G275029


Basic Information

Item Value
gene id G275029
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 250671 ~ 285231 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325917
TGTTacgttattttatttatttacgtatCATTTTATTGCGTAACAGAAGTAGCGCTAGTGGAGAAATCACGCAACAgattcatgtttgtgtttcattGACTTGGAAAATCCTTTAACGTAACCTGCACCGCAGAGCGTAACTGTACAGCACGGTGCATAAGTATGTGCCCCCCGTctacatgatgctgccaccaccgtgcttcactgtaaACCTGCTGGAGAAACAACGTACAACTTCTAGCATTCGGGacgtacctgtgtgtgtgtgtgtgtgtgtgtgtgtattggggtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325917 True 331 lncRNA 0.45 2 250671 285231

Neighbor

gene id symbol gene type direction distance location
cmah LOC108279485 coding downstream 85930 131691 ~ 164741 (-)
zdhhc17 zdhhc17,LOC102798393 coding downstream 142834 89473 ~ 107837 (-)
osbpl8 osbpl8,LOC107555879 coding downstream 200634 14021 ~ 50037 (-)
LOC117599422 LOC108279481,LOC108262260,LOC108279495 coding upstream 91226 376457 ~ 394253 (-)
LOC117599468 LOC108262260 coding upstream 137282 422513 ~ 475215 (-)
LOC117599469 LOC108262260 coding upstream 196343 481574 ~ 570011 (-)
LOC117595727 LOC108262260 coding upstream 378494 663725 ~ 683075 (-)
LOC113543469 LOC108279491,LOC108262260 coding upstream 400805 686036 ~ 694483 (-)
G274982 NA non-coding downstream 75973 168604 ~ 174698 (-)
G274968 NA non-coding downstream 167423 82623 ~ 83248 (-)
G274918 NA non-coding downstream 216974 31803 ~ 33697 (-)
G275024 NA non-coding upstream 6419 291650 ~ 292596 (-)
G275049 NA non-coding upstream 61983 347214 ~ 347449 (-)
G275134 NA non-coding upstream 97694 382925 ~ 679665 (-)
G275141 NA non-coding upstream 155562 440793 ~ 448307 (-)
G275126 NA non-coding upstream 202561 487792 ~ 488922 (-)
G274979 NA other downstream 104631 144583 ~ 146040 (-)
LOC113531599 LOC108262260,LOC108279491,LOC108279481 other upstream 69743 354974 ~ 369037 (-)
LOC113531866 LOC108279481,LOC108262260,LOC108279491 other upstream 118730 403961 ~ 557687 (-)
LOC113532194 far1,LOC108279482,LOC107590516,LOC103366393 other upstream 229753 514984 ~ 525025 (-)
G275152 LOC108261384,LOC108261611,LOC108279477,LOC108262118,LOC108261705,LOC108262466 other upstream 251215 536446 ~ 539298 (-)
LOC117599466 LOC108262260,LOC108279495,LOC108279491 other upstream 275476 560707 ~ 629004 (-)

Expression


Co-expression Network