G299005



Basic Information


Item Value
gene id G299005
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 21022242 ~ 21022860 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU354211
acacacacacacctgtaacctGCTtatacactccacacacacacacacacctgtaacctGCTtatacactccacacacacactccacaaaacacacacacacctgtaacctGTAACCTGCTTATACAccccacaaaacacacacacacacctgtaacctGCTtatacactccacacacacactccacaaaacacacacacacacctgtaacctGCTtatacactccacacacacacaccactccacacacacactaaacacacacacacacacctgtaacctGCTtatacactccacacacacactccacaaaacacacacacacctgtaacctGCTtatacactccacacacacacacactccacaaaacacacacacacctgtaacctGCTtatacactccacacacacactccaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU354211 True 419 lncRNA 0.47 2 21022242 21022860

Neighbor


gene id symbol gene type direction distance location
LOC113525589 LOC108258028 coding downstream 23168 20995801 ~ 20999074 (-)
LOC117595662 LOC108258028 coding downstream 31571 20985188 ~ 20990671 (-)
trnae-uuc_17 NA coding downstream 271671 20750500 ~ 20750571 (-)
LOC113524743 LOC108258194 coding downstream 272102 20742070 ~ 20750140 (-)
LOC113524752 NA coding downstream 369030 20613722 ~ 20653212 (-)
LOC113524825 LOC108270753,LOC108273546,LOC108257668,LOC108261406,LOC108264971,LOC108270747,LOC108273692,LOC108273691,LOC108261167 coding upstream 70617 21093477 ~ 21112429 (-)
LOC117599722 LOC108257668,LOC108270747,LOC108261406,LOC108263642,LOC108273692,LOC108270753 coding upstream 97088 21119948 ~ 21126084 (-)
LOC113524826 LOC108270753,LOC108273691,LOC108261257,LOC108257668,LOC108260129 coding upstream 112717 21135577 ~ 21171717 (-)
LOC113524822 LOC108257668,LOC108261406,LOC108270747,LOC108273546,LOC108263642,LOC108274210,LOC108270753 coding upstream 166563 21189423 ~ 21197043 (-)
trnae-uuc_18 NA coding upstream 187322 21210182 ~ 21210253 (-)
LOC113524815 NA non-coding downstream 2095 21016662 ~ 21020147 (-)
LOC113524835 NA non-coding downstream 3390 21018073 ~ 21018852 (-)
trnar-ucu_11 NA non-coding downstream 62654 20959496 ~ 20959588 (-)
trnai-uau_9 NA non-coding downstream 64519 20957631 ~ 20957723 (-)
G298934 NA non-coding downstream 72170 20949842 ~ 20950072 (-)
G299007 NA non-coding upstream 1264 21024124 ~ 21029143 (-)
G299018 NA non-coding upstream 45854 21068714 ~ 21068938 (-)
G299019 NA non-coding upstream 47977 21070837 ~ 21071111 (-)
G299026 NA non-coding upstream 59661 21082521 ~ 21082826 (-)
G299032 NA non-coding upstream 92772 21115632 ~ 21132002 (-)
G298875 NA other downstream 357702 20655999 ~ 20664540 (-)
LOC117599698 NA other downstream 579950 20439620 ~ 20442292 (-)
trnah-gug_25 NA other downstream 643337 20378834 ~ 20378905 (-)
trnae-uuc_13 NA other downstream 643866 20378305 ~ 20378376 (-)
trnah-gug_24 NA other downstream 651963 20370208 ~ 20370279 (-)
G299022 NA other upstream 50066 21072926 ~ 21073676 (-)
LOC117599725 NA other upstream 569414 21592274 ~ 21596968 (-)
srsf5a srsf5,srsf5a,LOC107553206,LOC108411053,LOC107683426,LOC107736490,LOC107602962 other upstream 949221 21972081 ~ 22067610 (-)
G299449 NA other upstream 973254 21996114 ~ 22000833 (-)
LOC113525507 lipg other upstream 1001756 22024616 ~ 22032359 (-)

Expression



Co-expression Network