Gene
RNA
| Item | Value |
|---|---|
| gene id | G280360 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 10468686 ~ 10470375 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU332265 | True | 359 | lncRNA | 0.42 | 2 | 10468686 | 10470375 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| asb15b | LOC108280075 | coding | downstream | 7640 | 10451578 ~ 10461046 (-) |
| lmod2b | lmod2,lmod2b,LOC108411152,LOC101068860,LOC103382826 | coding | downstream | 17784 | 10447665 ~ 10450902 (-) |
| pik3cg | pik3cg,LOC107656384,LOC107590535,LOC107658948,LOC107583938,LOC107705338 | coding | downstream | 452896 | 10007198 ~ 10015790 (-) |
| ccdc59 | ccdc59 | coding | downstream | 570734 | 9895085 ~ 9897952 (-) |
| tspan11 | tspan11,LOC108279944,LOC107720401,LOC107593980,LOC107560736,LOC107694254,LOC108436010,LOC107690651 | coding | downstream | 614357 | 9755585 ~ 9854329 (-) |
| ptprz1b | LOC108280061,LOC108435099 | coding | upstream | 161 | 10470536 ~ 10512149 (-) |
| slc13a4 | slc13a4,LOC107656439 | coding | upstream | 62406 | 10532781 ~ 10548341 (-) |
| LOC113532144 | best3 | coding | upstream | 148543 | 10618918 ~ 10629763 (-) |
| ptprb | ptprb,LOC107562139 | coding | upstream | 313953 | 10784328 ~ 10828385 (-) |
| ptprr | ptprr | coding | upstream | 360511 | 10830886 ~ 10885436 (-) |
| G280398 | NA | non-coding | downstream | 3056 | 10463954 ~ 10465630 (-) |
| G280389 | NA | non-coding | downstream | 32840 | 10430631 ~ 10435846 (-) |
| G280233 | NA | non-coding | downstream | 380566 | 10087849 ~ 10088120 (-) |
| G280228 | NA | non-coding | downstream | 390330 | 10078086 ~ 10078356 (-) |
| G280002 | NA | non-coding | downstream | 463874 | 10004341 ~ 10004812 (-) |
| G280527 | NA | non-coding | upstream | 306388 | 10776763 ~ 10777897 (-) |
| G280615 | NA | non-coding | upstream | 312986 | 10783361 ~ 10784293 (-) |
| G280640 | NA | non-coding | upstream | 435798 | 10906173 ~ 10908630 (-) |
| G280652 | NA | non-coding | upstream | 460363 | 10930738 ~ 10930980 (-) |
| G280812 | NA | non-coding | upstream | 699511 | 11169886 ~ 11172446 (-) |
| LOC113532274 | NA | other | downstream | 172488 | 10255972 ~ 10296198 (-) |
| cracr2ab | LOC108280118 | other | downstream | 576300 | 9878481 ~ 9892386 (-) |
| G279415 | NA | other | downstream | 1260123 | 9207351 ~ 9208563 (-) |
| G278912 | NA | other | downstream | 2249006 | 8218561 ~ 8219680 (-) |
| G278634 | NA | other | downstream | 2400609 | 8053088 ~ 8068077 (-) |
| si:ch211-51e12.7 | LOC108280090 | other | upstream | 524730 | 10995105 ~ 11007143 (-) |
| sobpb | LOC108279441 | other | upstream | 608793 | 11079168 ~ 11094176 (-) |
| vegfab | vegfa,LOC108435123 | other | upstream | 768560 | 11238935 ~ 11259412 (-) |
| G281074 | rad51ap1 | other | upstream | 1115929 | 11586304 ~ 11588024 (-) |
| G281092 | mansc1 | other | upstream | 1187515 | 11657890 ~ 11660327 (-) |
