Item | Value |
---|---|
gene id | dnm3a |
gene name | dnm3,dnm3a |
gene type | misc |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047613.1 |
NCBI id | CM018559.1 |
chromosome length | 22090854 |
location | 4941951 ~ 4979400 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
symbol | description |
---|---|
dnm3a | Predicted to enable GTPase activity and microtubule binding activity. Predicted to be involved in receptor internalization and synaptic vesicle endocytosis. Predicted to act upstream of or within endocytosis. Predicted to be located in cytoskeleton. Predicted to be active in several cellular components, including microtubule; plasma membrane; and synapse. Is expressed in heart; liver; muscle; nervous system; and neural tube. Orthologous to human DNM3 (dynamin 3). |
dnm3 | Enables identical protein binding activity. Predicted to be involved in endocytosis; filopodium assembly; and synapse assembly. Located in extracellular exosome. |
description |
---|
PREDICTED: dynamin-3 isoform X1 |
id | name | namespace |
---|---|---|
GO:0006897 | endocytosis | biological_process |
GO:0005874 | microtubule | cellular_component |
GO:0003924 | GTPase activity | molecular_function |
GO:0005525 | GTP binding | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_026944665.2 | False | 3394 | mRNA | 0.49 | 22 | 4941953 | 4979400 |
XM_026944669.2 | True | 3708 | mRNA | 0.48 | 22 | 4941952 | 4976352 |
XM_034313593.1 | False | 3462 | mRNA | 0.49 | 23 | 4941951 | 4979400 |
XM_034313594.1 | False | 3459 | mRNA | 0.49 | 23 | 4941951 | 4979400 |
XM_034313595.1 | False | 3432 | mRNA | 0.49 | 22 | 4941951 | 4979400 |
XM_034313596.1 | False | 3669 | mRNA | 0.49 | 23 | 4941951 | 4979400 |
XM_034313597.1 | False | 3602 | mRNA | 0.49 | 22 | 4941952 | 4979400 |
XM_034313598.1 | False | 3192 | mRNA | 0.49 | 21 | 4941951 | 4979400 |
XR_004580098.1 | False | 3532 | misc_RNA | 0.49 | 24 | 4941951 | 4979400 |
XR_004580099.1 | False | 3465 | misc_RNA | 0.49 | 23 | 4941952 | 4979400 |
XR_004580100.1 | False | 2705 | misc_RNA | 0.51 | 21 | 4941951 | 4974061 |
XR_004580101.1 | False | 2657 | misc_RNA | 0.50 | 21 | 4941951 | 4978855 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
mettl13 | mettl13,LOC107733805,LOC107712871 | coding | upstream | 2440 | 4932489 ~ 4939511 (+) |
prrc2c | prrc2c,LOC107712868 | coding | upstream | 55450 | 4859323 ~ 4886501 (+) |
LOC113545311 | LOC108257966,LOC108415675 | coding | upstream | 87226 | 4847581 ~ 4854725 (+) |
LOC117599802 | LOC108257967 | coding | upstream | 95917 | 4835086 ~ 4846034 (+) |
LOC113545285 | LOC108257967 | coding | upstream | 110007 | 4823038 ~ 4831944 (+) |
suco | suco,LOC107712873,LOC107687343 | coding | downstream | 18748 | 4998148 ~ 5048442 (+) |
scrn2 | scrn2,LOC107697287,LOC107581469,LOC107733816 | coding | downstream | 72630 | 5052030 ~ 5064149 (+) |
mysm1 | mysm1 | coding | downstream | 86910 | 5066310 ~ 5077918 (+) |
oma1 | oma1 | coding | downstream | 99821 | 5079221 ~ 5097477 (+) |
dab1a | dab1,dab1a,LOC107581465 | coding | downstream | 347765 | 5327165 ~ 5502404 (+) |
G290030 | NA | non-coding | upstream | 34139 | 4898967 ~ 4907812 (+) |
G290028 | NA | non-coding | upstream | 45564 | 4896122 ~ 4896387 (+) |
G290009 | NA | non-coding | upstream | 127155 | 4808540 ~ 4814796 (+) |
G290005 | NA | non-coding | upstream | 135371 | 4804560 ~ 4806580 (+) |
G290004 | NA | non-coding | upstream | 138923 | 4802813 ~ 4803028 (+) |
LOC117599804 | NA | non-coding | downstream | 167785 | 5147185 ~ 5150925 (+) |
G290192 | NA | non-coding | downstream | 274117 | 5253517 ~ 5253723 (+) |
LOC113545370 | NA | non-coding | downstream | 323230 | 5302630 ~ 5306902 (+) |
G290417 | NA | non-coding | downstream | 564718 | 5544118 ~ 5599007 (+) |
LOC117599803 | NA | non-coding | downstream | 600418 | 5579818 ~ 5588495 (+) |
LOC113545190 | NA | other | upstream | 332350 | 4601055 ~ 4609601 (+) |
trnad-guc_17 | NA | other | upstream | 603652 | 4328832 ~ 4338299 (+) |
clocka | clock,LOC107701480 | other | upstream | 632022 | 4248330 ~ 4309929 (+) |
G289531 | NA | other | upstream | 871584 | 4054457 ~ 4070367 (+) |
trnad-guc_14 | NA | other | upstream | 953828 | 3988052 ~ 3988123 (+) |
usp24 | usp24 | other | downstream | 756073 | 5735473 ~ 5801693 (+) |
b4galt6 | b4galt6,LOC107712262,LOC107687169,LOC107712895 | other | downstream | 1156520 | 6135920 ~ 6160040 (+) |
tdh | tdh,LOC107561940,LOC103024478,LOC108435012,LOC107723287 | other | downstream | 2033342 | 7012742 ~ 7019686 (+) |
atp5mpl | NA | other | downstream | 2798197 | 7777597 ~ 7782008 (+) |
nudt14 | nudt14,LOC107718404,LOC107683965 | other | downstream | 3063986 | 8043386 ~ 8074444 (+) |