mapk11 (mapk11,LOC108279456,LOC103035641,LOC108442323,LOC107725929,LOC107656380,LOC107583972,LOC107579565,LOC105020226,LOC107658913)


Basic Information

Item Value
gene id mapk11
gene name mapk11,LOC108279456,LOC103035641,LOC108442323,LOC107725929,LOC107656380,LOC107583972,LOC107579565,LOC105020226,LOC107658913
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 12375791 ~ 12394521 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923092.2
CCCACACACCACCAGACGGAGCCTCCCATTCTGGTAAACTGCGAGCACAAACAGAGGCGCTGGGCTATTTCATCTGTGCAGACTGTGTAGTCGAAAAGGCGAATATTGCAGCTGAAAACAGGACAGCCTTTTCTGGGTTTATTAGTGATCATGTCAGCCAGACCGGGATTCTATCGCCAGGAGCTCAACAAGACAGTATGGGAGGTGCCCGAGCGCTACCAGATCCTCACGCCGGTCGGCTCGGGCGCGTACGGCTCCGTGTGTTCGGCCTATGATGTACAGCTTCGTCAGAAGGTAGCCATTAAGAAGCTCTCGCGGCCATTTCAGTCTCTCATTCACAGTCGGCGCACCTACAGAGAACTGCGATTGCTCAAGCACATGAAACACGAGAATGTTATTGGGTTGCTAGATGTTTTCTCTCCTGCAGCATCACTAGAAGAATTCAATGAGGTCTATCTTGTCACTAATCTAATGGGAGCAGACCTCAACAACATAGTCAAGTTTCAACGCCTTTCAGATGAGCATGTGCAGTTCCTCATTTATCAGTTACTTCGTGGCCTTAAGTACATCCATTCAGCTGGACTAATACACAGAGATCTAAAGCCAAGCAATGTAGCTGTGAATGAAGACTGTGAACTCAGGATCCTGGATTTCGGATTGGCCAGGCAGACTGATGATGAGATGACTGGGTATGTGGCAACACGCTGGTACAGAGCGCCTGAAATTATGCTCAACTGGATGCATTATAATCAGACAGtggaTATCTGGTCTGTGGGATGCATTATGGGTGAGCTTATCAAAGGGAAGGTCTTGTTTCCAGGAAATGACTATATAGATCAGCTGAAGAGAATCATGGAGGTGGTTGGTACCCCAACTCCTGACCTTCTTAAGAAGATCTCTTCAGAGCATGCCCAGAAATACATCCAGTCTCTTCCCTACATGCCCCAGCAGGATCTGGGGAAGATATTCAGAGGAGCCAATCCACACGCGGTAGATTTGCTGAAGAAAATGTTGGTGTTAGACTGCGACAGGCGGATCTCTGCCACTGAAGCCCTGTCCCACCCTTATTTCTCTCAGTACCATGATCCTGAAGATGAGCCTGAGGCACCACTATATGACCAAACCCCCGAGAGCAAGGACCGCACGCTGGAGGAATGGAAGGAACTGGTGTTTGAGGAAGTTAACAGTTTTAAAGCCCCTGTCAACCAAACAGACAGCCTCCAGGCCGAGCAGTAACAGTTACTGTTCAACATTCCAAACCTGAGTCTAACCAACTACCCAAGAAGGACAAATACTGTTGATTTGTCTCTCATTCGACTCAAGACTGAGGATCTGAGGACCTGCCGGTTAGGCAACTGGAAAATGAGAACAGTGCATTCCATAGGCTTAAaggcctttgtgtgtgtgtgtgtgtgtgtgtgttatatactTATGAATGCCAGAAAGTAATATGTCTCTGCTTTCTAGGACACATTATAGACTCCTACATGCACAACCAATATATTATTATAGGAagcatgttgtgtttttattgtacttttttattacAAGGACAATACAAGAAATGTGGAGCAAAATATGGATGTCAATCAAACCAAGGTGAAGAGGAGAAGGTCAGCCTGATATCTACATGTTTACAGAGAAGGATTGACTGAAAggcattaatattaactttaTGTAATAAAAGACTTGGATGAAGGATGAATTTTGGCATTATGAAGTTATGAGTGTGGTTCAAAATACGAAAACAGCACAGTTAGTGTTACATTATTCACAGTATTGGTTTGTTGCGCCAAAGACTAAAGGAAACCAAAATACTTACAAGTATACATatagatgggtgacaaattaaaagaaaaactgttgACTGTTATGCTGTGAAGGCAATTTGCTAGCATGGTTTGTGTTCATTTGCCTCCTTGGAGGGAAGAGTCAATGGAAATTATTACAAAGCTCTTCTGACAGATcacatgatgaaatatttctatcctgatgttggtggtctcttccaggattgCGTTGCTCCCATCCACAGGGAGCGAGAGCTCACTGTATGATTTGATGAGTGTGAAAATGACGTGaatcatatgctatgacctTAACCTTAACCAGATCTGAACCTATGAGAGAATTTTGACAAATGTGTTTGATAGCGTTCTTAACCACCATTACCAAAACACCAACTATGGGAATATCTTTTGAGGAACAATGTTCAACATCTCCAGTACAGTACCAGACACTTGTAGAAtagtttttttcctccacttgTATACCTGTAGCTCTGTTTCCATTCTTTTGTTAACCTCTGGCATTTTATGTGTCTATCATTTACagtatgtattgtatgtatgcatacacatacatatagttaagtgcaaaagtttgcatttccttaatttgaaatgaaaccaaCAGTCAAAAAGTTAATGTTAAGATATTACTAGTTAACAAAATTCTATTTCTGAATGTGATCTAAATGTGGATGCTATTCCATATATCTCTAAAGACTTCTTCAGTTCTCCTGTTGTTTACTTTGAATCtctctgagtttttttttttttatttatttcatcatcTACCCTTTGTATAGTATAGTTACTTCTGTAAAAGGTCAATCTTTTGTTTTAGGTCTTGTAAAAGCTCTTTTCTTGATGCCAGTGACCCAGCTGCTTACAGCAAACAGCTTACAAATAAGTGTGTTTGAAATGCTCATGCCTCACATAAGACTTGTTGAAAGTAAACACGTGGTTGAAGTCTTTAGACACATTAATGAGgcagatttaaataaatgaacttaAGAGTGACACGGGGACGTGATATACTGTAACATACAGCATGTCTAAATGTGGTAATATCTCACTATTCAAGATCTTCTTTATATCATTTAAAACAATTGATTATAATATGGACATCTTATATACCTCAGTTgcttctgtgagtgtgtgaatatgaaatGTCTGACTTGAAAGTGATACATGTTTTGTGTTGAgatgttttatgttgtttttaatagCTGTTCTTCCACTGACTGAACCACCAGTTATTAGAGAAATGGATAACTACAGTTGGTTTGCACTGCACTGGTTTAACCTACAGTTATGAATTCTTTAGACCTCAAacctttttgtaaaataaatgaataa
>XM_034313232.1
CCCACACACCACCAGACGGAGCCTCCCATTCTGGTAAACTGCGAGCACAAACAGAGGCGCTGGGCTATTTCATCTGTGCAGACTGTGTAGTCGAAAAGGCGAATATTGCAGCTGAAAACAGGACAGCCTTTTCTGGGTTTATTAGTGATCATGTCAGCCAGACCGGGATTCTATCGCCAGGAGCTCAACAAGACAGTATGGGAGGTGCCCGAGCGCTACCAGATCCTCACGCCGGTCGGCTCGGGCGCGTACGGCTCCGTGTGGTTATTGGGTTGCTAGATGTTTTCTCTCCTGCAGCATCACTAGAAGAATTCAATGAGGTCTATCTTGTCACTAATCTAATGGGAGCAGACCTCAACAACATAGTCAAGTTTCAACGCCTTTCAGATGAGCATGTGCAGTTCCTCATTTATCAGTTACTTCGTGGCCTTAAGTACATCCATTCAGCTGGACTAATACACAGAGATCTAAAGCCAAGCAATGTAGCTGTGAATGAAGACTGTGAACTCAGGATCCTGGATTTCGGATTGGCCAGGCAGACTGATGATGAGATGACTGGGTATGTGGCAACACGCTGGTACAGAGCGCCTGAAATTATGCTCAACTGGATGCATTATAATCAGACAGtggaTATCTGGTCTGTGGGATGCATTATGGGTGAGCTTATCAAAGGGAAGGTCTTGTTTCCAGGAAATGACTATATAGATCAGCTGAAGAGAATCATGGAGGTGGTTGGTACCCCAACTCCTGACCTTCTTAAGAAGATCTCTTCAGAGCATGCCCAGAAATACATCCAGTCTCTTCCCTACATGCCCCAGCAGGATCTGGGGAAGATATTCAGAGGAGCCAATCCACACGCGGTAGATTTGCTGAAGAAAATGTTGGTGTTAGACTGCGACAGGCGGATCTCTGCCACTGAAGCCCTGTCCCACCCTTATTTCTCTCAGTACCATGATCCTGAAGATGAGCCTGAGGCACCACTATATGACCAAACCCCCGAGAGCAAGGACCGCACGCTGGAGGAATGGAAGGAACTGGTGTTTGAGGAAGTTAACAGTTTTAAAGCCCCTGTCAACCAAACAGACAGCCTCCAGGCCGAGCAGTAACAGTTACTGTTCAACATTCCAAACCTGAGTCTAACCAACTACCCAAGAAGGACAAATACTGTTGATTTGTCTCTCATTCGACTCAAGACTGAGGATCTGAGGACCTGCCGGTTAGGCAACTGGAAAATGAGAACAGTGCATTCCATAGGCTTAAaggcctttgtgtgtgtgtgtgtgtgtgtgtgttatatactTATGAATGCCAGAAAGTAATATGTCTCTGCTTTCTAGGACACATTATAGACTCCTACATGCACAACCAATATATTATTATAGGAagcatgttgtgtttttattgtacttttttattacAAGGACAATACAAGAAATGTGGAGCAAAATATGGATGTCAATCAAACCAAGGTGAAGAGGAGAAGGTCAGCCTGATATCTACATGTTTACAGAGAAGGATTGACTGAAAggcattaatattaactttaTGTAATAAAAGACTTGGATGAAGGATGAATTTTGGCATTATGAAGTTATGAGTGTGGTTCAAAATACGAAAACAGCACAGTTAGTGTTACATTATTCACAGTATTGGTTTGTTGCGCCAAAGACTAAAGGAAACCAAAATACTTACAAGTATACATatagatgggtgacaaattaaaagaaaaactgttgACTGTTATGCTGTGAAGGCAATTTGCTAGCATGGTTTGTGTTCATTTGCCTCCTTGGAGGGAAGAGTCAATGGAAATTATTACAAAGCTCTTCTGACAGATcacatgatgaaatatttctatcctgatgttggtggtctcttccaggattgCGTTGCTCCCATCCACAGGGAGCGAGAGCTCACTGTATGATTTGATGAGTGTGAAAATGACGTGaatcatatgctatgacctTAACCTTAACCAGATCTGAACCTATGAGAGAATTTTGACAAATGTGTTTGATAGCGTTCTTAACCACCATTACCAAAACACCAACTATGGGAATATCTTTTGAGGAACAATGTTCAACATCTCCAGTACAGTACCAGACACTTGTAGAAtagtttttttcctccacttgTATACCTGTAGCTCTGTTTCCATTCTTTTGTTAACCTCTGGCATTTTATGTGTCTATCATTTACagtatgtattgtatgtatgcatacacatacatatagttaagtgcaaaagtttgcatttccttaatttgaaatgaaaccaaCAGTCAAAAAGTTAATGTTAAGATATTACTAGTTAACAAAATTCTATTTCTGAATGTGATCTAAATGTGGATGCTATTCCATATATCTCTAAAGACTTCTTCAGTTCTCCTGTTGTTTACTTTGAATCtctctgagtttttttttttttatttatttcatcatcTACCCTTTGTATAGTATAGTTACTTCTGTAAAAGGTCAATCTTTTGTTTTAGGTCTTGTAAAAGCTCTTTTCTTGATGCCAGTGACCCAGCTGCTTACAGCAAACAGCTTACAAATAAGTGTGTTTGAAATGCTCATGCCTCACATAAGACTTGTTGAAAGTAAACACGTGGTTGAAGTCTTTAGACACATTAATGAGgcagatttaaataaatgaacttaAGAGTGACACGGGGACGTGATATACTGTAACATACAGCATGTCTAAATGTGGTAATATCTCACTATTCAAGATCTTCTTTATATCATTTAAAACAATTGATTATAATATGGACATCTTATATACCTCAGTTgcttctgtgagtgtgtgaatatgaaatGTCTGACTTGAAAGTGATACATGTTTTGTGTTGAgatgttttatgttgtttttaatagCTGTTCTTCCACTGACTGAACCACCAGTTATTAGAGAAATGGATAACTACAGTTGGTTTGCACTGCACTGGTTTAACCTACAGTTATGAATTCTTTAGACCTCAAacctttttgtaaaataaatgaataa

Function

symbol description
mapk11 Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in granule cell. Orthologous to human MAPK11 (mitogen-activated protein kinase 11).

NR:

description
PREDICTED: mitogen-activated protein kinase 11

GO:

id name namespace
GO:0000165 MAPK cascade biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K04441 P38; p38 MAP kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923092.2 True 3143 mRNA 0.40 12 12375791 12394521
XM_034313232.1 False 3013 mRNA 0.40 11 12375791 12394521

Neighbor

gene id symbol gene type direction distance location
mapk12b mapk12b,LOC108279513,LOC108442322,LOC103035956,LOC107579544,LOC107656379,LOC103459704,LOC107710136,LOC103151778 coding downstream 1407 12369609 ~ 12374384 (-)
LOC113532409 NA coding downstream 8245 12363808 ~ 12367546 (-)
zgc:165507 slc16a7,LOC106609446,LOC103152572 coding downstream 103164 12254255 ~ 12272627 (-)
LOC113532307 LOC108279675 coding downstream 253020 12110243 ~ 12122771 (-)
LOC113532368 NA coding downstream 267129 12097521 ~ 12108662 (-)
LOC113531803 NA coding upstream 7658 12402179 ~ 12409530 (-)
LOC113532240 NA coding upstream 17338 12411859 ~ 12415074 (-)
apex1 apex1,LOC107658891 coding upstream 35927 12430448 ~ 12435191 (-)
si:ch211-214j24.10 LOC108279797 coding upstream 51377 12445898 ~ 12451585 (-)
shisal1a LOC108279994,LOC108442307,LOC107725687,LOC107676911,LOC107583751 coding upstream 93874 12488395 ~ 12517683 (-)
G281486 NA non-coding downstream 6526 12368959 ~ 12369265 (-)
G281455 NA non-coding downstream 121636 12251314 ~ 12254155 (-)
G281373 NA non-coding downstream 281732 12093857 ~ 12094059 (-)
G281362 NA non-coding downstream 339429 12033096 ~ 12036362 (-)
G281102 lrp6,LOC102306404,LOC101476287 non-coding downstream 664807 11707690 ~ 11710984 (-)
G281510 LOC108279795,LOC108442313 non-coding upstream 63042 12457563 ~ 12459092 (-)
G281527 NA non-coding upstream 81743 12476264 ~ 12477629 (-)
LOC113532391 NA non-coding upstream 751761 13146282 ~ 13147358 (-)
G281964 NA non-coding upstream 774154 13168675 ~ 13210493 (-)
G281981 NA non-coding upstream 864631 13259152 ~ 13285718 (-)
dusp16 dusp16 other downstream 622878 11721063 ~ 11752913 (-)
G281092 mansc1 other downstream 715464 11657890 ~ 11660327 (-)
G281074 rad51ap1 other downstream 787767 11586304 ~ 11588024 (-)
vegfab vegfa,LOC108435123 other downstream 1116379 11238935 ~ 11259412 (-)
sobpb LOC108279441 other downstream 1281615 11079168 ~ 11094176 (-)
LOC113531972 muc19,LOC108280038 other upstream 2745404 15139925 ~ 15184075 (-)
alg12 alg12 other upstream 4006400 16400921 ~ 16406863 (-)
LOC113532230 LOC108280029,LOC107562148,LOC107687569,LOC107741714,LOC105912408 other upstream 4444014 16838535 ~ 16853395 (-)
phf21b phf21b other upstream 4563991 16958512 ~ 17027865 (-)
LOC113532261 smkr1 other upstream 5584242 17978763 ~ 17988280 (-)

Expression


Co-expression Network