Item | Value |
---|---|
gene id | dab1a |
gene name | dab1,dab1a,LOC107581465 |
gene type | coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047613.1 |
NCBI id | CM018559.1 |
chromosome length | 22090854 |
location | 5327165 ~ 5502404 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
symbol | description |
---|---|
dab1a | Predicted to be involved in lateral motor column neuron migration and ventral spinal cord development. Predicted to be active in cytoplasm. Is expressed in several structures, including brain; immature eye; pronephric duct; retina; and spinal cord interneuron. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 37. Orthologous to human DAB1 (DAB adaptor protein 1). |
dab1 | Predicted to enable phosphatidylinositol 3-kinase binding activity. Predicted to be involved in lateral motor column neuron migration and ventral spinal cord development. Predicted to act upstream of or within several processes, including adult walking behavior; negative regulation of receptor signaling pathway via JAK-STAT; and nervous system development. Located in intracellular membrane-bounded organelle. Implicated in spinocerebellar ataxia type 37. Biomarker of autistic disorder. |
description |
---|
PREDICTED: disabled homolog 1 isoform X1 |
id | description |
---|---|
K20054 | DAB1; disabled homolog 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_026944630.2 | True | 4038 | mRNA | 0.49 | 17 | 5342327 | 5502404 |
XM_026944631.2 | False | 3998 | mRNA | 0.49 | 17 | 5344065 | 5502404 |
XM_026944632.2 | False | 3880 | mRNA | 0.49 | 16 | 5344065 | 5502404 |
XM_026944633.2 | False | 3948 | mRNA | 0.50 | 16 | 5342327 | 5502404 |
XM_026944634.2 | False | 3654 | mRNA | 0.49 | 15 | 5409932 | 5502404 |
XM_026944635.2 | False | 3857 | mRNA | 0.50 | 15 | 5342327 | 5502404 |
XM_026944636.2 | False | 3857 | mRNA | 0.50 | 15 | 5342327 | 5502404 |
XM_026944637.2 | False | 3845 | mRNA | 0.49 | 15 | 5342327 | 5502404 |
XM_026944638.2 | False | 3885 | mRNA | 0.50 | 15 | 5342327 | 5502404 |
XM_026944639.2 | False | 3818 | mRNA | 0.49 | 14 | 5342327 | 5502404 |
XM_026944640.2 | False | 3764 | mRNA | 0.49 | 13 | 5342327 | 5502404 |
XM_026944641.2 | False | 3740 | mRNA | 0.49 | 13 | 5342327 | 5502404 |
XM_026944642.2 | False | 3701 | mRNA | 0.49 | 12 | 5342327 | 5502404 |
XM_034313586.1 | False | 3920 | mRNA | 0.50 | 16 | 5342327 | 5502404 |
XM_034313587.1 | False | 3806 | mRNA | 0.49 | 16 | 5327165 | 5502404 |
XM_034313588.1 | False | 3924 | mRNA | 0.49 | 17 | 5327165 | 5502404 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
oma1 | oma1 | coding | upstream | 229688 | 5079221 ~ 5097477 (+) |
mysm1 | mysm1 | coding | upstream | 249247 | 5066310 ~ 5077918 (+) |
scrn2 | scrn2,LOC107697287,LOC107581469,LOC107733816 | coding | upstream | 263016 | 5052030 ~ 5064149 (+) |
suco | suco,LOC107712873,LOC107687343 | coding | upstream | 278723 | 4998148 ~ 5048442 (+) |
mettl13 | mettl13,LOC107733805,LOC107712871 | coding | upstream | 387654 | 4932489 ~ 4939511 (+) |
LOC113545193 | NA | coding | downstream | 3435 | 5505839 ~ 5520633 (+) |
plpp3 | plpp3,LOC107716555,LOC107712879,LOC107697342,LOC107657212 | coding | downstream | 40552 | 5542956 ~ 5575570 (+) |
dhcr24 | dhcr24,LOC107581458,LOC107687183,LOC107566150 | coding | downstream | 341629 | 5844033 ~ 5856556 (+) |
si:ch211-121a2.4 | si:ch211-121a2.4,LOC108257924,LOC103033168,LOC108416079,LOC107581514,LOC107716560,LOC107566151,LOC107687197,LOC107712847 | coding | downstream | 361187 | 5863591 ~ 5868013 (+) |
sirt5 | sirt5,LOC107687181,LOC107712885 | coding | downstream | 372784 | 5875188 ~ 5887559 (+) |
LOC113545370 | NA | non-coding | upstream | 20263 | 5302630 ~ 5306902 (+) |
G290192 | NA | non-coding | upstream | 73442 | 5253517 ~ 5253723 (+) |
LOC117599804 | NA | non-coding | upstream | 176240 | 5147185 ~ 5150925 (+) |
G290030 | NA | non-coding | upstream | 419353 | 4898967 ~ 4907812 (+) |
G290028 | NA | non-coding | upstream | 430778 | 4896122 ~ 4896387 (+) |
G290417 | NA | non-coding | downstream | 41714 | 5544118 ~ 5599007 (+) |
LOC117599803 | NA | non-coding | downstream | 77414 | 5579818 ~ 5588495 (+) |
G290419 | NA | non-coding | downstream | 144973 | 5647377 ~ 5655687 (+) |
G290562 | NA | non-coding | downstream | 230327 | 5732731 ~ 5734300 (+) |
G290566 | NA | non-coding | downstream | 299394 | 5801798 ~ 5804340 (+) |
dnm3a | dnm3,dnm3a | other | upstream | 347765 | 4941951 ~ 4979400 (+) |
LOC113545190 | NA | other | upstream | 717564 | 4601055 ~ 4609601 (+) |
trnad-guc_17 | NA | other | upstream | 988866 | 4328832 ~ 4338299 (+) |
clocka | clock,LOC107701480 | other | upstream | 1017236 | 4248330 ~ 4309929 (+) |
G289531 | NA | other | upstream | 1256798 | 4054457 ~ 4070367 (+) |
usp24 | usp24 | other | downstream | 233069 | 5735473 ~ 5801693 (+) |
b4galt6 | b4galt6,LOC107712262,LOC107687169,LOC107712895 | other | downstream | 633516 | 6135920 ~ 6160040 (+) |
tdh | tdh,LOC107561940,LOC103024478,LOC108435012,LOC107723287 | other | downstream | 1510338 | 7012742 ~ 7019686 (+) |
atp5mpl | NA | other | downstream | 2275193 | 7777597 ~ 7782008 (+) |
nudt14 | nudt14,LOC107718404,LOC107683965 | other | downstream | 2540982 | 8043386 ~ 8074444 (+) |