cd36 (cd36)


Basic Information

Item Value
gene id cd36
gene name cd36
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 4044706 ~ 4060514 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026909970.2
TCTCTTTTCTCccctcaccttttttttttctgtttcttttcattgtttttaattattattaatttgatttCTCCTGCATCATGAACCATCTGAAATGCTGCTTCATCGCCGGGAGCGTCATCGGCGCGGTCGCGTGCGCGCTCGGTCTCATCCTCATTCCAGTGGGCGACTCTGTGATCGGGAGCACTGTCAAAAAGGAAGCCGTGTTGGAGGAAGGAACCACGGCGTACGAGAACTGGATCTCGGCCGGCGCGCCGGTGTATCGCCAGTTCTGGCTGTTTGAAGTGCAAAATCCAGACAAAGTGTTGAACGGCAGCATTCCTCAGCTCCAGCAGAAAGGACCGTACACGTACAGGACGAGGTACATCCCCAAAGAGAACGTGACGTTCTACCAGAACCACACCGTGTCCTTCCTGCTGCCGTCAGGAGCCATCTTTGAGCCGAGCATGTCTGTAGGACCAGAGGAGGACGTGGTGACCTCACTGAACCTCGCTGTGGCTggTGTCTACAGTCTGCTAAATCACATGGTGGCTAATATGATGATCCAACTGAGCGGCTCGTCTCTGTTTCAGAAGAGAACCGTGAAGGAGCTGTTATGGGGCTACACAGACCCCATGCTCAAAGTAAAACTGGGAGTTTTTCACCCGTATAACGGAACCTATGATGGACCCTACAGCGTCTTCACAGGCAAAGACGACATCAACAAAGTTTCCACCATCGACTCCTGGAACCTTGAGAAgactCTGTCCTACTGGAACAATACGTACTGTGATATGATCAATGGCACAGaCGGCTCGTCCTTCTCTCCATTCCTGGACAAGAAGACGCCGTTGTACTTCTTCTCCTCAGACATCTGCAGGTCCGTCTCAGCCGAGTTCGATGCCAGTGTGGATTTGAAAGGGATCACAGTGTATCGCTACATGCTGCCATCACAGACCTTCGCCTCTCCCGTGGAGAATCCAGACAACCGGTGCTACTGCACAAACACCCAGACCACCAGGAACTGCACGCTGGCCGGCGTGCTCGACGTCGGAgcgtgtagaggtacTCCTGTGCTCATTTCCCTCCCTCATTTCCTCCATGGCAgtaaggagctgcaggaactcGTTCATGGTCTAAACCCGGACCCTGAGGAACACTCCACCTATCTGGACGTGGAACCGatcacAGGCTTCACACTGAGGTTTGCCAAACGCCTTCAGGTCAACATGATGTACGGCCCATCAAAGGACATCAAgATCCTTAATAAAGTGAAGGAGAACACCGTCTTCCCCATCCTGTGGTTAAATGAGacGGCGGCACTCGATGATGACACAGCACAGAGGATTAAGGCGGAGCTCTTCTCCCGGATCGACACTCTGGAGACGGTGCAGATCGCTCTGATATCAGCCGGAGCGGTGATGTTGGTGCTGTGTCtgattggagtgtgtgtggtgaaccACCGGAGTCGCTTATCGTTCATAGCGTAAAGCGTAACGTGTTTACACGCTAATCATTTCTGATTAACGTCAGGACTGTAGCAAACGCTCCAGCTCAGGAAACTACATGACGCTGAAGTACGGCAACACTAATGGGACAAATACTCAACTATACTACACCACTAGGGGGTGCTGGAGGGTCAGGACAAACTTTACGGAAAATTTGTACGTTAATGCAACACGTATACGCACTTGCTTTCAGTAaatactttacattttatttaaacacctATAAAGTAAAAACgcaaaaatttaatttttttcaaatttagcGAATTAGCCGAGACACGTTTAGTGTGTGAagtctttagttttgcactggagctaacAGGCTAATGGAGAacgtagctaacaagtaaggaaagctttatagctaccagtttaacGTTAATCAAActgaatcactttcttcctgAACACATAGAAGGGATAATaaaatttgataataaaatttcatttgtgtgtttaattctGCTATTGTACTATTAGGTTTAAATCTAATGTGTGtcagcgagtgtgtgatgatttagccGTGCAgcttgcacaatgctaaactggtggctataatCTTACATTTAGCTCCAGTGCGAAAGGAAAGAAGTGACATTTTGGATAAATAGTTCCTTTAATGCGGTATTTTTTATAGTATACGTTTATAGTACTTATTCAGTACTGTAACGAATTAATTCTTTTaagaataaatattataaaataagttttattCCAGTTTGCGACCAATAAAAggaagaatgtaaaaaaaaa

Function

symbol description
cd36 Predicted to enable low-density lipoprotein particle binding activity; low-density lipoprotein particle receptor activity; and scavenger receptor activity. Acts upstream of or within several processes, including defense response to bacterium; response to prostaglandin; and response to vitamin B3. Located in plasma membrane. Is expressed in several structures, including blastoderm; blastodisc; digestive system; pleuroperitoneal region; and taste bud. Human ortholog(s) of this gene implicated in several diseases, including blood platelet disease (multiple); hemolytic-uremic syndrome; osteoarthritis; pulmonary tuberculosis; and type 2 diabetes mellitus. Orthologous to human CD36 (CD36 molecule).

NR:

description
PREDICTED: platelet glycoprotein 4

GO:

id name namespace
GO:0034694 response to prostaglandin biological_process
GO:0033552 response to vitamin B3 biological_process
GO:0007155 cell adhesion biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06259 CD36; CD36 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026909970.2 True 2240 mRNA 0.46 12 4044706 4060514

Neighbor

gene id symbol gene type direction distance location
kdm7aa kdm7a coding downstream 99405 3919302 ~ 3945301 (-)
kmt2e kmt2e coding downstream 138053 3857515 ~ 3906653 (-)
orc5 orc5 coding downstream 233090 3798341 ~ 3811616 (-)
hcls1 LOC108279643,LOC107095911,LOC105918344,LOC103358095,LOC102201149,LOC102292035,LOC101481917 coding downstream 288849 3738884 ~ 3755857 (-)
ppfia2 ppfia2,LOC107680027,LOC107694182 coding downstream 353020 3545076 ~ 3691686 (-)
psmc2 psmc2,LOC103382982 coding upstream 723614 4784128 ~ 4792797 (-)
gys2 gys2,LOC107659841,LOC107694689 coding upstream 836756 4897270 ~ 4917780 (-)
ldhba ldhb,ldhba,LOC107659842,LOC107589975,LOC107725606,LOC107586539,LOC107744904,LOC107694687 coding upstream 865202 4925716 ~ 4938813 (-)
slc25a3a slc25a3a,slc25a3,LOC108279629,LOC108437945,LOC107732290 coding upstream 893777 4954291 ~ 4965093 (-)
strap strap,LOC107744907,LOC107586834,LOC107725662,LOC107694684 coding upstream 927967 4988481 ~ 5003791 (-)
G276395 NA non-coding downstream 2185 3968695 ~ 4042521 (-)
G276388 NA non-coding downstream 128589 3915328 ~ 3916117 (-)
G276387 NA non-coding downstream 130717 3913539 ~ 3913989 (-)
G276384 NA non-coding downstream 139775 3901262 ~ 3904931 (-)
G276342 lhfpl3 non-coding downstream 229341 3802393 ~ 3815365 (-)
G276420 NA non-coding upstream 9934 4070448 ~ 4142948 (-)
G276447 NA non-coding upstream 63951 4124465 ~ 4125581 (-)
G276497 NA non-coding upstream 194686 4255200 ~ 4255944 (-)
G276515 NA non-coding upstream 217545 4278059 ~ 4322681 (-)
G276538 NA non-coding upstream 248074 4308588 ~ 4309037 (-)
golgb1 LOC108279640 other downstream 215304 3759211 ~ 3829402 (-)
G276340 NA other downstream 307629 3736130 ~ 3737077 (-)
G276075 NA other downstream 505963 3536997 ~ 3538743 (-)
lin7a lin7a other downstream 550690 3430190 ~ 3494016 (-)
rps16 rps16 other downstream 659783 3299257 ~ 3384923 (-)
G276421 NA other upstream 21764 4082278 ~ 4091863 (-)
G276530 slc35e3,LOC107556774,LOC107710682 other upstream 237346 4297860 ~ 4300524 (-)
LOC113523868 NA other upstream 270746 4331260 ~ 4343545 (-)
LOC117599555 LOC108279645 other upstream 297025 4357539 ~ 4457121 (-)
G276503 LOC108279645 other upstream 298111 4358625 ~ 4587096 (-)

Expression


Co-expression Network