evlb (evlb,LOC108258102,LOC108411639,LOC103359910)


Basic Information

Item Value
gene id evlb
gene name evlb,LOC108258102,LOC108411639,LOC103359910
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 9426445 ~ 9463533 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026944431.2
TCCGTCCTCTCAGAGAGAgctctgttctttcttttttcttttttttatctactaATTTCTTCTTCTCTGGTGTGATATTCTGTCAGGATTGATTCAGTGAGGATGAGATTACTCATCATTTCCTTCTTACTAAGAACATCTTAGCATTTCATtacttcctttcatttttttcaatgcaAATTCCTTCCAAGGCCATTGTTCAGCCGAGTGTCTGctatgtgaatgtgtttgtgtgtgtgtgtgtgtgtgatggaaggTGAAGTGAGATCAGGCAGCTTGCTCTGCCCTTTGTGCAACTCCTGCTCGGATAAGATGCTGTTGCTCTTTCAGTCTTTGAACCGAATGCTACATTGAGTGGAGGAGGAGTCCAGCTTACAGCCCACTGAGCGATAGAACAAGTGAACGAGAGAATCTGTTCGTCTGCTATGACCCAAAACAATGGATATTAACCTGCAGTCACATCGCTTCTACTTCCCCCAGATCTACTGTGACGCCAACGCTCAGGTCATTGAGTATAAGCTCAGTGAACAGAGTATTTGCCAGGCCCGTGCCTCTGTAATGGTCTACGATGACACCAGCAAGAAGTGGGTGCCCATCAAACCAGGCCAACAAGGCTTCAGTCGCATCAACATCTACCACAACACTGCCAGCAACACCTTCCGTGTGGTGGGGGTCAAACTGCAGGATCAGCAGGTTGTCATTAACTACTCTATTGTAAAGGGGCTGAAGTATAATCAGGCCACTCCTACATTTCACCAGTGGCGTGATGCCAGGCAGGTGTATGGACTCAACTTTGCCAGTAAGGAGGAGGCCACCACCTTCTCCAACGCCATGCTGTTTGCCCTCAATGTGCTCAGTACCCAGGAGGCAGGTCCAGCAGTTCAGCGCCAGGTACAGAACGGCCCCACAGCGGAAGAACTGGAGGTGCAGAGAAGACAGATGGagatgcagcagcagcaacagcagcagcagcaaatgCAGGCACATATTGAGAGAGAGCGACGCTCATCCAACTCAGGCTCCCCATTTCAGGGACATCCCGCAGTGCTCTCGGTGGCACCTCCAAGCATAGTGCCACCCGTCATGTCAATTGGAAGCCCATgcccacctccacctcctcctcctgcacCTCCCGGGCCTCCTCCTCCAGCAGCAGGAGCCCCTCCTCCTCCACCGCCCTTACCTCTGGGTGGAGGTGGGTATGGaggtcatcatcatcatcatcacgagGATGCGCACGCACCCACCGGCCTCGCTGCCATGATCGCTGGGGCCAAACTGCGCCGAGTGCAGAGGCCTGACGAGAGTTCAGGAGCCAAAAACGATGCCAATCGGACGAGCGGAGGGAGTGGGGGCCTGATGGAGGAGATGAATGCCCTGCTGGCACGACGACGGAAAGCAGCAAACCAGTCAGAGAAAGATGGAGACTGCCAAAATGATGATGCAAATTCCTCTCCAATGTCTAGAGGACAGAACGCAGATGGTGCAAAGAAGCCATGGGATCGAGCTAACTCTGCAGAGAGATCATCACTGGTATCAAGAGTTCGACCTGTGGGCAGTAGCAGTGACACAGACGCCTTAGACTTGGATAGAATGAAACAAGAAATCTTGGAAGAAGTTGTTCGTGAATTGCACAAGGTGAAAGATGAAATCATTGATGCCATTAGACATGAACTTAGTAGAATTAGCACGACATAATCTCCCAGCCTCATGTGACCCCTCTTTTATGAGCCCTGACCCCTGGCAGGAACCGCTGTAGCTGAAGAGGGGACGACACCCAGCAACGTTACCGCCATGTTAAAGCAAATGTATTAGTTTGCTCTAACATGTAGTCTACCTTGTGGTACCCCTCAGATACAAAACCGGATGGAAGACACTTGCACTGACCTCTCTGTTTTCtggtttaaatttatatttggcAATGACCTTTTCAAGTCTTTAATGTCTTTATAGGAGTTTGTTCTagatgtttttcctttttttggattgcttttattattattattattattattattattattattattattattggtagcAGTGTTTATTTAGGTGGTAGTAGGTATTTATTTagtgatttaataataataataataataataataataataacctgaaCATTGCCCATGTCCACATGTCAGCCTTTTATATTGTTTgacttttattttcctttgtgtTAAAAAGATTTGTTTCTCACCatgattttgtaaaaatgttttttaaactcCTTTTGGCAACACAGATGTGTAACCACTGACAGGAAGGTGGAACATGACACTGGGGGACAGGAGACAAACTTTCTTTTTGGATATTGCgatcttacaaaaaaaaaaaaaaaaacactacaccAGAGTATTTGTGATCATgttgttaataaaatgtttattggcTAAAA
>XM_026944432.2
ACAGcaaactgctctctctctctctctctctctctctctctctctgctggagGATGGAAAGATGGCATCTCCGAAGCCGTTGTCTCTCCACACACTGACTCGCTCCACAGAGACAGCAGTGGCGATCGATGTGAAATGGAAGTGAGGGAGAGATCGGCGGAGCGCAGACGTCCACAAGCAAACCGGAGAGCGTCTCGCGCTTTGGACGCGACACCAAGCGAATCGTTTGTCGCGTTTTTGAAGTCGTCGCGACGGCTTCCAGCATCCGCACATCCCCGGCAGCCTGCCACACAGCCGGCGTGCTAACGGAGCCGTCAGGAGCCTATTAGAAGGATAAGAGACTCGAAACAGAGGCGTGGGAAGTGAATCCAGGGAGAAAAGAGGCCGGGAACGATTTTGCGCAGTCCTCCACACGGAGGGGAGAGGAGAAGGATGAGTGAACAGAGTATTTGCCAGGCCCGTGCCTCTGTAATGGTCTACGATGACACCAGCAAGAAGTGGGTGCCCATCAAACCAGGCCAACAAGGCTTCAGTCGCATCAACATCTACCACAACACTGCCAGCAACACCTTCCGTGTGGTGGGGGTCAAACTGCAGGATCAGCAGGTTGTCATTAACTACTCTATTGTAAAGGGGCTGAAGTATAATCAGGCCACTCCTACATTTCACCAGTGGCGTGATGCCAGGCAGGTGTATGGACTCAACTTTGCCAGTAAGGAGGAGGCCACCACCTTCTCCAACGCCATGCTGTTTGCCCTCAATGTGCTCAGTACCCAGGAGGCAGGTCCAGCAGTTCAGCGCCAGGTACAGAACGGCCCCACAGCGGAAGAACTGGAGGTGCAGAGAAGACAGATGGagatgcagcagcagcaacagcagcagcagcaaatgCAGGCACATATTGAGAGAGAGCGACGCTCATCCAACTCAGGCTCCCCATTTCAGGGACATCCCGCAGTGCTCTCGGTGGCACCTCCAAGCATAGTGCCACCCGTCATGTCAATTGGAAGCCCATgcccacctccacctcctcctcctgcacCTCCCGGGCCTCCTCCTCCAGCAGCAGGAGCCCCTCCTCCTCCACCGCCCTTACCTCTGGGTGGAGGTGGGTATGGaggtcatcatcatcatcatcacgagGATGCGCACGCACCCACCGGCCTCGCTGCCATGATCGCTGGGGCCAAACTGCGCCGAGTGCAGAGGCCTGACGAGAGTTCAGGAGCCAAAAACGATGCCAATCGGACGAGCGGAGGGAGTGGGGGCCTGATGGAGGAGATGAATGCCCTGCTGGCACGACGACGGAAAGCAGCAAACCAGTCAGAGAAAGATGGAGACTGCCAAAATGATGATGCAAATTCCTCTCCAATGTCTAGAGGACAGAACGCAGATGGTGCAAAGAAGCCATGGGATCGAGCTAACTCTGCAGAGAGATCATCACTGGTATCAAGAGTTCGACCTGTGGGCAGTAGCAGTGACACAGACGCCTTAGACTTGGATAGAATGAAACAAGAAATCTTGGAAGAAGTTGTTCGTGAATTGCACAAGGTGAAAGATGAAATCATTGATGCCATTAGACATGAACTTAGTAGAATTAGCACGACATAATCTCCCAGCCTCATGTGACCCCTCTTTTATGAGCCCTGACCCCTGGCAGGAACCGCTGTAGCTGAAGAGGGGACGACACCCAGCAACGTTACCGCCATGTTAAAGCAAATGTATTAGTTTGCTCTAACATGTAGTCTACCTTGTGGTACCCCTCAGATACAAAACCGGATGGAAGACACTTGCACTGACCTCTCTGTTTTCtggtttaaatttatatttggcAATGACCTTTTCAAGTCTTTAATGTCTTTATAGGAGTTTGTTCTagatgtttttcctttttttggattgcttttattattattattattattattattattattattattattattggtagcAGTGTTTATTTAGGTGGTAGTAGGTATTTATTTagtgatttaataataataataataataataataataataacctgaaCATTGCCCATGTCCACATGTCAGCCTTTTATATTGTTTgacttttattttcctttgtgtTAAAAAGATTTGTTTCTCACCatgattttgtaaaaatgttttttaaactcCTTTTGGCAACACAGATGTGTAACCACTGACAGGAAGGTGGAACATGACACTGGGGGACAGGAGACAAACTTTCTTTTTGGATATTGCgatcttacaaaaaaaaaaaaaaaaacactacaccAGAGTATTTGTGATCATgttgttaataaaatgtttattggcTAAAA

Function

symbol description
evlb Predicted to enable SH3 domain binding activity and profilin binding activity. Predicted to be involved in actin polymerization or depolymerization and positive regulation of actin filament polymerization. Predicted to act upstream of or within actin nucleation and protein homotetramerization. Predicted to be located in cytoplasm; cytoskeleton; and lamellipodium. Is expressed in nervous system and trigeminal placode. Orthologous to human EVL (Enah/Vasp-like).

NR:

description
PREDICTED: ena/VASP-like protein isoform X1

GO: NA

KEGG:

id description
K23487 EVL; Ena/VASP-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026944431.2 True 2398 mRNA 0.46 13 9437939 9463533
XM_026944432.2 False 2311 mRNA 0.48 13 9426445 9463533

Neighbor

gene id symbol gene type direction distance location
LOC113545338 LOC108257621 coding upstream 1876 9419110 ~ 9424569 (+)
LOC113545286 LOC108258122 coding upstream 14210 9389746 ~ 9412235 (+)
LOC113545203 NA coding upstream 40650 9384881 ~ 9385795 (+)
LOC113545201 LOC108411733,LOC108258090,LOC107712204,LOC107564327,LOC107659822,LOC107712203 coding upstream 88085 9336792 ~ 9338360 (+)
lamp5 lamp5,LOC107704368 coding upstream 161594 9258394 ~ 9264851 (+)
yy1b yy1a,LOC108258103,LOC108411685,LOC107712210,LOC101066055 coding downstream 448 9463981 ~ 9474164 (+)
entpd5b LOC108257529 coding downstream 31712 9495245 ~ 9505126 (+)
LOC113545265 c25h14orf37,LOC107717645,LOC107659812,LOC107574488,LOC107713862 coding downstream 78875 9542408 ~ 9551941 (+)
LOC113545275 LOC108257654 coding downstream 110818 9574351 ~ 9577558 (+)
prpf39 prpf39 coding downstream 155297 9618830 ~ 9626110 (+)
G292643 NA non-coding upstream 10869 9414551 ~ 9415576 (+)
G292654 NA non-coding upstream 17731 9408492 ~ 9408714 (+)
G292102 NA non-coding upstream 721201 8705054 ~ 8705244 (+)
G292074 NA non-coding upstream 840543 8584219 ~ 8585902 (+)
G292072 NA non-coding upstream 842968 8582950 ~ 8583477 (+)
G292765 NA non-coding downstream 90904 9554437 ~ 9554807 (+)
G292771 NA non-coding downstream 124167 9587700 ~ 9587903 (+)
G292756 NA non-coding downstream 148455 9611988 ~ 9612612 (+)
G292754 arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149,LOC101063995 non-coding downstream 149892 9613425 ~ 9616591 (+)
G292929 NA non-coding downstream 404616 9868149 ~ 9868609 (+)
LOC113545247 plcb1,LOC108258091 other upstream 247272 9074028 ~ 9179173 (+)
G292216 trmt6 other upstream 429449 8993513 ~ 8996996 (+)
LOC113545369 NA other upstream 891945 8488647 ~ 8534500 (+)
nudt14 nudt14,LOC107718404,LOC107683965 other upstream 1352001 8043386 ~ 8074444 (+)
atp5mpl NA other upstream 1644437 7777597 ~ 7782008 (+)
G293016 ileu other downstream 440217 9903750 ~ 9950731 (+)
LOC117599798 NA other downstream 695422 10158955 ~ 10170739 (+)
LOC117599733 NA other downstream 1217777 10681310 ~ 10682664 (+)
G293528 NA other downstream 1554873 11018406 ~ 11024973 (+)
pak6b pak6,LOC108257961,LOC108411385 other downstream 2097889 11561422 ~ 11579249 (+)

Expression


Co-expression Network