mpped1 (mpped1,LOC107726058,LOC107658834,LOC107592234,LOC107656320)


Basic Information

Item Value
gene id mpped1
gene name mpped1,LOC107726058,LOC107658834,LOC107592234,LOC107656320
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 7643447 ~ 7690136 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923401.2
tttttttttttggaaagtcaGCTGTTTCAGCCGTCTTCAGCCCTTCAGGATCCAGGTGTGTGTACCTCTCAGTCGAGCTGGATCTCTTGGCATCATGATGGTTCACAGTGCCAGCACGGGGGCTACTGAACACTGAGCCTCATCTGCTTCTCATCTCAGTTCACCAGTGCAAGTGATCTCAGCTCCACTCACACTCAGCCAGCCAGCACGGAGTcgctctgagtgtgtgtgtgtgcgtgtgtgtgtttgtgtgtgtgtgtgtgtttgctggcATGGCATTTACATTGTCGGAGATCATGGCTGCACGAAGGCAGCAGCAGTCTCAAAGAGGAGCGAGAGGAGCAGTGGAAGTAGACGAGTACAGTGCAAACCCCACTCAGGCCTTCACCTTCTACAACATTAACCAGGGACGCTTCCAGCCACCCCACGTCCATATggTTGATCCATTACCCCATGACACCCCTAAGCCACCAGGCTACACTCGCTTTGTGTGTATCTCGGACACACACTCGCGCACGGACTCTATTCAGATGCCGTACGGCGATGTGTTACTGCACGCAGGAGACTTCACTGAGCTTGGCTTGCCCAGCGAAGTCAAGAAATTCAACAACTGGCTCGGCACCCTACCTTACGAGATAAAGATTGTGATAGCAGGAAACCACGAGCTGACTTTCGATCAGGAGTTCATGGCCGATCTGATCAAGCAGGACTTCTATTACTTTCCCTCCGCCTCCAAGCTGAAGCCTGAGAACTATGAGAACGTGCAGTCGCTGCTCACCAACTGCATCTACCTGCAGGACTCTGATGTTACCGTCAGAGGTTTCCGCATCTACGGTTCACCATGGCAGCCGTGGTACTACGGCTGGGGTTTTAATCTTCCACGAGGGCAAGCACTGCTGGACAAGTGGAACCAGATCCCCGACTCCACTGACATCCTGCTCACACACTGCCCTCCTCTGGgTTTTTTAGACTGGGTGCCGAGGAAAATGCAGCGTGTTGGCTGCATGGAGCTGCTGAACACAGTGCAGAGAAGAGTCCAACCCAAATTACACGTCTTTGGACACATACATGAAGgtTATGGCATGATGACCGATGGAACCACTACGTTTGTTAATGCCTCTGCCTGCACAGTCAACTTCCAACCCATGAACCCGCCCATCGTCTTTGATCTGCCCAATCCCAGGAGCTCGTGATTGAACTTGGCCCCGCCTCACGCCTCCCAAAATCAGGGTTAATTTTTAAGTGTATTTGGGTGCTGTTTTGTGTACatattacagagagagagagagagagagagactactCTGGAAGATTTGAATCTGTTGTTGTGCCATGTTCTGTTCTCGAATCCTGACTTTGCTACTGCCTCATTTTCCGAGTGATTCTCACGCTTTCATTGCACTTGAAATGTTGTGACAATCCCTCTTGTCTGTTAATGGTGGACACACACTGGAACAACCATCATATGGACTACGTGAGACACAAAACTCTGGAAGCCCATAAGAATGTCTGAGCTTTTAATTACTTCACACCGGAGAAGGTTTAAAAGGCCCGTGTGCTGATTGGATGTAATCTGACGTGATCTGATCTGATGGACGTGTCCATTTCCAGCCTTGTTGTTCCCGCTCGAGTTCTTCAGTGCTGTACAGAGAGGACCTCTCATCAGGGTTTGGACTCCAAATCAGACACTGAAAATATAATGTACAGTTGCTGTTGTACAAGAAATTCTCCATTTTTATGCTTCcgttatttgttttattgtaaaacgTGTGATGTGAGTGAGTCTGTAACACACTGTccttaattaaatcattttaaagaatcTTTAACCATGACATTTCTTTCAAAGTGCTGATTAGAAGTCATTaagatattttaatttacattttttaagtgCTTCTCATCTGAAAATGCTCAAAGTGCACTTTTTGCCTATCAAGTATATGTTACTCTACATGTTCGCACCTATAATTTTTCTAACGTTCCTCCTAGCAGTTGTTCATTTTCATGTGTTTGGCTGGTCTGATTATGGTTATTGTTATattcataattaaataaagtggtcttttgttttgtcttttttttacgTGGATGAATAAGTGTATGAATCAGATGAGCATGTGTGAGAGAGCATCAAGTCAAAAAAGCTCTTCTAATGGCCAGAAAGGAAAATGTAGGACTCTAGattgaagaaagaaaatgacagagaACAGCATTTGGATGATTATATAAAGGCTTGGAGTCTGAATTGGTGTGCCATATTGGTTTTttttaccacagtgctgttgaattcttgaatctgattggtcgtttctatagtaacaacttacacagggacttgtatgatggacgttctacataaatgaatg

Function

symbol description
mpped1 Predicted to enable hydrolase activity. Is expressed in Purkinje cell. Orthologous to human MPPED1 (metallophosphoesterase domain containing 1).

NR:

description
metallophosphoesterase domain-containing protein 1-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923401.2 True 2368 mRNA 0.45 7 7643447 7690136

Neighbor

gene id symbol gene type direction distance location
trnal-aag_11 NA coding downstream 49639 7593727 ~ 7593808 (-)
pnpla3 LOC108279447,LOC108428138 coding downstream 51407 7560149 ~ 7592040 (-)
ttll12 ttll12,LOC107581273 coding downstream 83331 7539924 ~ 7560116 (-)
LOC113531701 NA coding downstream 115504 7510088 ~ 7527943 (-)
optn optn coding downstream 239940 7391215 ~ 7403507 (-)
scube1 scube1,LOC107592233,LOC107726032 coding upstream 10896 7701032 ~ 7786479 (-)
c18h12orf45 c19h12orf45 coding upstream 136153 7826289 ~ 7830138 (-)
chst11 chst11,LOC107580584,LOC107656313,LOC107743617,LOC107592229 coding upstream 181608 7871744 ~ 7924698 (-)
LOC113531950 NA coding upstream 242837 7932973 ~ 7936791 (-)
hcfc2 hcfc2 coding upstream 256274 7946410 ~ 7956609 (-)
LOC117599592 NA non-coding downstream 109165 7530784 ~ 7534282 (-)
G278312 NA non-coding downstream 147184 7495572 ~ 7496263 (-)
LOC117599447 NA non-coding downstream 227376 7414348 ~ 7416071 (-)
G278275 NA non-coding downstream 414007 7229005 ~ 7229440 (-)
G278265 NA non-coding downstream 568862 7071746 ~ 7074585 (-)
G278520 NA non-coding upstream 106699 7796835 ~ 7879017 (-)
G278911 NA non-coding upstream 526877 8217013 ~ 8217293 (-)
G278920 NA non-coding upstream 548838 8238974 ~ 8239676 (-)
G278963 NA non-coding upstream 699362 8389498 ~ 8390559 (-)
G279064 NA non-coding upstream 921982 8612118 ~ 8612342 (-)
camk1da camk1da,LOC108279878,LOC108428135,LOC107743755,LOC107658855,LOC107726013,LOC107656221 other downstream 143368 7421988 ~ 7500079 (-)
copg2 copg2,LOC108279806,LOC102787195,LOC107744880,LOC107676915 other downstream 1638318 5981138 ~ 6005129 (-)
G277575 copg2,LOC108279806,LOC102787195 other downstream 1658883 5982292 ~ 5984564 (-)
tmpoa LOC108279628 other downstream 2659132 4966232 ~ 4984315 (-)
G276650 LOC108279602 other downstream 2904448 4734931 ~ 4738999 (-)
avpr1ab LOC108279517 other upstream 276683 7966819 ~ 7970571 (-)
G278634 NA other upstream 362952 8053088 ~ 8068077 (-)
G278912 NA other upstream 528425 8218561 ~ 8219680 (-)
G279415 NA other upstream 1517215 9207351 ~ 9208563 (-)
cracr2ab LOC108280118 other upstream 2188345 9878481 ~ 9892386 (-)

Expression


Co-expression Network