTGCTTGCGAAATTCCTCCAGGCAGGATGATGTTTGCTTTGCTCGTCACGCTGTGCATAAGTGCAGTGTTTGCTGCTCCATCTATAGACATCCAGTAAGACGACCACTGGAACTCCTGGAAGAGCCAGCATGGAAAAAGCTATCATGAGGACGTAGAGGTCAAGAGGAGAATGATTTGGGAGGAGAACTTGAGAAAAATTGAGCAACACAACTTTGAGTATTCCTATGGAAATCACACCTTTAAAATGGGAATGAATCAGTTTGGTGACATGACAAATGAGGAGTTCAGACAGGCAATGAATGGTTATAAGCATGACCCCAACCGGACGTCACAGGGCCCGTTGTTCATGGAACCCAGCTTTTTTGCAGCCCCAACAGGTTGACTGGAGACAGAGGGGCTATGTTACTCCTGTCAAAGACCAGAAACAATGTGGATCTTGCTGGTCTTTCAGTTCAACGGGTGCCTTGGAAGGTCAGCTCTTCCGTAAAACTGGAAAGCTGATTTCTATGAGTGAGCAAAACTTGGTGGACTGTTCCAGACCACAGGGCAATCAAGGGTGTAATGGAGGCCTCATGGATCAGGCCTTCCAGTATGTTAAAGAAAACAAGGGGCTGGATTCTGAGCAGTCATACCCTTATCTTGCAAGGGATGATCTGCCATGCCGCTATGACCCCCGTTTTAATGTCGCTAAAATCACCGGATTCGTGGACATCCCCAGAGGTAATGAGCTTGCTCTAATGAATGCTGTTGCTGCTGTGGGTCCTGTATCTGTTGCTATTGACGCATCACATCAATCCCTACAGTTCTATCAGTCTGGCATCTATTATGAGAGAGCATGTACCAGTCGACTTGATCATGCAGTCTTGGTGGTTGGCTATGGTTATC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096563

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010126 False 1006 transcribed_unprocessed_pseudogene 0.46 7 16743052 16746316
TCONS_00011112 False 1044 lncRNA 0.46 8 16743052 16746547
TCONS_00010127 True 898 processed_transcript 0.46 7 16743282 16746547

Neighbor

gene id symbol gene type direction distance location
XLOC_005264 ctslb coding downstream 22618 16691584 ~ 16720434 (-)
XLOC_005263 BX465840.2 coding downstream 88257 16654681 ~ 16654795 (-)
XLOC_005262 si:dkey-239j18.3 coding downstream 106425 16634442 ~ 16636627 (-)
XLOC_005261 ctslb coding downstream 123295 16617138 ~ 16619757 (-)
XLOC_005260 BX465840.1 coding downstream 144195 16598743 ~ 16598857 (-)
XLOC_005266 zgc:174154 coding upstream 12425 16758972 ~ 16764751 (-)
XLOC_005267 si:dkey-269i1.4 coding upstream 128098 16874645 ~ 16877136 (-)
XLOC_005268 ctslb coding upstream 149097 16895644 ~ 16898140 (-)
XLOC_005269 BX000534.2 coding upstream 155098 16901645 ~ 16901759 (-)
XLOC_005270 si:dkey-26g8.5 coding upstream 172864 16919411 ~ 16923162 (-)
XLOC_005258 FO704724.2 non-coding downstream 170743 16572195 ~ 16572309 (-)
XLOC_005255 CABZ01044816.1 non-coding downstream 249584 16493352 ~ 16493468 (-)
XLOC_005250 NA non-coding downstream 883183 15857732 ~ 15859869 (-)
XLOC_005272 NA non-coding upstream 195657 16942204 ~ 16943248 (-)
XLOC_005273 NA non-coding upstream 218109 16964656 ~ 16966808 (-)
XLOC_005275 BX000534.1 non-coding upstream 250659 16997206 ~ 16998442 (-)
XLOC_005289 dre-mir-2192 non-coding upstream 960245 17706792 ~ 17706901 (-)

Expression


Co-expression Network