ociad2


Basic Information

Item Value
gene id ociad2
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 3258173 ~ 3262050 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026946830.2
ACTGATCCAGTGGTTTGCTTGTGGGAAGGGCCTACTGAATGtttacacagagagacagaggagcaGAAGTATTTTTCTTAGTCGGGCTCAAAAGGCTCAATCTCAAACACATTTTAGAAAAGGAAGAACGAGCAAGGCAAAAGAGTTCTGAGTGGCCAGGACAAATATGACAACTGAAACAACAGAGAATGCAGGAGGAGTGCAACCAGGCACAAAAAAAGCCTGGTGTCCCATGGGGGACAAACATTTTCACAGCGATGAGGTGAAGCAGATCTGGAAGGAGTGCCAAGAGGAGAGTTTTTGGTACAGAGCTCTTCCGCTCTCTCTTGGAAGCATGGCTATCACTGGTGGCCTAATCTACAATGGGGTTTGGAAACAATCAAAGCGCTTTGGTCCATTCCCTAAACTGGCACTGGCAGGTATCATTGGTTACGCAGTGGGAAAAGCTTCTTACATGGGAACATGTAGAGAAAAGTTTCAAAAGCTGGGCCCAGACTTCGGCAAAGGCTTTGGCCCAGGCTGGGGTCCAGGGTGTGGGCCTCTTTTCTTTGGAGGCAGTGGACATAGACACTGCACACATGTATGTCAGGAGTGTAAGAAAGTCGAAGAAGCTGGAACAGAGTCTGCAAAACCTACTCAAAGCTGAGGGAATTAAGCGTAAATACACAAATGTACTCAACTACATGATGCCTGCTTCGACTAATACCAGAAGTAATGCAAACACTGGTACAGTGTCATCGGTCATTATCTTATAGAACACATACTTTTGTAGGTTCATTTAtgcattaaaacaattaaaatgaagTATTGtccaaaataa

Function

NR:

description
OCIA domain-containing protein 2-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
ko00071 Fatty acid degradation
ko00380 Tryptophan metabolism
ko00830 Retinol metabolism
ko00980 Metabolism of xenobiotics by cytochrome P450
ko00982 Drug metabolism - cytochrome P450
ko00983 Drug metabolism - other enzymes
ko05204 Chemical carcinogenesis - DNA adducts

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026946830.2 True 820 mRNA 0.45 6 3258173 3262050

Neighbor

gene id symbol gene type direction distance location
zar1 zar1 coding upstream 113439 3142883 ~ 3144734 (+)
slc10a4 slc10a4 coding upstream 116456 3135733 ~ 3141717 (+)
slain2 slain2 coding upstream 130053 3101394 ~ 3128120 (+)
anapc4 anapc4,LOC107683992,LOC107665412 coding upstream 157412 3084649 ~ 3100761 (+)
cbr4 cbr4,LOC107597475,LOC107665353 coding upstream 281928 2967201 ~ 2976245 (+)
dcun1d4 dcun1d4,LOC107755250,LOC107597444 coding downstream 1897 3263947 ~ 3277968 (+)
spata18 spata18,LOC107683994,LOC107718421,LOC107601933 coding downstream 43003 3305053 ~ 3314463 (+)
rasl11b rasl11b coding downstream 137065 3399115 ~ 3402675 (+)
fip1l1a LOC108257999 coding downstream 292687 3554737 ~ 3585005 (+)
gsx2 gsx2 coding downstream 456056 3718106 ~ 3720488 (+)
G288927 NA non-coding upstream 64243 3192107 ~ 3193930 (+)
G288839 NA non-coding upstream 277968 2978333 ~ 2980205 (+)
G288834 NA non-coding upstream 341363 2869596 ~ 2916810 (+)
G288836 NA non-coding upstream 387507 2870362 ~ 2870666 (+)
G288789 NA non-coding upstream 493118 2764270 ~ 2765055 (+)
G289121 NA non-coding downstream 17356 3279406 ~ 3288541 (+)
G289134 NA non-coding downstream 79351 3341401 ~ 3343744 (+)
LOC113546783 NA non-coding downstream 102178 3364228 ~ 3368671 (+)
G289145 NA non-coding downstream 102188 3364238 ~ 3369854 (+)
LOC113546887 NA non-coding downstream 103228 3365278 ~ 3365402 (+)
cnstb LOC108257742 other upstream 762121 2485036 ~ 2496052 (+)
LOC113546780 NA other upstream 1115992 2133158 ~ 2142181 (+)
ptchd4 ptchd4,LOC107732383,LOC107553442,LOC107732542,LOC107601530 other upstream 1236910 1996120 ~ 2021263 (+)
srp9 srp9,LOC107553440,LOC107601484 other upstream 1898057 1358186 ~ 1360116 (+)
LOC117599677 NA other upstream 1993541 1259176 ~ 1264632 (+)
ipo13 ipo13,LOC107697216,LOC107745904,LOC107593276,LOC107691006,LOC106613950 other downstream 681444 3943494 ~ 3982694 (+)
trnad-guc_14 NA other downstream 726002 3988052 ~ 3988123 (+)
G289531 NA other downstream 792407 4054457 ~ 4070367 (+)
clocka clock,LOC107701480 other downstream 986280 4248330 ~ 4309929 (+)
trnad-guc_17 NA other downstream 1066782 4328832 ~ 4338299 (+)

Expression


Co-expression Network