aasdh (aasdh)


Basic Information

Item Value
gene id aasdh
gene name aasdh
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 4124058 ~ 4137561 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026944445.2
TTTGCGTCATTTTTGCGCGACATGCGCGATGCTGCTTCACTTGGTGCTTTGGAGCTGGTCTGAGCACTTTAATGTTTTGGTTAACTTTAAGAACGAGCTGCTTCACTTATAAACGTGATAGCGGCTGATGAACAGCGTAATCATGAAGAGTTTGCACGCGATGGTGCACGAGGCTGCTGTTAATCACGGCGATAAAACTGCTGCCATCTTCGACACCGGCGCGTCGCCTGCTAGCTGCCTGACCTATGATCAACTCCTAGCGTTAGGAAACGAGCTTTGCAAAAATGTGCAGGGAGCAGTAGGAGAGAATGAACAGGTCATCGGTGTGTTCTGTGATGTGAACATCCTCCTCCCGGTCTGGATCTTTGGTGTCCTGCAGGTGCCTGCTGCCTATGTTCCGCTGAACCCAGGCTCACCCCCTCTGCTTACCATGAGAATAATGGACAGATGTCATCTGAAGTTCTGCTTGATACAGAGCACTTTGCTGCAGCAATTCCAGAGTGCCTTTTCCGGGTTACTGTCAATTGAAGTGTTTGCAGCCTGGTCAGCACATAAGCTTACTTTAGTGAAGCTTCACAAAAATTCACTGATGTCGCCTGAAGCAAGCAACAGACGGCCGATGGAAGATAATCAGACGTTAAAGACAGAGCAGGAGGAAAGGCAGCATCCCAGTGCCGATGCTCCTGGAAAGGAATTAGCATATGTTCTGCACACATCTGGAACAACAGGGCTTCCTAAAATAGTAAAAGTTCCACACAAGTGTATTGTGCCTAATATAGTACATCTCAGCTCTTTATTTCAGATGACCCCAGAGGATGTAGTGTTCCTCGCATCACCTTTAACCTTTGACCCTTCCGTGGTGGAGATGTTTTTGGCCCTGTCTTCTGGAGCTTGTCTTCTGATGGTTCCCTCCGCTGTGAGAAGGATGCCTGGCAGACTAGCCAATGTGTTGTTTAGACGAAACACCACCACCGTTTTACAGGCCACCCCGACTCTGCTGAGGCGCTTTGGGGGACGTGTCCTGCAGGAGGAGATACTCAGTGCAGGCTCCTCGTTGAGGGTGTTGGCTTTGGGAGGAGAGGTCTGTCCATCGCTGTTTGTCCTCAACAGCTGGAGACAAACGGGTAACAAGACGCGTATTTATAATCTCTACGGCACCACAGAAGTTTCTTGCTGGGCTTGTTGCCACAGACTGCCAGACAATCTCCTCTTCTCAGACCACATGGACAATGGATCTGTGCCTCTGGGGGAACCGCTCATGGACACTGCTGTGGAAGTGAGAGATGAGAATGGACGTCTGGTCACTGAAGGAGAGGGACAGGTCTTCAtagGCGGTCAGGAGAGAGTATGCTTACTAGACGGTGAGACGATGACTGCTGCCAAAGGAGTGATGCGTGCTACAGGGGACTGGGTGATGGTGCAGAACTCGCACCTCTATTACTTGGGTAGGAAGGACCGGCTGGTCAAAAGGCATGGTCAGATGCTACACCTGGATGCCTTACAACAGGCCATGGAACGCTTGCCTCAGGTAGAAGCTGGTGTGGTGGGTCTGCATGAGAACAGCAGATTGGTGGCTTTTGTGGTGCCCACAATTGACACAAGAACCGTGTCCTCTGAACACAGTGGCAACCAAGAACAGCATGTGCACAGCTCCACTAAGGACTCAGAAGACTCTCGTGTTTCCTCCAGAGCTCTAGAGATGGAAGTGCTACGAGGACTGTCTCAACTTGTGCCCAATCACAGCATTCCAGATACTGTATTATTGGTCCCTGCCCTGCCACTCACTAATCATGGTAAAGTGGCCATGGAGAAGCTGATGAGGTtgtatgagagacagagagaggttaGCGATAAGCACACCAGAATGGGAGACATGGAGACTGTGAGAGAAAGACTACAGGCACTATGGAAGgagTGTCTAGGTCTTTGTGATGATGGAGTTGTCACAGACGATGCACACTTCATGTTAAGTGGCGGGGATTCTCTACAAGCCCTGCGCCTCTTCGATTACATcactgttactatggaaacggcTTCTGCGGGTCTGCTGGAGGTCATTCTAGATGGCTCTTTTTCAGATGTCCTGAAACACATCACAGCAACCCACCAAAATCCTATCAAGACATCAGGCAAAAGACAAGCTGAAGATTCTGCATCTGTTGTTCCATCTAAGAGGTACCACACAGAAGTTGACTCAAACTTCGACCCTGAGGGGATTTTGCCACCTGTGGTGTCCTCAGAGAGAAGCAATATGAGATTTGTAGTTGTCCGTAGAGCTGGAGGTGTTGTATTTTGggattactttttaaaaagagagCAAAGACTTGTTACAAATTCAACAGGAGCCAGTGACAACATGGACAAGATACAAGAGAATTATCCAAGTGCAGAACcattatttataagcaaaccAAGTCAGCAGTGTAACGCAGGAAGTGGTGTTACTACACAATCAGGCATTACAAAAGACAGCCAACCCCTGGGCCTGCAGGTCTGTTGGAGTTCTGACACGGGCAGATGTGTGGACGCTTCACCAGTGTTGCTGATAGGTCCTGAGCGAGCCACTGTGTTTATTGGCTCTCACTCGCACAGACTGCAGGCTCTGGACCTGAGCAGCGGAGAGGTGGTGTGGGAGCGTGTGCTTGGGGACCGACTGGAATCTTCTGCTGCGGTTTCTAAATGTGGAACCCTGGTGGCATTAGGGTGTTATGATGGGCAGGTGTATTTTCTGAGTGTGGCCTCGGGGGAGACGTGCTGGGTGTTTAAGACAGGAGATGCAGTGAAGAGTTCTCCTGTTGTAGACCCTCAGACTGGACTGGTTATCATCGGTTCCCACGACGGACATGTCTACGCGTTAGAACCACTGgtgaagCGTTGTGTGTGGACATACTATTGTGGAGGTGGTGCGGTGTTTTCTTCCCCCTGTGTCCACTCCTCTCCCAGGCGGCTATACTCAGCCACACTACGAGGGCAGCTCCATTGCCTCAGTCCGgaCAGCGGTAAAGTCTTGTGGACGCATTGCACTGATGTtccatttttctcttctccttcctGTTCCGACTCCTGTGTCTGCATTGGTTCAGTGAATGGACAGATCAGTGCATTAAGCCATGATGGACATATGTTATGGAATTTTCTCACCGATGGACCTGTCTTCTCATCGCCATGCCTGGCCTCATTACCACCTTCAACCAATCAGAGAACCAGAGCTGGAGCATACGATGGTTGCACGACATTATCTCCAGCTTATCAAGCTGTTTTTTGTGGGTCACATGATTGCTCCGTATATTGTATCAATTCTGCTGATGGATCCTTACTATGGCGCTTCCAAACCACAGGCAAGGTGTATTCCAGTCCTTTTGTTTTTGATGGTGCTCCCTGGGGCATAAGAACCCTGGTAGCCGTAGCTTCAACGGATGGAACACTGTGGGTACTTGATGGAGAACAGGGAACACTCAAAGCCTCTTTCTTCTTACCTGGAGAGCTCTTCTCCTCTCCTATCGTGTGGGGTCACACTATAGTCGTGGGATGTCGGAATGACTATGTGTACTGCTTGGAACTGACTAGCAGGAAGGAATAACTAAAGCAACTCTCAGTACAATATGTAAAATGTTCCTACTGGTTAAATGTGTAGATGGCCATGTAACGTATGTAAAACTCTCTAGAATAATAGCAGCACTTTAGCACTATGTACTCGTATTAAATTGTACAGatgttaatatataatttatattatataacatctgtctttaatgtttttttttctacagaattCATAACATTGGTATTATTTAAGAATCTTCTCATGAGTACCTTTTGTAAATGGAAcagaaaaaagtgcaaataccaacaaactgcttttatttcaatGTTACATACAACACTGGTTTGACGCTACACGTTTGCACAcaatcaaattaaaaacaaagcgACGGAACTCAGGGATCTTCAAAGGAACACAGTGCAGTTCAGTCCACGTCTGTACATAAATAcctacatacattacatacatacatacaaaatattacGGTAAGTAGAGGGGGTTGGTGTTTTGCTGGGAGATCAAGGCTTTCTATGAGTTCGAAGCTGTTGTTATTTCAGAGAATAATGTCCTTTCCTCTGCAAAGTCATTATTTAGTCTTCCCCcggcaggattttttttaaagcactgatCTCCCACTGACTTGCTTTTAATGTCTGATACAAGAAGAGCTAGGACAAGCTACAGGATAATAGTGTTTCTATTACAGCAAGCAAGCAGTCTGTGTTCCAGAGAAATATTTCCAAAGAAACTGGAGGGCATAAACACTGTGCAAGAAGCAAATAGTTCATTAAcatttggttaatggtttccagTGAAATGATTTAACATGGTGGTTGAACAGAAGTGTCATTAATAACATTTACTATGTAAGTTATTTACATAAGTAAACACAGTGACTGTCATCATTATGTTAATTTTCAGTGACAGCTTAAATGACAGCAGTCATTTGTCACACAGTGAAAATCTTGGCCAAGATATCAAATAGGTTAATAGTCACAAAGAAAATGAGAATTAACCTTGTCCATATTAGACAAGGGGTGTTAAGACAatttaacaaatacatttttgaaatgTCAGGACTGGAATctagacttaaaaaaaaaaaaatacaaaaacagtagCCAGTTCTGAAGTTCATGCTTGTAATACATATCAGGGGGTGAAGTAGGATGTTTGTTATGGTGACACCTACTGTGCAACTTTAGCCCTTGAGTGAGTTCTTAAAAGACTCCCCAAAGAATTTATCACAAACTGTTAAAGAAGATGTGACTC
>XM_026944446.2
AGTGCCGATGCTCCTGGAAAGGAATTAGCATATGTTCTGCACACATCTGGAACAACAGGGCTTCCTAAAATAGTAAAAGTTCCACACAAGTGTATTGTGCCTAATATAGTACATCTCAGATGACCCCAGAGGATGTAGTGTTCCTCGCATCACCTTTAACCTTTGACCCTTCCGTGGTGGAGATGTTTTTGGCCCTGTCTTCTGGAGCTTGTCTTCTGATGGTTCCCTCCGCTGTGAGAAGGATGCCTGGCAGACTAGCCAATGTGTTGTTTAGACGAAACACCACCACCGTTTTACAGGCCACCCCGACTCTGCTGAGGCGCTTTGGGGGACGTGTCCTGCAGGAGGAGATACTCAGTGCAGGCTCCTCGTTGAGGGTGTTGGCTTTGGGAGGAGAGGTCTGTCCATCGCTGTTTGTCCTCAACAGCTGGAGACAAACGGGTAACAAGACGCGTATTTATAATCTCTACGGCACCACAGAAGTTTCTTGCTGGGCTTGTTGCCACAGACTGCCAGACAATCTCCTCTTCTCAGACCACATGGACAATGGATCTGTGCCTCTGGGGGAACCGCTCATGGACACTGCTGTGGAAGTGAGAGATGAGAATGGACGTCTGGTCACTGAAGGAGAGGGACAGGTCTTCAtagGCGGTCAGGAGAGAGTATGCTTACTAGACGGTGAGACGATGACTGCTGCCAAAGGAGTGATGCGTGCTACAGGGGACTGGGTGATGGTGCAGAACTCGCACCTCTATTACTTGGGTAGGAAGGACCGGCTGGTCAAAAGGCATGGTCAGATGCTACACCTGGATGCCTTACAACAGGCCATGGAACGCTTGCCTCAGGTAGAAGCTGGTGTGGTGGGTCTGCATGAGAACAGCAGATTGGTGGCTTTTGTGGTGCCCACAATTGACACAAGAACCGTGTCCTCTGAACACAGTGGCAACCAAGAACAGCATGTGCACAGCTCCACTAAGGACTCAGAAGACTCTCGTGTTTCCTCCAGAGCTCTAGAGATGGAAGTGCTACGAGGACTGTCTCAACTTGTGCCCAATCACAGCATTCCAGATACTGTATTATTGGTCCCTGCCCTGCCACTCACTAATCATGGTAAAGTGGCCATGGAGAAGCTGATGAGGTtgtatgagagacagagagaggttaGCGATAAGCACACCAGAATGGGAGACATGGAGACTGTGAGAGAAAGACTACAGGCACTATGGAAGgagTGTCTAGGTCTTTGTGATGATGGAGTTGTCACAGACGATGCACACTTCATGTTAAGTGGCGGGGATTCTCTACAAGCCCTGCGCCTCTTCGATTACATcactgttactatggaaacggcTTCTGCGGGTCTGCTGGAGGTCATTCTAGATGGCTCTTTTTCAGATGTCCTGAAACACATCACAGCAACCCACCAAAATCCTATCAAGACATCAGGCAAAAGACAAGCTGAAGATTCTGCATCTGTTGTTCCATCTAAGAGGTACCACACAGAAGTTGACTCAAACTTCGACCCTGAGGGGATTTTGCCACCTGTGGTGTCCTCAGAGAGAAGCAATATGAGATTTGTAGTTGTCCGTAGAGCTGGAGGTGTTGTATTTTGggattactttttaaaaagagagCAAAGACTTGTTACAAATTCAACAGGAGCCAGTGACAACATGGACAAGATACAAGAGAATTATCCAAGTGCAGAACcattatttataagcaaaccAAGTCAGCAGTGTAACGCAGGAAGTGGTGTTACTACACAATCAGGCATTACAAAAGACAGCCAACCCCTGGGCCTGCAGGTCTGTTGGAGTTCTGACACGGGCAGATGTGTGGACGCTTCACCAGTGTTGCTGATAGGTCCTGAGCGAGCCACTGTGTTTATTGGCTCTCACTCGCACAGACTGCAGGCTCTGGACCTGAGCAGCGGAGAGGTGGTGTGGGAGCGTGTGCTTGGGGACCGACTGGAATCTTCTGCTGCGGTTTCTAAATGTGGAACCCTGGTGGCATTAGGGTGTTATGATGGGCAGGTGTATTTTCTGAGTGTGGCCTCGGGGGAGACGTGCTGGGTGTTTAAGACAGGAGATGCAGTGAAGAGTTCTCCTGTTGTAGACCCTCAGACTGGACTGGTTATCATCGGTTCCCACGACGGACATGTCTACGCGTTAGAACCACTGgtgaagCGTTGTGTGTGGACATACTATTGTGGAGGTGGTGCGGTGTTTTCTTCCCCCTGTGTCCACTCCTCTCCCAGGCGGCTATACTCAGCCACACTACGAGGGCAGCTCCATTGCCTCAGTCCGgaCAGCGGTAAAGTCTTGTGGACGCATTGCACTGATGTtccatttttctcttctccttcctGTTCCGACTCCTGTGTCTGCATTGGTTCAGTGAATGGACAGATCAGTGCATTAAGCCATGATGGACATATGTTATGGAATTTTCTCACCGATGGACCTGTCTTCTCATCGCCATGCCTGGCCTCATTACCACCTTCAACCAATCAGAGAACCAGAGCTGGAGCATACGATGGTTGCACGACATTATCTCCAGCTTATCAAGCTGTTTTTTGTGGGTCACATGATTGCTCCGTATATTGTATCAATTCTGCTGATGGATCCTTACTATGGCGCTTCCAAACCACAGGCAAGGTGTATTCCAGTCCTTTTGTTTTTGATGGTGCTCCCTGGGGCATAAGAACCCTGGTAGCCGTAGCTTCAACGGATGGAACACTGTGGGTACTTGATGGAGAACAGGGAACACTCAAAGCCTCTTTCTTCTTACCTGGAGAGCTCTTCTCCTCTCCTATCGTGTGGGGTCACACTATAGTCGTGGGATGTCGGAATGACTATGTGTACTGCTTGGAACTGACTAGCAGGAAGGAATAACTAAAGCAACTCTCAGTACAATATGTAAAATGTTCCTACTGGTTAAATGTGTAGATGGCCATGTAACGTATGTAAAACTCTCTAGAATAATAGCAGCACTTTAGCACTATGTACTCGTATTAAATTGTACAGatgttaatatataatttatattatataacatctgtctttaatgtttttttttctacagaattCATAACATTGGTATTATTTAAGAATCTTCTCATGAGTACCTTTTGTAAATGGAAcagaaaaaagtgcaaataccaacaaactgcttttatttcaatGTTACATACAACACTGGTTTGACGCTACACGTTTGCACAcaatcaaattaaaaacaaagcgACGGAACTCAGGGATCTTCAAAGGAACACAGTGCAGTTCAGTCCACGTCTGTACATAAATAcctacatacattacatacatacatacaaaatattacGGTAAGTAGAGGGGGTTGGTGTTTTGCTGGGAGATCAAGGCTTTCTATGAGTTCGAAGCTGTTGTTATTTCAGAGAATAATGTCCTTTCCTCTGCAAAGTCATTATTTAGTCTTCCCCcggcaggattttttttaaagcactgatCTCCCACTGACTTGCTTTTAATGTCTGATACAAGAAGAGCTAGGACAAGCTACAGGATAATAGTGTTTCTATTACAGCAAGCAAGCAGTCTGTGTTCCAGAGAAATATTTCCAAAGAAACTGGAGGGCATAAACACTGTGCAAGAAGCAAATAGTTCATTAAcatttggttaatggtttccagTGAAATGATTTAACATGGTGGTTGAACAGAAGTGTCATTAATAACATTTACTATGTAAGTTATTTACATAAGTAAACACAGTGACTGTCATCATTATGTTAATTTTCAGTGACAGCTTAAATGACAGCAGTCATTTGTCACACAGTGAAAATCTTGGCCAAGATATCAAATAGGTTAATAGTCACAAAGAAAATGAGAATTAACCTTGTCCATATTAGACAAGGGGTGTTAAGACAatttaacaaatacatttttgaaatgTCAGGACTGGAATctagacttaaaaaaaaaaaaatacaaaaacagtagCCAGTTCTGAAGTTCATGCTTGTAATACATATCAGGGGGTGAAGTAGGATGTTTGTTATGGTGACACCTACTGTGCAACTTTAGCCCTTGAGTGAGTTCTTAAAAGACTCCCCAAAGAATTTATCACAAACTGTTAAAGAAGATGTGACTC

Function

symbol description
aasdh Predicted to enable acid-thiol ligase activity. Predicted to be involved in fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process. Orthologous to human AASDH (aminoadipate-semialdehyde dehydrogenase).

NR:

description
acyl-CoA synthetase family member 4

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0016878 acid-thiol ligase activity molecular_function

KEGG:

id description
K00142 AASDH; acyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026944445.2 True 4816 mRNA 0.46 14 4124058 4137561
XM_026944446.2 False 4133 mRNA 0.45 12 4127301 4137561

Neighbor

gene id symbol gene type direction distance location
ppat ppat,LOC107683925,LOC107721366,LOC107737308,LOC107556156 coding upstream 8603 4101669 ~ 4115455 (+)
hook1 hook1 coding upstream 78785 4024682 ~ 4045273 (+)
pfas pfas,LOC107665308,LOC107556148,LOC107593806,LOC107737373,LOC107737297 coding upstream 107508 3991667 ~ 4016550 (+)
LOC113546823 LOC108257899 coding upstream 206978 3905694 ~ 3917080 (+)
mgst3a mgst3 coding upstream 222192 3897015 ~ 3901866 (+)
cep135 cep135 coding downstream 38970 4176531 ~ 4196440 (+)
nmu NA coding downstream 98266 4235827 ~ 4238921 (+)
trnad-guc_16 NA coding downstream 189910 4327471 ~ 4327542 (+)
trnad-guc_18 NA coding downstream 195997 4333558 ~ 4333629 (+)
trnad-guc_19 NA coding downstream 200342 4337903 ~ 4337974 (+)
G289530 LOC108257764 non-coding upstream 50092 4061818 ~ 4073966 (+)
G289532 NA non-coding upstream 57633 4060744 ~ 4066425 (+)
G289533 NA non-coding upstream 68073 4047209 ~ 4055985 (+)
G289515 NA non-coding upstream 150043 3942274 ~ 3974015 (+)
G289517 NA non-coding upstream 175600 3948196 ~ 3948458 (+)
LOC117599777 NA non-coding downstream 101465 4239026 ~ 4243951 (+)
G289615 NA non-coding downstream 127822 4265383 ~ 4334959 (+)
G289619 NA non-coding downstream 181900 4319461 ~ 4330272 (+)
G289521 NA non-coding downstream 208018 4345579 ~ 4363088 (+)
LOC117599675 LOC107732010 non-coding downstream 213187 4350748 ~ 4352801 (+)
G289531 NA other upstream 53691 4054457 ~ 4070367 (+)
trnad-guc_14 NA other upstream 135935 3988052 ~ 3988123 (+)
ipo13 ipo13,LOC107697216,LOC107745904,LOC107593276,LOC107691006,LOC106613950 other upstream 141364 3943494 ~ 3982694 (+)
cnstb LOC108257742 other upstream 1628006 2485036 ~ 2496052 (+)
LOC113546780 NA other upstream 1981877 2133158 ~ 2142181 (+)
clocka clock,LOC107701480 other downstream 110769 4248330 ~ 4309929 (+)
trnad-guc_17 NA other downstream 191271 4328832 ~ 4338299 (+)
LOC113545190 NA other downstream 463494 4601055 ~ 4609601 (+)
dnm3a dnm3,dnm3a other downstream 804390 4941951 ~ 4979400 (+)
usp24 usp24 other downstream 1597912 5735473 ~ 5801693 (+)

Expression


Co-expression Network