mylk4b (mylk4,LOC108257896,LOC101163967,LOC103463388)


Basic Information

Item Value
gene id mylk4b
gene name mylk4,LOC108257896,LOC101163967,LOC103463388
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 9917365 ~ 9941395 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026944627.2
tgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtttgcatttggaTGTGTGAATTTAAGTGCAAATGTGCAAGTGAGAGGAATGACTGAGCACATTAAGTGCTGCGTCTAATGTTAAAGGATACACTGGGTCCTCTTCACCACCTTGCGTTTCCTCAGAGCCAGAGTTCCACCTGTCTGACACTTGTCTCTGTGACTGACACATTCTCTGCTCCTTATAGAGAGGAGGCATGAGGGTGGGTTCACTTCTGTCTCCCTTTCAGAATCTGTGGCTTGGCTGCACCGTTGATGTCAACAACCAGACTACTGTTAACGTAGAGCTGAAAAAGTGGGAGATAGGGACACATAGGGGATTAAAAGTGTCATTAAAGTGGAGTTTGTGCACAGACGGAGGCTCGGACTTGGGCCCCATGTTTGTGACTTTGGTTACCATGGAGAACTTCTTGCGTGATAAGGACGTTTGGATTGTGGGTAGTGTGTGCTTAGTTGTATCCATTTTATGGAGGAAGTTTTGGAGTTTATTCACCCACAAGAGGAAACAAGATAAATCAGCAGGAAGCACATCACTTTActcacagCTGAAAGAGAAGGAATGTAAGGAGAAGCCAAATGTGTGCTTAAAGGTGTCGAAATCCCAGAAGAAGAAACCTCCAGATGCAACAGgTGCAGCCAAGGATGACTTGGAAAAGGTACAAATGCTCAATCAACAGAACACAAGCCTTTTCCATGGCAATGCTGAAACCGATGCTAGCACAACAGGACTTCTGGACTTTATCCAAGATGAGAAAGAAGCACAAACtgagaaaaaagataaagaagaaCTGCAAACAGGGGAGAAAAAAGAGGACAGTACGGAAGATAAAGATATTCTCATACAATCCAGGTTGAATGAGAAAGTAGAGACAAACAACGAGGAAGAGAATCAGAGAATAGAAAAAGAAGATGGCTTGAGTGTCCCTGAGGTGCCGTCTTTAATCCTGTCTAGCTGTGAGTTTAGTCAAGACCAGGAAGTCCCCCAGGAAAGcGATAATGAACACATAGAGTTGATTGCCAGTACTAAGAGACGAGTCGAGAATCTGGAGAAAGATGATCTCAAAAAAAGCAGAGTGGAGGAAAGGTCAGAAGAGGTGGAAAAAagtgaggaagaaaagaagccTGGAGTGGGAGCATCAGAGGTGGAACCAAAGAAACctgaggaggagaggaaagaagTAGATTCAGTGCCTGAAGAATATATCATAGATTgctcacctcctcctccagcaCCCTTTGAGCACCGTGTGGTGACAACCAAAACCCAACATATAGCTACCTATTATACCATCAACAGAGAGGAAGTGCTTGGAGGTGGGCGCTTTGGAATTGTCCATAAGTGTGTGGAGAATTCTTCTGGTCTCACACTGGCAGCTAAGATCATCAAAACCAGGAATCAGAAGGAGAAGGAAGTGGTAAAAAGTGAGATTGAGGTTATGAACCAGCTGAACCATGCTAGCCTCATCCAGCTTTATGCTGCTTATGAGTCTCGCAATGATATCACTCTCGTCATGGAGTATGTCGAGGGAGGAGAATTATTTGATCGCATCATCGATGAGAATTACAATTTGACTGAATTGGACACAGTGCTGTTAATCAGACAGATAACAGAAGGGCTACAATACATGCACAAGATGTACATACTGCACCTCGACCTGAAGccagaaaatatactgtgtgtgagtcgagaaacaaataaaatcaagatCATTGACTTTGGTCTGGCCAGAAGATATAAACCAAGGGAGAAGCTCAGAGTGAATTTTGGCACACCTGAGTTCCTTGCACCTGAGGTGATCAACTATGAGTTTGTCTCCTTCCCAACAGATATGTGGAGCTTAGGAGTCATTACATACATGCTGCTAAGCGGTCTCTCTCCTTTCCTGGGTGATGATGACAATGAGACACTGAATAACATCCTAGAATGTAAGTGGAACTTTGAAGAGGCAGAGTTTGCCGATATCTCTGATGAAGCCAAAGACTTCATAACACGTCTGCTCATTAAGAGCAAgagTTGGCGAATGAGTGCATCTCAGTCACTGAAACATCCCTGGCTGTCTGATCAAACACTTCACTATCGTCTGCATCAGAAAAGGAACAAGTGCCACTCCACAAACGCTCCTCCACCAGAGAGCTAAAACAGaaaTCTTCTTCACCCATGTGAAGAACTGGACCAACAAAACTGCACCTGAATGGCCACCAGCTGCTATACAACAATGAATATCCATTTCATAACCAGTAAAAGTAGGCTACAACACAATACTAATTCTTCTTTGTAACAATACCTGAACAACAGGAGGTAGCTTTACAGTCCTCCACTTGCAATGCACAACTCTACTGTTATACATAATTCATCTTTTACTAATCAAGTCTTATTTCTGTgtcactgtttttgttgtttgatATTTATACTGacataaaaatgattaatttttgtttttaaatatatcattatataacaATGTACTGTAGACTTGATATGCTTGAATACATGATATACATGATTACTTTCACTCCATGGCACAAATCCAGCAACCACCTCAAGTTTCTTGTTTCTATATGGGAAAAACATGGCTTTTGGATAATATTGTTAGCAGTtacaaaatgtatgtaatataaaacaCTTAATTTAGAAATTTAGAGGTATTTCATCAACAAGAACAACCAGTTACACAGTTCTCCACTTGTATGTACCCGAAAGTAGCTGATAGGCCAAGATATGTTTGGGGTGTAAAATTAGCTTCTTTCATTTTacactgaagattttttttttcaacttacttttttttttattgtgcaaTGCTttcttacaaagcatgtacactGTTCACATAAGGTACATAACATTACACTGAAGATTAAAGTAGCTACATGctgtaataatacaaatattgaATTAAAGTGGAAAGTTGGTGGCTATTGTTATGTACAGTTCAAGATGACACAGTTAAATTTGCACTGACAGACTACTTCTGCTATATAACAGAAACATTTGCTTTTGAATGccattatttgttagctacaaTTGCCTccagtgtaaaataaaagaaaggtaACTTTACACCCAAAAATGTTTATAGATTAGAACTATACTGTCATACTGTTTTCTCAACCACATTGAGAAGTCCATGTGACATTACTGAATAACTAGAAGCAGTTTAAGGCAGAGGTGTACAAGAAGGATGGGTTAGAGATTACTTGCCAGCTAATTTAGActtgtagctccagtacaaaactaaacaaGCACATGACTTGGCTGAACAACCACATACAGTTGGGGTCAcaagtttacatatgccttgcagaatctgtaaaatgttaattttttttaacaaaataagagggatcatacacattgcagtttgttttttatttagtgctgccctgaataagctatttcacacacaactattacaaaaggtggaACTGActctcaagaaggcaacacgatacattaagagccgaGGGGGTGTAAAGTTTTgaatatgatgatgataaattgttattattttatcttctgggaaacatgtaaatatcttatgtagcttctgaa
>XM_026944628.2
TGTATGGTCACTCTAATACTCACCTCTGAGACTGTTCAGACTgagaacaacacacactttGACTTAGCATCCACTGCTGAGAGAAGAAcagggaagggaaaaaaaggtgGAATCCAAATGAAAAAGGTGTTGaaggagatgggaggaaaagagaagaagatTTTAAACATTGCTAAATATCAAGCCTTGGACATGTCTGCTACAGAAAGCAAGCACAGCAAATGTGGTCTCTCTGATGCAGTGAGCTCACCTCTGCCACATCCTGCATATCTGAGCAGCCATGTCCCTGTGGATGGGGAAGGTGAGAGGTCAGCCATTGGTCGCATGGATTTCTTCCGACACCTGGAAAGGGTGGAAACTCTACGCTGCTACTGGGAGCTCAAACATGTGCAGCCGGGGGGTCTGGGGCAGCTGAAAGAGAAGGAATGTAAGGAGAAGCCAAATGTGTGCTTAAAGGTGTCGAAATCCCAGAAGAAGAAACCTCCAGATGCAACAGgTGCAGCCAAGGATGACTTGGAAAAGGTACAAATGCTCAATCAACAGAACACAAGCCTTTTCCATGGCAATGCTGAAACCGATGCTAGCACAACAGGACTTCTGGACTTTATCCAAGATGAGAAAGAAGCACAAACtgagaaaaaagataaagaagaaCTGCAAACAGGGGAGAAAAAAGAGGACAGTACGGAAGATAAAGATATTCTCATACAATCCAGGTTGAATGAGAAAGTAGAGACAAACAACGAGGAAGAGAATCAGAGAATAGAAAAAGAAGATGGCTTGAGTGTCCCTGAGGTGCCGTCTTTAATCCTGTCTAGCTGTGAGTTTAGTCAAGACCAGGAAGTCCCCCAGGAAAGcGATAATGAACACATAGAGTTGATTGCCAGTACTAAGAGACGAGTCGAGAATCTGGAGAAAGATGATCTCAAAAAAAGCAGAGTGGAGGAAAGGTCAGAAGAGGTGGAAAAAagtgaggaagaaaagaagccTGGAGTGGGAGCATCAGAGGTGGAACCAAAGAAACctgaggaggagaggaaagaagTAGATTCAGTGCCTGAAGAATATATCATAGATTgctcacctcctcctccagcaCCCTTTGAGCACCGTGTGGTGACAACCAAAACCCAACATATAGCTACCTATTATACCATCAACAGAGAGGAAGTGCTTGGAGGTGGGCGCTTTGGAATTGTCCATAAGTGTGTGGAGAATTCTTCTGGTCTCACACTGGCAGCTAAGATCATCAAAACCAGGAATCAGAAGGAGAAGGAAGTGGTAAAAAGTGAGATTGAGGTTATGAACCAGCTGAACCATGCTAGCCTCATCCAGCTTTATGCTGCTTATGAGTCTCGCAATGATATCACTCTCGTCATGGAGTATGTCGAGGGAGGAGAATTATTTGATCGCATCATCGATGAGAATTACAATTTGACTGAATTGGACACAGTGCTGTTAATCAGACAGATAACAGAAGGGCTACAATACATGCACAAGATGTACATACTGCACCTCGACCTGAAGccagaaaatatactgtgtgtgagtcgagaaacaaataaaatcaagatCATTGACTTTGGTCTGGCCAGAAGATATAAACCAAGGGAGAAGCTCAGAGTGAATTTTGGCACACCTGAGTTCCTTGCACCTGAGGTGATCAACTATGAGTTTGTCTCCTTCCCAACAGATATGTGGAGCTTAGGAGTCATTACATACATGCTGCTAAGCGGTCTCTCTCCTTTCCTGGGTGATGATGACAATGAGACACTGAATAACATCCTAGAATGTAAGTGGAACTTTGAAGAGGCAGAGTTTGCCGATATCTCTGATGAAGCCAAAGACTTCATAACACGTCTGCTCATTAAGAGCAAgagTTGGCGAATGAGTGCATCTCAGTCACTGAAACATCCCTGGCTGTCTGATCAAACACTTCACTATCGTCTGCATCAGAAAAGGAACAAGTGCCACTCCACAAACGCTCCTCCACCAGAGAGCTAAAACAGaaaTCTTCTTCACCCATGTGAAGAACTGGACCAACAAAACTGCACCTGAATGGCCACCAGCTGCTATACAACAATGAATATCCATTTCATAACCAGTAAAAGTAGGCTACAACACAATACTAATTCTTCTTTGTAACAATACCTGAACAACAGGAGGTAGCTTTACAGTCCTCCACTTGCAATGCACAACTCTACTGTTATACATAATTCATCTTTTACTAATCAAGTCTTATTTCTGTgtcactgtttttgttgtttgatATTTATACTGacataaaaatgattaatttttgtttttaaatatatcattatataacaATGTACTGTAGACTTGATATGCTTGAATACATGATATACATGATTACTTTCACTCCATGGCACAAATCCAGCAACCACCTCAAGTTTCTTGTTTCTATATGGGAAAAACATGGCTTTTGGATAATATTGTTAGCAGTtacaaaatgtatgtaatataaaacaCTTAATTTAGAAATTTAGAGGTATTTCATCAACAAGAACAACCAGTTACACAGTTCTCCACTTGTATGTACCCGAAAGTAGCTGATAGGCCAAGATATGTTTGGGGTGTAAAATTAGCTTCTTTCATTTTacactgaagattttttttttcaacttacttttttttttattgtgcaaTGCTttcttacaaagcatgtacactGTTCACATAAGGTACATAACATTACACTGAAGATTAAAGTAGCTACATGctgtaataatacaaatattgaATTAAAGTGGAAAGTTGGTGGCTATTGTTATGTACAGTTCAAGATGACACAGTTAAATTTGCACTGACAGACTACTTCTGCTATATAACAGAAACATTTGCTTTTGAATGccattatttgttagctacaaTTGCCTccagtgtaaaataaaagaaaggtaACTTTACACCCAAAAATGTTTATAGATTAGAACTATACTGTCATACTGTTTTCTCAACCACATTGAGAAGTCCATGTGACATTACTGAATAACTAGAAGCAGTTTAAGGCAGAGGTGTACAAGAAGGATGGGTTAGAGATTACTTGCCAGCTAATTTAGActtgtagctccagtacaaaactaaacaaGCACATGACTTGGCTGAACAACCACATACAGTTGGGGTCAcaagtttacatatgccttgcagaatctgtaaaatgttaattttttttaacaaaataagagggatcatacacattgcagtttgttttttatttagtgctgccctgaataagctatttcacacacaactattacaaaaggtggaACTGActctcaagaaggcaacacgatacattaagagccgaGGGGGTGTAAAGTTTTgaatatgatgatgataaattgttattattttatcttctgggaaacatgtaaatatcttatgtagcttctgaa
>XM_034313885.1
TGTATGGTCACTCTAATACTCACCTCTGAGACTGTTCAGACTgagaacaacacacactttGACTTAGCATCCACTGCTGAGAGAAGAAcagggaagggaaaaaaaggtgGAATCCAAATGAAAAAGGTGTTGaaggagatgggaggaaaagagaagaagatTTTAAACATTGCTAAATATCAAGCCTTGGACATGTCTGCTACAGAAAGCAAGCACAGCAAATGTGGTCTCTCTGATGCAGTGAGCTCACCTCTGCCACATCCTGCATATCTGAGCAGCCATGTCCCTGTGGATGGGGAAGGTGAGAGGTCAGCCATTGGTCGCATGGATTTCTTCCGACACCTGGAAAGGGTGGAAACTCTACGCTGCTACTGGGAGCTCAAACATGTGCAGCCGGGGGGTCTGGGGCAGCTGAAAGAGAAGGAATGTAAGGAGAAGCCAAATGTGTGCTTAAAGGTGTCGAAATCCCAGAAGAAGAAACCTCCAGATGCAACAGgTGCAGCCAAGGATGACTTGGAAAAGGTACAAATGCTCAATCAACAGAACACAAGCCTTTTCCATGGCAATGCTGAAACCGATGCTAGCACAACAGGACTTCTGGACTTTATCCAAGATGAGAAAGAAGCACAAACtgagaaaaaagataaagaagaaCTGCAAACAGGGGAGAAAAAAGAGGACAGTACGGAAGATAAAGATATTCTCATACAATCCAGGTTGAATGAGAAAGTAGAGACAAACAACGAGGAAGAGAATCAGAGAATAGAAAAAGAAGATGGCTTGAGTGTCCCTGAGGTGCCGTCTTTAATCCTGTCTAGCTGTGAGTTTAGTCAAGACCAGGAAGTCCCCCAGGAAAGcGATAATGAACACATAGAGTTGATTGCCAGTACTAAGAGACGAGTCGAGAATCTGGAGAAAGATGATCTCAAAAAAAGCAGAGTGGAGGAAAGGTCAGAAGAGGTGGAAAAAagtgaggaagaaaagaagccTGGAGTGGGAGCATCAGAGGTGGAACCAAAGAAACctgaggaggagaggaaagaagTAGATTCAGTGCCTGAAGAATATATCATAGATTgctcacctcctcctccagcaCCCTTTGAGCACCGTGTGGTGACAACCAAAACCCAACATATAGCTACCTATTATACCATCAACAGAGAGGAAGTGCTTGGAGGTGGGCGCTTTGGAATTGTCCATAAGTGTGTGGAGAATTCTTCTGGTCTCACACTGGCAGCTAAGATCATCAAAACCAGGAATCAGAAGGAGAAGGAAGTGGTAAAAAGTGAGATTGAGGTTATGAACCAGCTGAACCATGCTAGCCTCATCCAGCTTTATGCTGCTTATGAGTCTCGCAATGATATCACTCTCGTCATGGAGTATGTCGAGGGAGGAGAATTATTTGATCGCATCATCGATGAGAATTACAATTTGACTGAATTGGACACAGTGCTGTTAATCAGACAGATAACAGAAGGGCTACAATACATGCACAAGATGTACATACTGCACCTCGACCTGAAGccagaaaatatactgtgtgtgagtcgagaaacaaataaaatcaagatCATTGACTTTGGTCTGGCCAGAAGATATAAACCAAGGGAGAAGCTCAGAGTGAATTTTGGCACACCTGAGTTCCTTGCACCTGAGGTGATCAACTATGAGTTTGTCTCCTTCCCAACAGATATGTGGAGCTTAGGAGTCATTACATACATGCTGTTTATAAGAGCTTTGCATATCTGCTATTAAGCATATGACAGCTTTGCAAGAGCCCACAAGTCACCAATGACATGCTGTTG

Function

symbol description
mylk4 Predicted to enable myosin light chain kinase activity. Predicted to be involved in protein phosphorylation. Predicted to be integral component of membrane.

NR:

description
myosin light chain kinase family member 4-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K00907 MYLK; myosin-light-chain kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026944627.2 True 3586 mRNA 0.40 14 9924503 9941395
XM_026944628.2 False 3419 mRNA 0.40 15 9917365 9941395
XM_034313885.1 False 1808 mRNA 0.44 12 9917365 9937952

Neighbor

gene id symbol gene type direction distance location
ypel5 ypel5,slc30a10,LOC107568027,LOC102210471,LOC102788175,LOC108441457,LOC103458748 coding upstream 244837 9667681 ~ 9672528 (+)
faua fau,LOC108411505,LOC105017549 coding upstream 286256 9627578 ~ 9631109 (+)
prpf39 prpf39 coding upstream 291255 9618830 ~ 9626110 (+)
LOC113545275 LOC108257654 coding upstream 339807 9574351 ~ 9577558 (+)
LOC113545265 c25h14orf37,LOC107717645,LOC107659812,LOC107574488,LOC107713862 coding upstream 365424 9542408 ~ 9551941 (+)
gmds gmds,LOC107711642 coding downstream 4395 9945790 ~ 10025924 (+)
exoc2 exoc2,LOC107721345,LOC107711641,LOC107665386,LOC107659211 coding downstream 149974 10091369 ~ 10121300 (+)
LOC113545207 LOC108257895 coding downstream 195594 10136989 ~ 10140336 (+)
LOC117599727 LOC108261516,LOC108257915 coding downstream 229397 10170792 ~ 10186791 (+)
katnbl1 katnbl1 coding downstream 424773 10366168 ~ 10374001 (+)
G292929 NA non-coding upstream 48756 9868149 ~ 9868609 (+)
G292754 arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149,LOC101063995 non-coding upstream 300774 9613425 ~ 9616591 (+)
G292756 NA non-coding upstream 304753 9611988 ~ 9612612 (+)
G292771 NA non-coding upstream 329462 9587700 ~ 9587903 (+)
G292765 NA non-coding upstream 362558 9554437 ~ 9554807 (+)
G293095 LOC108257535,LOC107682698 non-coding downstream 95056 10036451 ~ 10038355 (+)
G293110 NA non-coding downstream 122370 10063765 ~ 10064011 (+)
LOC117599717 NA non-coding downstream 257454 10198849 ~ 10210998 (+)
G293350 NA non-coding downstream 595569 10536964 ~ 10537640 (+)
G293345 NA non-coding downstream 610846 10552241 ~ 10553007 (+)
LOC113545247 plcb1,LOC108258091 other upstream 738192 9074028 ~ 9179173 (+)
G292216 trmt6 other upstream 920369 8993513 ~ 8996996 (+)
LOC113545369 NA other upstream 1382865 8488647 ~ 8534500 (+)
nudt14 nudt14,LOC107718404,LOC107683965 other upstream 1842921 8043386 ~ 8074444 (+)
atp5mpl NA other upstream 2135357 7777597 ~ 7782008 (+)
LOC117599798 NA other downstream 217560 10158955 ~ 10170739 (+)
LOC117599733 NA other downstream 739915 10681310 ~ 10682664 (+)
G293528 NA other downstream 1077011 11018406 ~ 11024973 (+)
pak6b pak6,LOC108257961,LOC108411385 other downstream 1620027 11561422 ~ 11579249 (+)
rps29 NA other downstream 1782586 11723981 ~ 11725332 (+)

Expression


Co-expression Network