G279832


Basic Information

Item Value
gene id G279832
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 9804178 ~ 9804403 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU331669
GGAAAACAGGCCGAGACAATGATAAtcctaataaaaaataaattcaaattcaattgcAAGCCAGTGCTAGTCAATAAAGAGACACAAGTCTGCTCTCATAAAATAACCTGTAACTCACTTTAAAGTTGCCCATAATTTTGAAATTCTTAGGTACAAGTTTGAAACAAATTTCTACAAAATGCAGATTTAGATTTTGATTGGGGTGCACTTCTGGAGACCACCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331669 True 226 lncRNA 0.34 1 9804178 9804403

Neighbor

gene id symbol gene type direction distance location
sema3aa LOC108280003,LOC108436009,LOC103023715,LOC107562295,LOC107757236,LOC107560735,LOC107694310 coding downstream 61500 9707450 ~ 9742678 (-)
pcloa pclo,pcloa coding downstream 105982 9629331 ~ 9698196 (-)
ankrd16 ankrd16 coding downstream 180583 9617408 ~ 9623595 (-)
trnay-gua_2 NA coding downstream 181559 9622533 ~ 9622619 (-)
gdi2 gdi2,LOC108279819,LOC108436005,LOC107754057,LOC107560733,LOC107694307 coding downstream 188878 9600577 ~ 9615300 (-)
ccdc59 ccdc59 coding upstream 90682 9895085 ~ 9897952 (-)
pik3cg pik3cg,LOC107656384,LOC107590535,LOC107658948,LOC107583938,LOC107705338 coding upstream 202795 10007198 ~ 10015790 (-)
lmod2b lmod2,lmod2b,LOC108411152,LOC101068860,LOC103382826 coding upstream 643262 10447665 ~ 10450902 (-)
asb15b LOC108280075 coding upstream 647175 10451578 ~ 10461046 (-)
ptprz1b LOC108280061,LOC108435099 coding upstream 666133 10470536 ~ 10512149 (-)
G279730 NA non-coding downstream 175025 9627337 ~ 9629153 (-)
G279728 NA non-coding downstream 179059 9624599 ~ 9625119 (-)
G279641 NA non-coding downstream 270757 9533222 ~ 9533421 (-)
G279625 NA non-coding downstream 284100 9519833 ~ 9520078 (-)
G279624 net1 non-coding downstream 284451 9517986 ~ 9519727 (-)
G279967 NA non-coding upstream 142928 9947331 ~ 9947536 (-)
G280002 NA non-coding upstream 199938 10004341 ~ 10004812 (-)
G280228 NA non-coding upstream 273683 10078086 ~ 10078356 (-)
G280233 NA non-coding upstream 283446 10087849 ~ 10088120 (-)
G280384 NA non-coding upstream 614515 10418918 ~ 10513153 (-)
G279415 NA other downstream 595615 9207351 ~ 9208563 (-)
G278912 NA other downstream 1584498 8218561 ~ 8219680 (-)
G278634 NA other downstream 1736101 8053088 ~ 8068077 (-)
avpr1ab LOC108279517 other downstream 1833607 7966819 ~ 7970571 (-)
camk1da camk1da,LOC108279878,LOC108428135,LOC107743755,LOC107658855,LOC107726013,LOC107656221 other downstream 2304099 7421988 ~ 7500079 (-)
cracr2ab LOC108280118 other upstream 74078 9878481 ~ 9892386 (-)
LOC113532274 NA other upstream 451569 10255972 ~ 10296198 (-)
si:ch211-51e12.7 LOC108280090 other upstream 1190702 10995105 ~ 11007143 (-)
sobpb LOC108279441 other upstream 1274765 11079168 ~ 11094176 (-)
vegfab vegfa,LOC108435123 other upstream 1434532 11238935 ~ 11259412 (-)

Expression


Co-expression Network