G299022


Basic Information

Item Value
gene id G299022
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 21072926 ~ 21073676 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU354232
AAAGACAATACACTTGGACCCATGTTCGTGATAACACGATTTCATTGGCAAGACTGGAtaggttttatgtttttaaacatcatgGTAGTATTGTTCAGAGTTGTGTTATTATCCCATCATGTCTTTCAGATCATAGTATGGTGCAGTGTTGTATCTTTTTAAACTCTATTAAGCCAAAGAGTGCTTATTGGCATCTAAATACCACCTTATTGGATGATAAgtgttttaaagaaagttttaaaaatttctGGGATGTTTTTAAAACTACAAAGAATTCTTTTAGAACACTGCAGCAATGGTGGGATTTTGGGAAAGTTCAGATAAAACAGTTTTGTCAACAATACTCCCAGAATATCACTAGAGAGATAACCCTGACTTTGAACACCTTAGAgactgatattttaaaattgcaaGAATTGGCTCACTTGCCTGGGAATCAAAGTGATGTGGAGTCTCttataaaaaacaagaaaactcAGTTGTCTGATCTACTAGGGGTTAAAACACAGGGTGCTCTGGTCAGGTCACGTTTTTTAAGTGTAAATGAGATGGATGTACcctcaaggttttttttcagtttggaaagaaaaaatggaCAGAACAGGGTTATTCATGCTTTACGTTCTGAATCTGGGGTATTGCTGACTGACCCCAAAGACATTCGTAAGAGAGCAGTCACTTTTTACGagtctttatataaaaatgaactgaGTCCAGATTATAGGCATGATAGTGATTTCTTTGACAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU354232 True 751 TUCP 0.36 1 21072926 21073676

Neighbor

gene id symbol gene type direction distance location
LOC113525589 LOC108258028 coding downstream 73852 20995801 ~ 20999074 (-)
LOC117595662 LOC108258028 coding downstream 82255 20985188 ~ 20990671 (-)
trnae-uuc_17 NA coding downstream 322355 20750500 ~ 20750571 (-)
LOC113524743 LOC108258194 coding downstream 322786 20742070 ~ 20750140 (-)
LOC113524752 NA coding downstream 419714 20613722 ~ 20653212 (-)
LOC113524825 LOC108270753,LOC108273546,LOC108257668,LOC108261406,LOC108264971,LOC108270747,LOC108273692,LOC108273691,LOC108261167 coding upstream 19801 21093477 ~ 21112429 (-)
LOC117599722 LOC108257668,LOC108270747,LOC108261406,LOC108263642,LOC108273692,LOC108270753 coding upstream 46272 21119948 ~ 21126084 (-)
LOC113524826 LOC108270753,LOC108273691,LOC108261257,LOC108257668,LOC108260129 coding upstream 61901 21135577 ~ 21171717 (-)
LOC113524822 LOC108257668,LOC108261406,LOC108270747,LOC108273546,LOC108263642,LOC108274210,LOC108270753 coding upstream 115747 21189423 ~ 21197043 (-)
trnae-uuc_18 NA coding upstream 136506 21210182 ~ 21210253 (-)
G299019 NA non-coding downstream 1815 21070837 ~ 21071111 (-)
G299018 NA non-coding downstream 3988 21068714 ~ 21068938 (-)
G299007 NA non-coding downstream 43783 21024124 ~ 21029143 (-)
G299005 NA non-coding downstream 50066 21022242 ~ 21022860 (-)
LOC113524815 NA non-coding downstream 52779 21016662 ~ 21020147 (-)
G299026 NA non-coding upstream 8845 21082521 ~ 21082826 (-)
G299032 NA non-coding upstream 41956 21115632 ~ 21132002 (-)
LOC117599741 LOC108263642 non-coding upstream 108264 21181940 ~ 21185632 (-)
G299070 NA non-coding upstream 185780 21259456 ~ 21279791 (-)
LOC117599743 NA non-coding upstream 426981 21500657 ~ 21501712 (-)
G298875 NA other downstream 408386 20655999 ~ 20664540 (-)
LOC117599698 NA other downstream 630634 20439620 ~ 20442292 (-)
trnah-gug_25 NA other downstream 694021 20378834 ~ 20378905 (-)
trnae-uuc_13 NA other downstream 694550 20378305 ~ 20378376 (-)
trnah-gug_24 NA other downstream 702647 20370208 ~ 20370279 (-)
LOC117599725 NA other upstream 518598 21592274 ~ 21596968 (-)
srsf5a srsf5,srsf5a,LOC107553206,LOC108411053,LOC107683426,LOC107736490,LOC107602962 other upstream 898405 21972081 ~ 22067610 (-)
G299449 NA other upstream 922438 21996114 ~ 22000833 (-)
LOC113525507 lipg other upstream 950940 22024616 ~ 22032359 (-)
LOC113541916 LOC108262998,LOC794838,LOC105890990,LOC107705434,LOC107602927,LOC108232058 other upstream 996252 22069928 ~ 22082320 (-)

Expression


Co-expression Network