Gene
RNA
| Item | Value |
|---|---|
| gene id | G287484 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 23230894 ~ 23231145 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU340430 | True | 252 | lncRNA | 0.54 | 1 | 23230894 | 23231145 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pphln1 | LOC108279830 | coding | downstream | 16480 | 23188249 ~ 23214414 (-) |
| cacna1c | cacna1c,LOC108279829,LOC107732972,LOC107590584 | coding | downstream | 48597 | 22900223 ~ 23182297 (-) |
| mrpl42 | NA | coding | downstream | 361096 | 22864496 ~ 22869798 (-) |
| LOC113544620 | LOC108279584,LOC108279625,LOC100305028,LOC108279618,LOC108279586,LOC108279585 | coding | downstream | 386156 | 22843411 ~ 22844738 (-) |
| LOC113544635 | LOC108279625,LOC108279584,LOC100305028,LOC108279586,LOC108279618,LOC108279585 | coding | downstream | 413645 | 22815835 ~ 22817249 (-) |
| G286904 | NA | non-coding | downstream | 601793 | 22628857 ~ 22629101 (-) |
| G286907 | NA | non-coding | downstream | 686496 | 22543931 ~ 22544398 (-) |
| G286838 | NA | non-coding | downstream | 759885 | 22470411 ~ 22471009 (-) |
| G286810 | NA | non-coding | downstream | 777327 | 22335904 ~ 22453567 (-) |
| G286832 | NA | non-coding | downstream | 783465 | 22442050 ~ 22447429 (-) |
| G287493 | NA | non-coding | upstream | 104180 | 23335325 ~ 23335587 (-) |
| G286852 | irf5,LOC107655585 | other | downstream | 741427 | 22486236 ~ 22489467 (-) |
| LOC113544587 | NA | other | downstream | 1759794 | 21460826 ~ 21471100 (-) |
| G285607 | NA | other | downstream | 2910844 | 20313067 ~ 20320050 (-) |
| rap1b | rap1b,LOC106576640,LOC107695907 | other | downstream | 3495662 | 19678283 ~ 19735232 (-) |
| LOC113532190 | NA | other | downstream | 4483061 | 18698921 ~ 18747833 (-) |
