Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_005266 |
| gene name | zgc:174154 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 16758972 ~ 16764751 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| zgc:174154 | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in immune response and proteolysis involved in cellular protein catabolic process. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space and lysosome. |
| id | name | namespace |
|---|---|---|
| GO:0006955 | immune response | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0005764 | lysosome | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008234 | cysteine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-071004-116 | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in immune response and proteolysis involved in cellular protein catabolic process. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space and lysosome. |
| ensembl_id | ENSDARG00000075527 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00010128 | True | 1288 | mRNA | 0.43 | 8 | 16758972 | 16764751 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_005265 | BX322603.1 | coding | downstream | 12425 | 16743052 ~ 16746547 (-) |
| XLOC_005264 | ctslb | coding | downstream | 38538 | 16691584 ~ 16720434 (-) |
| XLOC_005263 | BX465840.2 | coding | downstream | 104177 | 16654681 ~ 16654795 (-) |
| XLOC_005262 | si:dkey-239j18.3 | coding | downstream | 122345 | 16634442 ~ 16636627 (-) |
| XLOC_005261 | ctslb | coding | downstream | 139215 | 16617138 ~ 16619757 (-) |
| XLOC_005267 | si:dkey-269i1.4 | coding | upstream | 109894 | 16874645 ~ 16877136 (-) |
| XLOC_005268 | ctslb | coding | upstream | 130893 | 16895644 ~ 16898140 (-) |
| XLOC_005269 | BX000534.2 | coding | upstream | 136894 | 16901645 ~ 16901759 (-) |
| XLOC_005270 | si:dkey-26g8.5 | coding | upstream | 154660 | 16919411 ~ 16923162 (-) |
| XLOC_005271 | zgc:174855 | coding | upstream | 174056 | 16938807 ~ 16951646 (-) |
| XLOC_005260 | BX465840.1 | non-coding | downstream | 160115 | 16598743 ~ 16598857 (-) |
| XLOC_005258 | FO704724.2 | non-coding | downstream | 186663 | 16572195 ~ 16572309 (-) |
| XLOC_005255 | CABZ01044816.1 | non-coding | downstream | 265504 | 16493352 ~ 16493468 (-) |
| XLOC_005272 | NA | non-coding | upstream | 177453 | 16942204 ~ 16943248 (-) |
| XLOC_005273 | NA | non-coding | upstream | 199905 | 16964656 ~ 16966808 (-) |
| XLOC_005275 | BX000534.1 | non-coding | upstream | 232455 | 16997206 ~ 16998442 (-) |
| XLOC_005289 | dre-mir-2192 | non-coding | upstream | 942041 | 17706792 ~ 17706901 (-) |
