trnad-guc_14


Basic Information

Item Value
gene id trnad-guc_14
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 3988052 ~ 3988123 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnad-guc_14
TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnad-guc_14 True 72 tRNA 0.60 1 3988052 3988123

Neighbor

gene id symbol gene type direction distance location
LOC113546823 LOC108257899 coding upstream 70972 3905694 ~ 3917080 (+)
mgst3a mgst3 coding upstream 86186 3897015 ~ 3901866 (+)
LOC117599795 LOC107568747 coding upstream 102391 3878822 ~ 3885661 (+)
kita kit coding upstream 179303 3781390 ~ 3808749 (+)
pdgfra pdgfra coding upstream 234621 3731642 ~ 3753431 (+)
pfas pfas,LOC107665308,LOC107556148,LOC107593806,LOC107737373,LOC107737297 coding downstream 3544 3991667 ~ 4016550 (+)
hook1 hook1 coding downstream 36559 4024682 ~ 4045273 (+)
ppat ppat,LOC107683925,LOC107721366,LOC107737308,LOC107556156 coding downstream 113546 4101669 ~ 4115455 (+)
aasdh aasdh coding downstream 135935 4124058 ~ 4137561 (+)
cep135 cep135 coding downstream 188408 4176531 ~ 4196440 (+)
G289515 NA non-coding upstream 14037 3942274 ~ 3974015 (+)
G289517 NA non-coding upstream 39594 3948196 ~ 3948458 (+)
G289378 kdr,LOC107675844,LOC107578973 non-coding upstream 143373 3843115 ~ 3844679 (+)
G289363 NA non-coding upstream 248838 3710701 ~ 3739214 (+)
G289351 NA non-coding upstream 300136 3623064 ~ 3687916 (+)
G289533 NA non-coding downstream 59086 4047209 ~ 4055985 (+)
G289532 NA non-coding downstream 72621 4060744 ~ 4066425 (+)
G289530 LOC108257764 non-coding downstream 73695 4061818 ~ 4073966 (+)
LOC117599777 NA non-coding downstream 250903 4239026 ~ 4243951 (+)
G289615 NA non-coding downstream 277260 4265383 ~ 4334959 (+)
ipo13 ipo13,LOC107697216,LOC107745904,LOC107593276,LOC107691006,LOC106613950 other upstream 5358 3943494 ~ 3982694 (+)
cnstb LOC108257742 other upstream 1492000 2485036 ~ 2496052 (+)
LOC113546780 NA other upstream 1845871 2133158 ~ 2142181 (+)
ptchd4 ptchd4,LOC107732383,LOC107553442,LOC107732542,LOC107601530 other upstream 1966789 1996120 ~ 2021263 (+)
srp9 srp9,LOC107553440,LOC107601484 other upstream 2627936 1358186 ~ 1360116 (+)
G289531 NA other downstream 66334 4054457 ~ 4070367 (+)
clocka clock,LOC107701480 other downstream 260207 4248330 ~ 4309929 (+)
trnad-guc_17 NA other downstream 340709 4328832 ~ 4338299 (+)
LOC113545190 NA other downstream 612932 4601055 ~ 4609601 (+)
dnm3a dnm3,dnm3a other downstream 953828 4941951 ~ 4979400 (+)

Expression


Co-expression Network