mgst3a (mgst3)


Basic Information

Item Value
gene id mgst3a
gene name mgst3
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 3897015 ~ 3901866 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026946993.2
GTGAGAGCTGCAATAATTTAAGGTGGAACAGAGAATTCAGATAAGAAATTGCaaagagaaaccagactcaggCTTCTCCTGTTGTTAGCCACACAACTGGTTCTGCATAACTACACGGCTGCGTCAGGTGAGCTGGCATAGATCATCCAGGTGTTTTTGTTCAGCTTGAGTTGAGAGCATGGCGGTTTTATCGAAGGATTATGGCTTTGTGCTGCTGACTGGAGCAGCCTCGATTATCCAGCTCAACTATCTGGCTTATGCTGTGGTGAAGGCTCGCATAAAATACAATGTGCAGTATCCCAGGATGTACAGCGATGACCCAGAGACTGGCCATATCTTCAACTGCATCCAGAGAGTTCACCAGAATACTGTTGAGGCCTTGCCTTCCTTCCTGTTCTTCTTGGCTGCTGGAGGGATATCCCATCCAcgTCTGGCCAGTGTTTTGGGAATAATCTGGATTGCTGGTAGAGCAGTGTATGCATATGGATACTCCTCTGGAGTGCCTGAGAAAAGGAAGCGTGGAGCTTTTGGGCACGTGGGTCTGCTGGGTCTGTTCTTGTGTACTGTGGACTCTGCCGTAACCATGCTGGGGTGTAGCTGCAAATCCAAGTGGCCCAGAGGGATGTTTAAAACCCTCtaaataaaacagacacacTATTACTTTATGTTTCCTTTTAATGTGTGACTGATTTTGTtagtaaaataaagtatatatattatacattgtaa
>XM_026946994.2
GTGTGAGAGCTGCAATAATTTAAGGTGGAACAGAGAATTCAGATAAGAAATTGCaaagagaaaccagactcaggCTTCTCCTGTTGTTAGCCACACAACTGGTTCTGCATAACTACACGGCTGCGTCAGGTGAGCTGGCATAGCTTGAGTTGAGAGCATGGCGGTTTTATCGAAGGATTATGGCTTTGTGCTGCTGACTGGAGCAGCCTCGATTATCCAGCTCAACTATCTGGCTTATGCTGTGGTGAAGGCTCGCATAAAATACAATGTGCAGTATCCCAGGATGTACAGCGATGACCCAGAGACTGGCCATATCTTCAACTGCATCCAGAGAGTTCACCAGAATACTGTTGAGGCCTTGCCTTCCTTCCTGTTCTTCTTGGCTGCTGGAGGGATATCCCATCCAcgTCTGGCCAGTGTTTTGGGAATAATCTGGATTGCTGGTAGAGCAGTGTATGCATATGGATACTCCTCTGGAGTGCCTGAGAAAAGGAAGCGTGGAGCTTTTGGGCACGTGGGTCTGCTGGGTCTGTTCTTGTGTACTGTGGACTCTGCCGTAACCATGCTGGGGTGTAGCTGCAAATCCAAGTGGCCCAGAGGGATGTTTAAAACCCTCtaaataaaacagacacacTATTACTTTATGTTTCCTTTTAATGTGTGACTGATTTTGTtagtaaaataaagtatatatattatacattgtaa
>XM_026946995.2
AATAATTTAAGGTGGAACAGAGAATTCAGATAAGAAATTGCaaagagaaaccagactcaggCTTCTCCTGTTGTTAGCCACACAACTGGTTCTGCATAACTACACGGCTGCGTCAGATCATCCAGGTGTTTTTGTTCAGCTTGAGTTGAGAGCATGGCGGTTTTATCGAAGGATTATGGCTTTGTGCTGCTGACTGGAGCAGCCTCGATTATCCAGCTCAACTATCTGGCTTATGCTGTGGTGAAGGCTCGCATAAAATACAATGTGCAGTATCCCAGGATGTACAGCGATGACCCAGAGACTGGCCATATCTTCAACTGCATCCAGAGAGTTCACCAGAATACTGTTGAGGCCTTGCCTTCCTTCCTGTTCTTCTTGGCTGCTGGAGGGATATCCCATCCAcgTCTGGCCAGTGTTTTGGGAATAATCTGGATTGCTGGTAGAGCAGTGTATGCATATGGATACTCCTCTGGAGTGCCTGAGAAAAGGAAGCGTGGAGCTTTTGGGCACGTGGGTCTGCTGGGTCTGTTCTTGTGTACTGTGGACTCTGCCGTAACCATGCTGGGGTGTAGCTGCAAATCCAAGTGGCCCAGAGGGATGTTTAAAACCCTCtaaataaaacagacacacTATTACTTTATGTTTCCTTTTAATGTGTGACTGATTTTGTtagtaaaataaagtatatatattatacattgtaa
>XM_026946996.2
TACAGGCGGTGTGTGAGAGCTGCAATAATTTAAGGTGGAACAGAGAATTCAGATAAGAAATTGCaaagagaaaccagactcaggCTTCTCCTGTTGTTAGCCACACAACTGGTTCTGCATAACTACACGGCTGCGTCAGCTTGAGTTGAGAGCATGGCGGTTTTATCGAAGGATTATGGCTTTGTGCTGCTGACTGGAGCAGCCTCGATTATCCAGCTCAACTATCTGGCTTATGCTGTGGTGAAGGCTCGCATAAAATACAATGTGCAGTATCCCAGGATGTACAGCGATGACCCAGAGACTGGCCATATCTTCAACTGCATCCAGAGAGTTCACCAGAATACTGTTGAGGCCTTGCCTTCCTTCCTGTTCTTCTTGGCTGCTGGAGGGATATCCCATCCAcgTCTGGCCAGTGTTTTGGGAATAATCTGGATTGCTGGTAGAGCAGTGTATGCATATGGATACTCCTCTGGAGTGCCTGAGAAAAGGAAGCGTGGAGCTTTTGGGCACGTGGGTCTGCTGGGTCTGTTCTTGTGTACTGTGGACTCTGCCGTAACCATGCTGGGGTGTAGCTGCAAATCCAAGTGGCCCAGAGGGATGTTTAAAACCCTCtaaataaaacagacacacTATTACTTTATGTTTCCTTTTAATGTGTGACTGATTTTGTtagtaaaataaagtatatatattatacattgtaa
>XM_034313927.1
gagaaaccagactcaggCTTCTCCTGTTGTTAGCCACACAACTGGTTCTGCATAACTACACGGCTGCGTCAGGTGAGCTGGCATAGGTGTTTTTGTTCAGCTTGAGTTGAGAGCATGGCGGTTTTATCGAAGGATTATGGCTTTGTGCTGCTGACTGGAGCAGCCTCGATTATCCAGCTCAACTATCTGGCTTATGCTGTGGTGAAGGCTCGCATAAAATACAATGTGCAGTATCCCAGGATGTACAGCGATGACCCAGAGACTGGCCATATCTTCAACTGCATCCAGAGAGTTCACCAGAATACTGTTGAGGCCTTGCCTTCCTTCCTGTTCTTCTTGGCTGCTGGAGGGATATCCCATCCAcgTCTGGCCAGTGTTTTGGGAATAATCTGGATTGCTGGTAGAGCAGTGTATGCATATGGATACTCCTCTGGAGTGCCTGAGAAAAGGAAGCGTGGAGCTTTTGGGCACGTGGGTCTGCTGGGTCTGTTCTTGTGTACTGTGGACTCTGCCGTAACCATGCTGGGGTGTAGCTGCAAATCCAAGTGGCCCAGAGGGATGTTTAAAACCCTCtaaataaaacagacacacTATTACTTTATGTTTCCTTTTAATGTGTGACTGATTTTGTtagtaaaataaagtatatatattatacattgtaa

Function

symbol description
mgst3 Enables glutathione peroxidase activity; identical protein binding activity; and leukotriene-C4 synthase activity. Involved in leukotriene biosynthetic process and lipid metabolic process. Located in intracellular membrane-bounded organelle and membrane.

NR:

description
PREDICTED: microsomal glutathione S-transferase 3

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005635 nuclear envelope cellular_component
GO:0004602 glutathione peroxidase activity molecular_function
GO:0004364 glutathione transferase activity molecular_function

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026946993.2 True 729 mRNA 0.45 6 3897027 3901866
XM_026946994.2 False 708 mRNA 0.45 6 3897025 3901866
XM_026946995.2 False 704 mRNA 0.45 6 3897038 3901866
XM_026946996.2 False 704 mRNA 0.45 6 3897015 3901866
XM_034313927.1 False 665 mRNA 0.46 6 3897082 3901866

Neighbor

gene id symbol gene type direction distance location
LOC117599795 LOC107568747 coding upstream 11354 3878822 ~ 3885661 (+)
kita kit coding upstream 88266 3781390 ~ 3808749 (+)
pdgfra pdgfra coding upstream 143584 3731642 ~ 3753431 (+)
gsx2 gsx2 coding upstream 176527 3718106 ~ 3720488 (+)
fip1l1a LOC108257999 coding upstream 312010 3554737 ~ 3585005 (+)
LOC113546823 LOC108257899 coding downstream 3828 3905694 ~ 3917080 (+)
pfas pfas,LOC107665308,LOC107556148,LOC107593806,LOC107737373,LOC107737297 coding downstream 89801 3991667 ~ 4016550 (+)
hook1 hook1 coding downstream 122816 4024682 ~ 4045273 (+)
ppat ppat,LOC107683925,LOC107721366,LOC107737308,LOC107556156 coding downstream 199803 4101669 ~ 4115455 (+)
aasdh aasdh coding downstream 222192 4124058 ~ 4137561 (+)
G289378 kdr,LOC107675844,LOC107578973 non-coding upstream 52336 3843115 ~ 3844679 (+)
G289363 NA non-coding upstream 157801 3710701 ~ 3739214 (+)
G289351 NA non-coding upstream 209099 3623064 ~ 3687916 (+)
G289240 NA non-coding upstream 402681 3493951 ~ 3494334 (+)
G289164 NA non-coding upstream 513133 3383677 ~ 3383882 (+)
G289515 NA non-coding downstream 40408 3942274 ~ 3974015 (+)
G289517 NA non-coding downstream 46330 3948196 ~ 3948458 (+)
G289522 NA non-coding downstream 82881 3984747 ~ 4350564 (+)
G289533 NA non-coding downstream 145343 4047209 ~ 4055985 (+)
G289532 NA non-coding downstream 158878 4060744 ~ 4066425 (+)
cnstb LOC108257742 other upstream 1400963 2485036 ~ 2496052 (+)
LOC113546780 NA other upstream 1754834 2133158 ~ 2142181 (+)
ptchd4 ptchd4,LOC107732383,LOC107553442,LOC107732542,LOC107601530 other upstream 1875752 1996120 ~ 2021263 (+)
srp9 srp9,LOC107553440,LOC107601484 other upstream 2536899 1358186 ~ 1360116 (+)
LOC117599677 NA other upstream 2632383 1259176 ~ 1264632 (+)
ipo13 ipo13,LOC107697216,LOC107745904,LOC107593276,LOC107691006,LOC106613950 other downstream 41628 3943494 ~ 3982694 (+)
trnad-guc_14 NA other downstream 86186 3988052 ~ 3988123 (+)
G289531 NA other downstream 152591 4054457 ~ 4070367 (+)
clocka clock,LOC107701480 other downstream 346464 4248330 ~ 4309929 (+)
trnad-guc_17 NA other downstream 426966 4328832 ~ 4338299 (+)

Expression


Co-expression Network