G281021


Basic Information

Item Value
gene id G281021
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 11359362 ~ 11359636 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU333037
TTCAATTTCATtgtaaaatgacaataaagctattctattctattctattctattctattcattaTTTCCATTACCTGGCTACATGAGTTAGTGAGGTAAAACAATAGACAAGTTATTTTAATCCTTTACTATGGCAGTTCAGCCTCTTCTTGCTTTTATCTCACAATGGGAAACGAAACTGTGGATAAGCATCTGGCAGatgatatttcttttatttttatcattacaattttaaagattcctACACAAGTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU333037 True 255 lncRNA 0.31 2 11359362 11359636

Neighbor

gene id symbol gene type direction distance location
rsph9 rsph9 coding downstream 14607 11329028 ~ 11344755 (-)
mapre3b mapre3,mapre3b,LOC108425644,LOC107594695 coding downstream 282600 11067737 ~ 11076762 (-)
tmem214 tmem214,LOC104961504,LOC106608390 coding downstream 293415 11053196 ~ 11065947 (-)
agbl5 agbl5 coding downstream 308756 11035084 ~ 11050606 (-)
LOC113531821 gen1 coding downstream 330957 11012219 ~ 11028405 (-)
faxca LOC108279701,LOC107726027,LOC107710104,LOC107656374,LOC107579532,LOC106571486,LOC106607948 coding upstream 66422 11426058 ~ 11441607 (-)
ccnc ccnc,LOC107579661 coding upstream 84474 11444110 ~ 11454450 (-)
pgm3 pgm3,LOC107579473,LOC107656266 coding upstream 102251 11461887 ~ 11469636 (-)
foxm1 foxm1 coding upstream 127868 11487504 ~ 11492269 (-)
ada2b LOC108279883 coding upstream 230177 11589813 ~ 11596577 (-)
G280841 NA non-coding downstream 99371 11259791 ~ 11259991 (-)
G280818 NA non-coding downstream 175219 11183066 ~ 11184143 (-)
G280817 NA non-coding downstream 177311 11179931 ~ 11182051 (-)
G280812 NA non-coding downstream 186916 11169886 ~ 11172446 (-)
G280652 NA non-coding downstream 428382 10930738 ~ 10930980 (-)
G281057 NA non-coding upstream 202089 11561725 ~ 11562064 (-)
G281070 NA non-coding upstream 223757 11583393 ~ 11583637 (-)
G281075 NA non-coding upstream 229367 11589003 ~ 11589687 (-)
G281102 lrp6,LOC102306404,LOC101476287 non-coding upstream 348054 11707690 ~ 11710984 (-)
G281362 NA non-coding upstream 673460 12033096 ~ 12036362 (-)
vegfab vegfa,LOC108435123 other downstream 99950 11238935 ~ 11259412 (-)
sobpb LOC108279441 other downstream 265186 11079168 ~ 11094176 (-)
si:ch211-51e12.7 LOC108280090 other downstream 352219 10995105 ~ 11007143 (-)
LOC113532274 NA other downstream 1063164 10255972 ~ 10296198 (-)
cracr2ab LOC108280118 other downstream 1466976 9878481 ~ 9892386 (-)
G281074 rad51ap1 other upstream 226668 11586304 ~ 11588024 (-)
G281092 mansc1 other upstream 298254 11657890 ~ 11660327 (-)
dusp16 dusp16 other upstream 361427 11721063 ~ 11752913 (-)
LOC113531972 muc19,LOC108280038 other upstream 3780289 15139925 ~ 15184075 (-)
alg12 alg12 other upstream 5041285 16400921 ~ 16406863 (-)

Expression


Co-expression Network