trnad-guc_22


Basic Information

Item Value
gene id trnad-guc_22
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 4349808 ~ 4349879 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnad-guc_22
TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnad-guc_22 True 72 tRNA 0.60 1 4349808 4349879

Neighbor

gene id symbol gene type direction distance location
trnad-guc_19 NA coding upstream 11834 4337903 ~ 4337974 (+)
trnad-guc_18 NA coding upstream 16179 4333558 ~ 4333629 (+)
trnad-guc_16 NA coding upstream 22266 4327471 ~ 4327542 (+)
nmu NA coding upstream 110887 4235827 ~ 4238921 (+)
cep135 cep135 coding upstream 153368 4176531 ~ 4196440 (+)
LOC113545323 LOC108258072,LOC107721804,LOC107581484,LOC107597850,LOC108414547,LOC107712838,LOC107658162 coding downstream 16886 4366765 ~ 4396120 (+)
LOC113545214 LOC108257527 coding downstream 57889 4407768 ~ 4419833 (+)
echdc2 echdc2,LOC107669145 coding downstream 75755 4425634 ~ 4432355 (+)
LOC113545289 LOC108258110,LOC108414737,LOC103029237,LOC107658161,LOC107721808,LOC107597864,LOC107669143 coding downstream 97768 4447647 ~ 4450922 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857 coding downstream 103437 4453316 ~ 4557487 (+)
G289615 NA non-coding upstream 14849 4265383 ~ 4334959 (+)
G289619 NA non-coding upstream 19536 4319461 ~ 4330272 (+)
LOC117599777 NA non-coding upstream 105857 4239026 ~ 4243951 (+)
G289530 LOC108257764 non-coding upstream 275842 4061818 ~ 4073966 (+)
G289532 NA non-coding upstream 283383 4060744 ~ 4066425 (+)
LOC117599675 LOC107732010 non-coding downstream 869 4350748 ~ 4352801 (+)
G289831 NA non-coding downstream 83356 4433235 ~ 4434790 (+)
G289866 angptl1,angptl1a non-coding downstream 180049 4529928 ~ 4539840 (+)
LOC117599674 NA non-coding downstream 274263 4624142 ~ 4627837 (+)
LOC113545162 NA non-coding downstream 354783 4704662 ~ 4798444 (+)
trnad-guc_17 NA other upstream 11509 4328832 ~ 4338299 (+)
clocka clock,LOC107701480 other upstream 39879 4248330 ~ 4309929 (+)
G289531 NA other upstream 279441 4054457 ~ 4070367 (+)
trnad-guc_14 NA other upstream 361685 3988052 ~ 3988123 (+)
ipo13 ipo13,LOC107697216,LOC107745904,LOC107593276,LOC107691006,LOC106613950 other upstream 367114 3943494 ~ 3982694 (+)
LOC113545190 NA other downstream 251176 4601055 ~ 4609601 (+)
dnm3a dnm3,dnm3a other downstream 592072 4941951 ~ 4979400 (+)
usp24 usp24 other downstream 1385594 5735473 ~ 5801693 (+)
b4galt6 b4galt6,LOC107712262,LOC107687169,LOC107712895 other downstream 1786041 6135920 ~ 6160040 (+)
tdh tdh,LOC107561940,LOC103024478,LOC108435012,LOC107723287 other downstream 2662863 7012742 ~ 7019686 (+)

Expression


Co-expression Network