G276340


Basic Information

Item Value
gene id G276340
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 3736130 ~ 3737077 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU327549
TGCGGTTTAATACATTTCTTAAAGTTGTTAGAGTTTatactggaaaaataaaatcattttatataaaagaataaacaaTAAACCATAAAGAAATGGTAGACTGGATTTTTGGGTTTATTAAGTATgaaatttatgcatatttatttagatgaagGCTCATTTgtattgtttagattttaaGGTGTTCAATTATCATAAGATTAATTGTCAAGtctatttgttttaataactcTATTGTTCTGTAGCGTCTCCTCTTTAAATTTACATCCATGCACATTTTACGTCTTTGGTTTCGTACTGAAGCCAAAACACGAACGTTTCCTTTAAGAATTTAAGCTACATTACCTGTACAGTTTATTATACAGACCGTTCCACCTTTAGATTTTATAATAAACTCAAACAGATGATCGGGAGAATGTTAgagtttaataaatgaaaactgatttacaggaaaaaaaaagaattacacaCATAGAAATCAcagggtgtgtttttttttttttttgcgaggTAACAAAACTCCGCCTCATTATTACATCATGCACTTTAAGTGTAAAATGCAGCGTTCACTGTTCACCGCGTTTCACACCGTTTTCACCTCCAACTGTTCTGAAGAGGAACAGCGTTATATAATTCAGCATTACGTACAGACTCACACATCTgtctgcatcacacacacaataaaacagtcCATAAACTGTACATTAAaccaccactcacacacacacacacactcaagtgtgtgtgtatgtgtgtatctacCAGGCCAgacccttcttcttcttcttctggcccGTTTTCTTCCCCAGGCGCTGTTTTTTGAGTTTCTTGGCTTTTCTCTGGCTCATCCACACTGGATACTGTCCATGTTCATTCAGCAGAGTGTCCTTGCTCCGCTTGCTGTCCATCTCCATCTTCCCCATCTcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327549 True 928 TUCP 0.36 2 3736130 3737077

Neighbor

gene id symbol gene type direction distance location
ppfia2 ppfia2,LOC107680027,LOC107694182 coding downstream 44444 3545076 ~ 3691686 (-)
pawr pawr coding downstream 489134 3205288 ~ 3246996 (-)
LOC117599441 LOC108261611 coding downstream 1058098 2672021 ~ 2678032 (-)
LOC117599440 LOC108261400,LOC108279477,LOC108262466,LOC108261384,LOC108261705,LOC108261423,LOC108261555,LOC108261611,LOC108261687 coding downstream 1066794 2668355 ~ 2669336 (-)
LOC117599439 LOC108261384,LOC108279477,LOC108261932,LOC108261705,LOC108261610,LOC108261515,LOC108261687,LOC108261554,LOC108262337 coding downstream 1068615 2664397 ~ 2667515 (-)
hcls1 LOC108279643,LOC107095911,LOC105918344,LOC103358095,LOC102201149,LOC102292035,LOC101481917 coding upstream 1807 3738884 ~ 3755857 (-)
orc5 orc5 coding upstream 61264 3798341 ~ 3811616 (-)
kmt2e kmt2e coding upstream 120438 3857515 ~ 3906653 (-)
kdm7aa kdm7a coding upstream 182225 3919302 ~ 3945301 (-)
cd36 cd36 coding upstream 307629 4044706 ~ 4060514 (-)
G276153 NA non-coding downstream 95347 3639967 ~ 3640783 (-)
LOC117599595 NA non-coding downstream 164204 3565035 ~ 3571926 (-)
G276049 NA non-coding downstream 320990 3414868 ~ 3415140 (-)
G276038 NA non-coding downstream 363112 3372624 ~ 3373018 (-)
LOC113523901 NA non-coding downstream 379697 3355454 ~ 3356433 (-)
G276342 lhfpl3 non-coding upstream 65316 3802393 ~ 3815365 (-)
G276353 NA non-coding upstream 75463 3812540 ~ 3813351 (-)
G276384 NA non-coding upstream 164185 3901262 ~ 3904931 (-)
G276387 NA non-coding upstream 176462 3913539 ~ 3913989 (-)
G276388 NA non-coding upstream 178251 3915328 ~ 3916117 (-)
G276075 NA other downstream 197387 3536997 ~ 3538743 (-)
lin7a lin7a other downstream 242114 3430190 ~ 3494016 (-)
rps16 rps16 other downstream 351207 3299257 ~ 3384923 (-)
ppp1r12a ppp1r12a,LOC107694147,LOC106609419 other downstream 401113 3226595 ~ 3335017 (-)
G275981 NA other downstream 534833 3142534 ~ 3201297 (-)
golgb1 LOC108279640 other upstream 22134 3759211 ~ 3829402 (-)
G276421 NA other upstream 345201 4082278 ~ 4091863 (-)
G276530 slc35e3,LOC107556774,LOC107710682 other upstream 560783 4297860 ~ 4300524 (-)
LOC113523868 NA other upstream 594183 4331260 ~ 4343545 (-)
LOC117599555 LOC108279645 other upstream 620462 4357539 ~ 4457121 (-)

Expression


Co-expression Network