G299449


Basic Information

Item Value
gene id G299449
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 21996114 ~ 22000833 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU354827
GTCATCTCTGAGCGACGGGCTGCTCCAgcgtgtgcagtgtgtgtgcagtgtgtgtgtgtttacagaggaTCAGAACTGAGCTGTGGCGTGTTACTGAGAGAGatggatCTGCAGGTGTCTGTGGTTCTGCAGGTTCTGTCTCAGGCAAGCAGTCAGGACTCGGCTCTGCTCAAACCTGCAGAGGAACAACTGAGACACTGGGAGAACCAACCAGGGTTCTACTCCAtactacaggtacacacacacactcacacacacacacacactctcactcacacacactctctcacacacacacacactctcacacacacacactcacactcacatacacacacacacacactcacacacacactctcacacacacacacactcacctcacacactctcactcacacacacacacacacacactcacacacacatactggttTTTAAGTCTTACGAGGACTTTGCCGGCCAAACCAGTTGAAACGTGGTTTAAG

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU354827 True 488 TUCP 0.51 2 21996114 22000833

Neighbor

gene id symbol gene type direction distance location
kcnk5b LOC108257676 coding downstream 223439 21762566 ~ 21772675 (-)
nt5c1bb LOC108257680,LOC102795473,LOC100693789,LOC102194616,LOC101069542,LOC101468566 coding downstream 245128 21744936 ~ 21750986 (-)
trnav-uac_10 NA coding downstream 263853 21732189 ~ 21732261 (-)
LOC113525042 NA coding downstream 267700 21723735 ~ 21728414 (-)
LOC113525508 NA coding downstream 306806 21685094 ~ 21689308 (-)
G299446 LOC108257678 non-coding downstream 28718 21966356 ~ 21967396 (-)
G299420 NA non-coding downstream 104613 21890815 ~ 21891501 (-)
G299375 NA non-coding downstream 178880 21808400 ~ 21817234 (-)
G299366 NA non-coding downstream 251344 21743179 ~ 21744770 (-)
G299359 NA non-coding downstream 279652 21714903 ~ 21716462 (-)
LOC117599725 NA other downstream 399146 21592274 ~ 21596968 (-)
G299022 NA other downstream 922438 21072926 ~ 21073676 (-)
G298875 NA other downstream 1331574 20655999 ~ 20664540 (-)
LOC117599698 NA other downstream 1553822 20439620 ~ 20442292 (-)
trnah-gug_25 NA other downstream 1617209 20378834 ~ 20378905 (-)
LOC113525507 lipg other upstream 23783 22024616 ~ 22032359 (-)
LOC113541916 LOC108262998,LOC794838,LOC105890990,LOC107705434,LOC107602927,LOC108232058 other upstream 69095 22069928 ~ 22082320 (-)

Expression


Co-expression Network