G286810


Basic Information

Item Value
gene id G286810
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 22335904 ~ 22453567 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU339673
GACATTGCTCACTTTTATTTAGCAGATTTAAATACAATGACCAAGTCTATCTCGGAAGGAAATCATTTCAAACACTAGTTTATGCTATGGTAGAAGAGAGTGAGATACATGGAGGACACAAAGGAACTACTGTTATATGTAAACATCCCAGAGAAATTGAACAAATGCTTGTCAAGGCAttggcagcttttctttttttttttttttttttttttttttttttattttttttttttttttttttattttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU339673 True 260 lncRNA 0.27 4 22335904 22453567

Neighbor

gene id symbol gene type direction distance location
plekha5 plekha5,LOC106609184 coding downstream 246485 21983016 ~ 22089419 (-)
aebp2 aebp2,LOC101464281 coding downstream 355582 21965132 ~ 21980322 (-)
pde3a pde3a coding downstream 403917 21860480 ~ 21931987 (-)
slco1c1 slco1c1,LOC108279430,LOC108435080,LOC107729145,LOC107656392,LOC107590530,LOC107658953 coding downstream 493469 21796905 ~ 21842435 (-)
cog5 cog5,LOC107656447,LOC107583928,LOC107658957 coding downstream 553819 21761681 ~ 21782085 (-)
si:dkey-159a18.1 LOC108279534 coding upstream 43822 22497389 ~ 22523790 (-)
LOC113544588 prr5 coding upstream 176480 22630047 ~ 22659391 (-)
pax4 pax4 coding upstream 217541 22671108 ~ 22683049 (-)
LOC113544635 LOC108279625,LOC108279584,LOC100305028,LOC108279586,LOC108279618,LOC108279585 coding upstream 362268 22815835 ~ 22817249 (-)
LOC113544620 LOC108279584,LOC108279625,LOC100305028,LOC108279618,LOC108279586,LOC108279585 coding upstream 389844 22843411 ~ 22844738 (-)
G286740 NA non-coding downstream 100839 22189319 ~ 22235065 (-)
LOC113544512 NA non-coding downstream 186886 22148273 ~ 22149018 (-)
G286700 NA non-coding downstream 218951 22116597 ~ 22116953 (-)
G286698 NA non-coding downstream 238083 22097608 ~ 22097821 (-)
G286694 NA non-coding downstream 260625 22072211 ~ 22075279 (-)
G286838 NA non-coding upstream 16844 22470411 ~ 22471009 (-)
G286907 NA non-coding upstream 90364 22543931 ~ 22544398 (-)
G286904 NA non-coding upstream 175290 22628857 ~ 22629101 (-)
G287484 NA non-coding upstream 777327 23230894 ~ 23231145 (-)
G287493 NA non-coding upstream 881758 23335325 ~ 23335587 (-)
LOC113544587 NA other downstream 864804 21460826 ~ 21471100 (-)
G285607 NA other downstream 2015854 20313067 ~ 20320050 (-)
rap1b rap1b,LOC106576640,LOC107695907 other downstream 2600672 19678283 ~ 19735232 (-)
LOC113532190 NA other downstream 3588071 18698921 ~ 18747833 (-)
trnae-cuc_38 NA other downstream 4123511 18212322 ~ 18212393 (-)
G286852 irf5,LOC107655585 other upstream 32669 22486236 ~ 22489467 (-)

Expression


Co-expression Network