G286698


Basic Information

Item Value
gene id G286698
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 22097608 ~ 22097821 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU339531
tttatttgtcacatattcattacagtgaaattcctttttcacatatcccagcttgttaggaagctggcatcagagcacagggtcagccatgataggGCCCCCCTGGAGTAGAGAGGGTCAAGGGCCatactcaagggcccaacagtagcCAATGGGTGGcactggggcttgaacccccaaccatctgatcagtaacccagagccttaactgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU339531 True 214 lncRNA 0.50 1 22097608 22097821

Neighbor

gene id symbol gene type direction distance location
plekha5 plekha5,LOC106609184 coding downstream 8189 21983016 ~ 22089419 (-)
aebp2 aebp2,LOC101464281 coding downstream 117286 21965132 ~ 21980322 (-)
pde3a pde3a coding downstream 165621 21860480 ~ 21931987 (-)
slco1c1 slco1c1,LOC108279430,LOC108435080,LOC107729145,LOC107656392,LOC107590530,LOC107658953 coding downstream 255173 21796905 ~ 21842435 (-)
cog5 cog5,LOC107656447,LOC107583928,LOC107658957 coding downstream 315523 21761681 ~ 21782085 (-)
lrrc4.1 lrrc4.1,LOC108279533 coding upstream 320284 22418105 ~ 22423754 (-)
si:dkey-159a18.1 LOC108279534 coding upstream 399568 22497389 ~ 22523790 (-)
LOC113544588 prr5 coding upstream 532226 22630047 ~ 22659391 (-)
pax4 pax4 coding upstream 573287 22671108 ~ 22683049 (-)
LOC113544635 LOC108279625,LOC108279584,LOC100305028,LOC108279586,LOC108279618,LOC108279585 coding upstream 718014 22815835 ~ 22817249 (-)
G286694 NA non-coding downstream 22329 22072211 ~ 22075279 (-)
G286613 NA non-coding downstream 310236 21786152 ~ 21787372 (-)
LOC113544611 NA non-coding downstream 445177 21651622 ~ 21652431 (-)
LOC113544500 NA non-coding downstream 499208 21584065 ~ 21598400 (-)
G286546 NA non-coding downstream 523508 21573825 ~ 21574100 (-)
G286700 NA non-coding upstream 18776 22116597 ~ 22116953 (-)
LOC113544512 NA non-coding upstream 50452 22148273 ~ 22149018 (-)
G286740 NA non-coding upstream 91498 22189319 ~ 22235065 (-)
G286810 NA non-coding upstream 238083 22335904 ~ 22453567 (-)
G286832 NA non-coding upstream 344229 22442050 ~ 22447429 (-)
LOC113544587 NA other downstream 626508 21460826 ~ 21471100 (-)
G285607 NA other downstream 1777558 20313067 ~ 20320050 (-)
rap1b rap1b,LOC106576640,LOC107695907 other downstream 2362376 19678283 ~ 19735232 (-)
LOC113532190 NA other downstream 3349775 18698921 ~ 18747833 (-)
trnae-cuc_38 NA other downstream 3885215 18212322 ~ 18212393 (-)
G286852 irf5,LOC107655585 other upstream 388415 22486236 ~ 22489467 (-)

Expression


Co-expression Network