Gene
RNA
| Item | Value |
|---|---|
| gene id | G282673 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 14739216 ~ 14739437 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU334999 | True | 222 | lncRNA | 0.46 | 1 | 14739216 | 14739437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kin | kin | coding | downstream | 880543 | 13851543 ~ 13858673 (-) |
| LOC113531720 | itih5 | coding | downstream | 909708 | 13808409 ~ 13829508 (-) |
| LOC113532385 | kcna1a,kcna1l,LOC108279524,LOC108425346,LOC105912431 | coding | downstream | 951782 | 13782762 ~ 13787434 (-) |
| LOC117599536 | itih5 | coding | downstream | 975426 | 13751523 ~ 13763790 (-) |
| sfmbt2 | sfmbt2 | coding | downstream | 1014586 | 13665323 ~ 13724630 (-) |
| LOC113531970 | LOC108279954 | coding | upstream | 134413 | 14873850 ~ 14885572 (-) |
| slc6a1l | LOC108279609,LOC108427058,LOC107584717,LOC107689715,LOC107748475,LOC107597007,LOC101061665 | coding | upstream | 293211 | 15032648 ~ 15047471 (-) |
| LOC113531968 | LOC108279915,LOC107597036 | coding | upstream | 320075 | 15059512 ~ 15078787 (-) |
| pyroxd1 | pyroxd1,LOC108279593 | coding | upstream | 361919 | 15101356 ~ 15111265 (-) |
| LOC113531721 | iapp | coding | upstream | 376790 | 15116227 ~ 15118561 (-) |
| G282649 | NA | non-coding | downstream | 8212 | 14715045 ~ 14731004 (-) |
| G282410 | NA | non-coding | downstream | 348659 | 14389823 ~ 14390557 (-) |
| G282409 | NA | non-coding | downstream | 365703 | 14372731 ~ 14373513 (-) |
| G282404 | NA | non-coding | downstream | 406084 | 14332932 ~ 14333132 (-) |
| G282368 | NA | non-coding | downstream | 769319 | 13953999 ~ 13969897 (-) |
| G282718 | NA | non-coding | upstream | 73485 | 14812922 ~ 15105995 (-) |
| LOC113532334 | NA | non-coding | upstream | 469911 | 15209348 ~ 15213255 (-) |
| G282950 | NA | non-coding | upstream | 531557 | 15270994 ~ 15271200 (-) |
| G282999 | NA | non-coding | upstream | 611269 | 15350706 ~ 15353441 (-) |
| G283022 | NA | non-coding | upstream | 648511 | 15387948 ~ 15390101 (-) |
| dusp16 | dusp16 | other | downstream | 2986303 | 11721063 ~ 11752913 (-) |
| G281092 | mansc1 | other | downstream | 3078889 | 11657890 ~ 11660327 (-) |
| G281074 | rad51ap1 | other | downstream | 3151192 | 11586304 ~ 11588024 (-) |
| vegfab | vegfa,LOC108435123 | other | downstream | 3479804 | 11238935 ~ 11259412 (-) |
| sobpb | LOC108279441 | other | downstream | 3645040 | 11079168 ~ 11094176 (-) |
| LOC113531972 | muc19,LOC108280038 | other | upstream | 400488 | 15139925 ~ 15184075 (-) |
| alg12 | alg12 | other | upstream | 1661484 | 16400921 ~ 16406863 (-) |
| LOC113532230 | LOC108280029,LOC107562148,LOC107687569,LOC107741714,LOC105912408 | other | upstream | 2099098 | 16838535 ~ 16853395 (-) |
| phf21b | phf21b | other | upstream | 2219075 | 16958512 ~ 17027865 (-) |
| LOC113532261 | smkr1 | other | upstream | 3239326 | 17978763 ~ 17988280 (-) |
