G274918


Basic Information

Item Value
gene id G274918
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 31803 ~ 33697 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325769
acacgccagTATACACTCccctacacacagaaacacacacctccgatacacacacatatacacacgccagTATACATtcccatacacacagacacacacacctccgatacacacacacacgtacacacatatacacatggcAGTATACATtcccatacacacagacacacacacctccgatacacacacacacgtacacacatatacacacgccagTATACATTCCcgtacatacagacacacacctctgatatacatacacacatacacacatatacacacgccagTATACACtcccatacatacagacacacacctctgatatacatacacacatacacacatatacacacgccagTATACACtcccatacacacagacacacacacctccaatacacacacacatacacacatatacacacgccagTATACATTCCCatacgcacagacacacacacctccgatacatacacacatatacacacgccaCTATACATTCCCatacgcacagacacacacacctccgatacacacacacacatacacacatataca
>TU325770
acacgccagTATACATTCCcgtacatacagacacacacctctgatatacatacacacatacacacatatacacacgccagTATACACtcccatacacacagacacacacacctccaatacacacacacatacacacatatacacacgccagTATACATTCCCatacgcacagacacacacacctccgatacatacacacatatacacacgccaCTATACATTCCCatacgcacagacacacacacctccgatacacacacacacatacacacatataca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325769 True 557 lncRNA 0.45 4 31803 33697
TU325770 False 279 lncRNA 0.44 2 31803 32146

Neighbor

gene id symbol gene type direction distance location
zdhhc17 zdhhc17,LOC102798393 coding upstream 55776 89473 ~ 107837 (-)
cmah LOC108279485 coding upstream 97994 131691 ~ 164741 (-)
LOC117599422 LOC108279481,LOC108262260,LOC108279495 coding upstream 342760 376457 ~ 394253 (-)
LOC117599468 LOC108262260 coding upstream 388816 422513 ~ 475215 (-)
LOC117599469 LOC108262260 coding upstream 447877 481574 ~ 570011 (-)
G274968 NA non-coding upstream 48926 82623 ~ 83248 (-)
G274982 NA non-coding upstream 134907 168604 ~ 174698 (-)
G275028 NA non-coding upstream 213626 247323 ~ 280961 (-)
G275029 NA non-coding upstream 216974 250671 ~ 285231 (-)
G275024 NA non-coding upstream 257953 291650 ~ 292596 (-)
G274979 NA other upstream 110886 144583 ~ 146040 (-)
LOC117599453 yeats4,LOC107555875,LOC107590554 other upstream 214639 248336 ~ 253845 (-)
LOC113535352 LOC107729140 other upstream 247737 281434 ~ 287052 (-)
LOC113531599 LOC108262260,LOC108279491,LOC108279481 other upstream 321277 354974 ~ 369037 (-)
LOC113531866 LOC108279481,LOC108262260,LOC108279491 other upstream 370264 403961 ~ 557687 (-)

Expression


Co-expression Network