gpr19 (gpr19,LOC107707975,LOC107710070,LOC107658992,LOC107662212)


Basic Information

Item Value
gene id gpr19
gene name gpr19,LOC107707975,LOC107710070,LOC107658992,LOC107662212
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 11760781 ~ 11768919 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923545.2
tgtgtagacacacacacacacacacacacacacacacacacacacacactcctgtctctCGGATTTGGCGGCAGCGCGAGCGCGTTGGAGCTACCAAACACCATTGAAACGACCTCACGTCCTCCAAAAACCCTCATTTTCGATTAAGCACTGATTTCGTTTGCTCgataaaaaaaggaagaaaaagaaaacagctgcaggaaaatgagatgaagtCGGGCGGTTTCTTGGCACGGGGGGGATTTCTGAGGATGCTGCGCGAGCGAGGAGGAATCGGTTACAGTAACGGTAACGGGCACGGCTCAGGGATGTGTGAAGCTAAAAACGAGAAAGCTCTTTCCACGAGGTGAGGTCTGACTTACCACGGCTACAGAAATGGTGTACGCTTTGCCGATGGACGCTGTGAAGCCGTCTCTGCACACGACACTCCTGACATACCTGATGCCGAACAATTCGGAGAGGGACAATGTGTCGACTCTGCCAGCCAGTTTACCCACACCTGTCTGCAATCTGGATACATCCTCGTTCCAACCTAACAGCACGCAGGTGTCCTACGAGCTCACTCCAGCAGAAGTGACCATTCTCGGGCTGATCTTTGGAGTCTTTTGGCTAGTCTCAGTTCTAGGGAATGCTTTGGTGTGCCTGGTGATACACCGCAGCCGCAGAACTCAGTCGACCACGAATTACTTTGTGGTGTCTATGGCTTGTGCTGATTTGCTGCTGAGCCTGGGCTGCGCTCCATTTGTTCTGCTCCAGGTCTCATCCGGGTATTGGCCCCTGAGTACGGCGGCCTGCAAGGCAGTGCGGTACATCCAGCACTTGTGCCCTGGCGTGCAGGTCTATGTGCTCCTTTCCATCTGTGTGGATCGCTTCTACACGATTGTGTATCCACTGAGCTTCAAAGTGTCTCGGGAGAAGGCGAAACGCATGATCCTGGCTTCTTGGCTCTTTGACGCAGCCTTCGTCTCCCCGTGCCTCTTTTTCTATGGATCTTCTTCGTCAATTGCGCAAAGACACTGTGAATTTTTCCTTCCAGGATCTTGGGATGGTCTGGCCTACGCTCTCACTCACCTCCTGTTTGGTTTCCTGGTTCCAGCACTTCTTATCTTATCCTTCTACCAGAGGGTAGTGCGCTACATCTGGCGGATTAGTGCGGACGGACGCACGGTGCGCAGGACTATGAACATTGTACCCAGAACAAAAGTAAAAACCATCAAGATGTTCCTGATGCTCAACACTGTGTTCCTCCTCACATGGATGCCTTTTTACGTAGCACAGCTTTGGCATCCTGATGTATCCGCTGGCCCCAACAGGCAGGGGGCGCTGTTCTTTGTTGCAATCGCATGGATGTCGTTCAGCTCCACTGCTTCTAAGCCAACGCTCTACTCGGTGTACAACGCCAATTTCAGACgaggaatgagagagacatTCTGCATGTCATCGATGAAGTGCTACCGGAGCAACGCGTACACCATCACCGCCAGTTCACGgatagctaaaaaaaattacgTGGGTGTTGTAGACTTGCCAGTGCCGCCAAAAACTCTGATCAAAGATTCCGTTTATGACACTTTTGACCGagaagcaaaagagaaaaaactggCATGGCCTATAAGTGTCAACCCACCAAACACATTTGTATAGAATGGCATAGTGACATGTCTGTCCAAATGTACTCAAAGGTGCTCGGGTTCACATTTTTTTGGAACACACCTAGCATCGAGAACTGAAAGTGCTATACCTATTGTTATTCTAACTGAAACAGACAAGCAGGACAAAAGCAACAAGTTGCTCAGTTTAACTGACAGTAGCCAGGTGTCTAGCTCATGCGTTCGTGAGAAGTACTTTTGTGTCATTTCTGTCTGTAGTATGTTACGTAATGTTAAATTCTTGTATTTTGTTTCTTGTGATCATAAATGTCGTGATGCAAAACGAAACCGTCAGGTTGGAAGACACTTGTTGAGAGAAAGCAATTGTGAGTCTATCTTATCTATATGTCCATGCAGTTTAGATTTGTTCTATGGGTTTGTGAGAGGAATGTCATCTACACTGCAATCGATGGATGGGCTTTCTCACGATACTACTGCTGTGATGATGCTTTTGTTTATTACCATAGAGTGTTAATTTCTGTAGGAAACATGTCCTGTTCCAGCAAATGTCCAAAACTGTGTTGCATTAACAATGATgagcaaagaataaaaaaaagaatcagttGCATATCAAATACAGGCTCAATTTCTTAATGTTTTAGTAGCGGCCTTCTGTGAAAATCACTGTAGAGCAGATGGCATTGTTTCTGCTTTATTGGTGGCAAACAGTGTTAAAAAGATATGGCTCCATTACACAACgaataataaaatgtacttcAATATGAACACCATTAGTGTCTAAATGAACAGTGTGACATTTCCAGCATTAACTTTCCATGCTTTTGGGTTGTTTGATATTAGTTTCATTGTCTGTCTGAGAACAAAAcctcaaatgaaatgaaattcaaCAAAAGACATTTAaccaaatgatgtaaaatctTTCACTGTAAAATCTACTGTCATTAAGCAAGACATAAAATTACCTAAAACATCAATTAACTATGGAAGTTTGGAAAGGCCACAAGGTTTCTTGAGATCATGACTTATTTTCCTCATGATGTCGAAATGCATGATTAGGCATACATGCCTACATACATGATACGGATGAGCGTGTCTGTTTTTAGTTTAATCAGCAACTGATCCAAGAGGAAATAGCTGTATGTTTATCAGAGCTAGACAATTTCCGTCACTTGAGAAGGCCACTCTGCACCTGTACCGTCACGGACACGACAGTGATCCTGAACAGATGATCAGTTTCACTGCCAGATAACTTGAGGGACCGGTATGTCTCCACGGTTGCCACATGATGTTTGAGAGATGCCACCTAAATGGTTTGCGGTTCAGGACATTTTCTTCCACCTTCTTCAAAATCTTCGGAAATAGGATGTAAATACTGCAGAATCTCAGAAAAGCACTTTTGTTATCTTGAGCTCATGAGAAAAAGAGCTCATGCAAACTTGTGATAAATTATGAACAATGAATAAGttggaaaaatagaaataacTGATAGCTTTTCTGGACTACCGTAATCAACAGAATGTGCTGGGTAAATTGAGTATGCTGACAAATTTAAAATAGGCACATCACTGACTTAAATAGTCAGGAGCACTGAATCAAAACTTCATAACCACTGACAAACCCAGCAGAGGAAAGAAATCTTATTAAATGTTTACGCTAAG
>XM_026923546.2
CtgtgtagacacacacacacacacacacacacacacacacacacacacactcctgtctctCGGATTTGGCGGCAGCGCGAGCGCGTTGGAGCTACCAAACACCATTGAAACGACCTCACGTCCTCCAAAAACCCTCATTTTCGATTAAGCACTGATTTCGTTTGCTCgataaaaaaaggaagaaaaagaaaacagctgcaggaaaatgagatgaagtCGGGCGGTTTCTTGGCACGGGGGGGATTTCTGAGGATGCTGCGCGAGCGAGGAGGAATCGGTTACAGTAACGGTAACGGGCACGGCTCAGGGATGTGTGAAGCTAAAAACGAGAAAGCTCTTTCCACGAGGTCTGACTTACCACGGCTACAGAAATGGTGTACGCTTTGCCGATGGACGCTGTGAAGCCGTCTCTGCACACGACACTCCTGACATACCTGATGCCGAACAATTCGGAGAGGGACAATGTGTCGACTCTGCCAGCCAGTTTACCCACACCTGTCTGCAATCTGGATACATCCTCGTTCCAACCTAACAGCACGCAGGTGTCCTACGAGCTCACTCCAGCAGAAGTGACCATTCTCGGGCTGATCTTTGGAGTCTTTTGGCTAGTCTCAGTTCTAGGGAATGCTTTGGTGTGCCTGGTGATACACCGCAGCCGCAGAACTCAGTCGACCACGAATTACTTTGTGGTGTCTATGGCTTGTGCTGATTTGCTGCTGAGCCTGGGCTGCGCTCCATTTGTTCTGCTCCAGGTCTCATCCGGGTATTGGCCCCTGAGTACGGCGGCCTGCAAGGCAGTGCGGTACATCCAGCACTTGTGCCCTGGCGTGCAGGTCTATGTGCTCCTTTCCATCTGTGTGGATCGCTTCTACACGATTGTGTATCCACTGAGCTTCAAAGTGTCTCGGGAGAAGGCGAAACGCATGATCCTGGCTTCTTGGCTCTTTGACGCAGCCTTCGTCTCCCCGTGCCTCTTTTTCTATGGATCTTCTTCGTCAATTGCGCAAAGACACTGTGAATTTTTCCTTCCAGGATCTTGGGATGGTCTGGCCTACGCTCTCACTCACCTCCTGTTTGGTTTCCTGGTTCCAGCACTTCTTATCTTATCCTTCTACCAGAGGGTAGTGCGCTACATCTGGCGGATTAGTGCGGACGGACGCACGGTGCGCAGGACTATGAACATTGTACCCAGAACAAAAGTAAAAACCATCAAGATGTTCCTGATGCTCAACACTGTGTTCCTCCTCACATGGATGCCTTTTTACGTAGCACAGCTTTGGCATCCTGATGTATCCGCTGGCCCCAACAGGCAGGGGGCGCTGTTCTTTGTTGCAATCGCATGGATGTCGTTCAGCTCCACTGCTTCTAAGCCAACGCTCTACTCGGTGTACAACGCCAATTTCAGACgaggaatgagagagacatTCTGCATGTCATCGATGAAGTGCTACCGGAGCAACGCGTACACCATCACCGCCAGTTCACGgatagctaaaaaaaattacgTGGGTGTTGTAGACTTGCCAGTGCCGCCAAAAACTCTGATCAAAGATTCCGTTTATGACACTTTTGACCGagaagcaaaagagaaaaaactggCATGGCCTATAAGTGTCAACCCACCAAACACATTTGTATAGAATGGCATAGTGACATGTCTGTCCAAATGTACTCAAAGGTGCTCGGGTTCACATTTTTTTGGAACACACCTAGCATCGAGAACTGAAAGTGCTATACCTATTGTTATTCTAACTGAAACAGACAAGCAGGACAAAAGCAACAAGTTGCTCAGTTTAACTGACAGTAGCCAGGTGTCTAGCTCATGCGTTCGTGAGAAGTACTTTTGTGTCATTTCTGTCTGTAGTATGTTACGTAATGTTAAATTCTTGTATTTTGTTTCTTGTGATCATAAATGTCGTGATGCAAAACGAAACCGTCAGGTTGGAAGACACTTGTTGAGAGAAAGCAATTGTGAGTCTATCTTATCTATATGTCCATGCAGTTTAGATTTGTTCTATGGGTTTGTGAGAGGAATGTCATCTACACTGCAATCGATGGATGGGCTTTCTCACGATACTACTGCTGTGATGATGCTTTTGTTTATTACCATAGAGTGTTAATTTCTGTAGGAAACATGTCCTGTTCCAGCAAATGTCCAAAACTGTGTTGCATTAACAATGATgagcaaagaataaaaaaaagaatcagttGCATATCAAATACAGGCTCAATTTCTTAATGTTTTAGTAGCGGCCTTCTGTGAAAATCACTGTAGAGCAGATGGCATTGTTTCTGCTTTATTGGTGGCAAACAGTGTTAAAAAGATATGGCTCCATTACACAACgaataataaaatgtacttcAATATGAACACCATTAGTGTCTAAATGAACAGTGTGACATTTCCAGCATTAACTTTCCATGCTTTTGGGTTGTTTGATATTAGTTTCATTGTCTGTCTGAGAACAAAAcctcaaatgaaatgaaattcaaCAAAAGACATTTAaccaaatgatgtaaaatctTTCACTGTAAAATCTACTGTCATTAAGCAAGACATAAAATTACCTAAAACATCAATTAACTATGGAAGTTTGGAAAGGCCACAAGGTTTCTTGAGATCATGACTTATTTTCCTCATGATGTCGAAATGCATGATTAGGCATACATGCCTACATACATGATACGGATGAGCGTGTCTGTTTTTAGTTTAATCAGCAACTGATCCAAGAGGAAATAGCTGTATGTTTATCAGAGCTAGACAATTTCCGTCACTTGAGAAGGCCACTCTGCACCTGTACCGTCACGGACACGACAGTGATCCTGAACAGATGATCAGTTTCACTGCCAGATAACTTGAGGGACCGGTATGTCTCCACGGTTGCCACATGATGTTTGAGAGATGCCACCTAAATGGTTTGCGGTTCAGGACATTTTCTTCCACCTTCTTCAAAATCTTCGGAAATAGGATGTAAATACTGCAGAATCTCAGAAAAGCACTTTTGTTATCTTGAGCTCATGAGAAAAAGAGCTCATGCAAACTTGTGATAAATTATGAACAATGAATAAGttggaaaaatagaaataacTGATAGCTTTTCTGGACTACCGTAATCAACAGAATGTGCTGGGTAAATTGAGTATGCTGACAAATTTAAAATAGGCACATCACTGACTTAAATAGTCAGGAGCACTGAATCAAAACTTCATAACCACTGACAAACCCAGCAGAGGAAAGAAATCTTATTAAATGTTTACGCTAAG
>XM_034313339.1
ctgacagttgtttTCAGCTCTCCAATACTAACAGTCCcactggaagccccgcccccttccatAGCATGCAATTTTCTAGTGTTGtttaactaaaacagacaagCGACACACACACTACGCTTTCTACCTTTGACAAGTGATATGTGAAAGGACCCTGGAGTTGGCAGGTCTGTATTTGGATAGCGTTGTtaaaacaaagcagctttacagaaatccagatgtagatttagagcAAAGCAGAGGCGACAATGGTGAGGAAAAAATCCCTGTGACGTGATGtggaagaaacattgagaggaaccagttCTTATGTACAAACGTACAACACCCAGGTCTGACTTACCACGGCTACAGAAATGGTGTACGCTTTGCCGATGGACGCTGTGAAGCCGTCTCTGCACACGACACTCCTGACATACCTGATGCCGAACAATTCGGAGAGGGACAATGTGTCGACTCTGCCAGCCAGTTTACCCACACCTGTCTGCAATCTGGATACATCCTCGTTCCAACCTAACAGCACGCAGGTGTCCTACGAGCTCACTCCAGCAGAAGTGACCATTCTCGGGCTGATCTTTGGAGTCTTTTGGCTAGTCTCAGTTCTAGGGAATGCTTTGGTGTGCCTGGTGATACACCGCAGCCGCAGAACTCAGTCGACCACGAATTACTTTGTGGTGTCTATGGCTTGTGCTGATTTGCTGCTGAGCCTGGGCTGCGCTCCATTTGTTCTGCTCCAGGTCTCATCCGGGTATTGGCCCCTGAGTACGGCGGCCTGCAAGGCAGTGCGGTACATCCAGCACTTGTGCCCTGGCGTGCAGGTCTATGTGCTCCTTTCCATCTGTGTGGATCGCTTCTACACGATTGTGTATCCACTGAGCTTCAAAGTGTCTCGGGAGAAGGCGAAACGCATGATCCTGGCTTCTTGGCTCTTTGACGCAGCCTTCGTCTCCCCGTGCCTCTTTTTCTATGGATCTTCTTCGTCAATTGCGCAAAGACACTGTGAATTTTTCCTTCCAGGATCTTGGGATGGTCTGGCCTACGCTCTCACTCACCTCCTGTTTGGTTTCCTGGTTCCAGCACTTCTTATCTTATCCTTCTACCAGAGGGTAGTGCGCTACATCTGGCGGATTAGTGCGGACGGACGCACGGTGCGCAGGACTATGAACATTGTACCCAGAACAAAAGTAAAAACCATCAAGATGTTCCTGATGCTCAACACTGTGTTCCTCCTCACATGGATGCCTTTTTACGTAGCACAGCTTTGGCATCCTGATGTATCCGCTGGCCCCAACAGGCAGGGGGCGCTGTTCTTTGTTGCAATCGCATGGATGTCGTTCAGCTCCACTGCTTCTAAGCCAACGCTCTACTCGGTGTACAACGCCAATTTCAGACgaggaatgagagagacatTCTGCATGTCATCGATGAAGTGCTACCGGAGCAACGCGTACACCATCACCGCCAGTTCACGgatagctaaaaaaaattacgTGGGTGTTGTAGACTTGCCAGTGCCGCCAAAAACTCTGATCAAAGATTCCGTTTATGACACTTTTGACCGagaagcaaaagagaaaaaactggCATGGCCTATAAGTGTCAACCCACCAAACACATTTGTATAGAATGGCATAGTGACATGTCTGTCCAAATGTACTCAAAGGTGCTCGGGTTCACATTTTTTTGGAACACACCTAGCATCGAGAACTGAAAGTGCTATACCTATTGTTATTCTAACTGAAACAGACAAGCAGGACAAAAGCAACAAGTTGCTCAGTTTAACTGACAGTAGCCAGGTGTCTAGCTCATGCGTTCGTGAGAAGTACTTTTGTGTCATTTCTGTCTGTAGTATGTTACGTAATGTTAAATTCTTGTATTTTGTTTCTTGTGATCATAAATGTCGTGATGCAAAACGAAACCGTCAGGTTGGAAGACACTTGTTGAGAGAAAGCAATTGTGAGTCTATCTTATCTATATGTCCATGCAGTTTAGATTTGTTCTATGGGTTTGTGAGAGGAATGTCATCTACACTGCAATCGATGGATGGGCTTTCTCACGATACTACTGCTGTGATGATGCTTTTGTTTATTACCATAGAGTGTTAATTTCTGTAGGAAACATGTCCTGTTCCAGCAAATGTCCAAAACTGTGTTGCATTAACAATGATgagcaaagaataaaaaaaagaatcagttGCATATCAAATACAGGCTCAATTTCTTAATGTTTTAGTAGCGGCCTTCTGTGAAAATCACTGTAGAGCAGATGGCATTGTTTCTGCTTTATTGGTGGCAAACAGTGTTAAAAAGATATGGCTCCATTACACAACgaataataaaatgtacttcAATATGAACACCATTAGTGTCTAAATGAACAGTGTGACATTTCCAGCATTAACTTTCCATGCTTTTGGGTTGTTTGATATTAGTTTCATTGTCTGTCTGAGAACAAAAcctcaaatgaaatgaaattcaaCAAAAGACATTTAaccaaatgatgtaaaatctTTCACTGTAAAATCTACTGTCATTAAGCAAGACATAAAATTACCTAAAACATCAATTAACTATGGAAGTTTGGAAAGGCCACAAGGTTTCTTGAGATCATGACTTATTTTCCTCATGATGTCGAAATGCATGATTAGGCATACATGCCTACATACATGATACGGATGAGCGTGTCTGTTTTTAGTTTAATCAGCAACTGATCCAAGAGGAAATAGCTGTATGTTTATCAGAGCTAGACAATTTCCGTCACTTGAGAAGGCCACTCTGCACCTGTACCGTCACGGACACGACAGTGATCCTGAACAGATGATCAGTTTCACTGCCAGATAACTTGAGGGACCGGTATGTCTCCACGGTTGCCACATGATGTTTGAGAGATGCCACCTAAATGGTTTGCGGTTCAGGACATTTTCTTCCACCTTCTTCAAAATCTTCGGAAATAGGATGTAAATACTGCAGAATCTCAGAAAAGCACTTTTGTTATCTTGAGCTCATGAGAAAAAGAGCTCATGCAAACTTGTGATAAATTATGAACAATGAATAAGttggaaaaatagaaataacTGATAGCTTTTCTGGACTACCGTAATCAACAGAATGTGCTGGGTAAATTGAGTATGCTGACAAATTTAAAATAGGCACATCACTGACTTAAATAGTCAGGAGCACTGAATCAAAACTTCATAACCACTGACAAACCCAGCAGAGGAAAGAAATCTTATTAAATGTTTACGCTAAG

Function

symbol description
gpr19 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human GPR19 (G protein-coupled receptor 19).

NR:

description
PREDICTED: probable G-protein coupled receptor 19

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04316 GPR19; G protein-coupled receptor 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923545.2 True 3268 mRNA 0.44 2 11760781 11768918
XM_026923546.2 False 3264 mRNA 0.44 2 11760781 11768919
XM_034313339.1 False 3249 mRNA 0.43 2 11760781 11766409

Neighbor

gene id symbol gene type direction distance location
snap91b LOC108279885,LOC108443062 coding downstream 121050 11610133 ~ 11639731 (-)
LOC117599572 LOC108279885 coding downstream 139593 11618064 ~ 11621188 (-)
atp6v1e1b atp6v1e1,atp6v1e1b,LOC108442797,LOC103026244,LOC107583987,LOC107658907,LOC100708725,LOC102784574 coding downstream 159376 11596768 ~ 11601405 (-)
ada2b LOC108279883 coding downstream 164204 11589813 ~ 11596577 (-)
foxm1 foxm1 coding downstream 268512 11487504 ~ 11492269 (-)
tbk1 tbk1 coding upstream 4972 11773891 ~ 11795925 (-)
ptpro ptpro coding upstream 96873 11865792 ~ 11925507 (-)
syn3 syn3,LOC108279673,LOC108412895 coding upstream 220225 11989144 ~ 12081771 (-)
LOC113532343 NA coding upstream 314207 12083126 ~ 12093099 (-)
LOC113532368 NA coding upstream 328602 12097521 ~ 12108662 (-)
G281102 lrp6,LOC102306404,LOC101476287 non-coding downstream 49797 11707690 ~ 11710984 (-)
G281075 NA non-coding downstream 171094 11589003 ~ 11589687 (-)
G281070 NA non-coding downstream 177144 11583393 ~ 11583637 (-)
G281057 NA non-coding downstream 198717 11561725 ~ 11562064 (-)
G281021 NA non-coding downstream 401145 11359362 ~ 11359636 (-)
G281362 NA non-coding upstream 264177 12033096 ~ 12036362 (-)
G281373 NA non-coding upstream 324938 12093857 ~ 12094059 (-)
G281455 NA non-coding upstream 482395 12251314 ~ 12254155 (-)
G281486 NA non-coding upstream 600040 12368959 ~ 12369265 (-)
G281510 LOC108279795,LOC108442313 non-coding upstream 688644 12457563 ~ 12459092 (-)
dusp16 dusp16 other downstream 7868 11721063 ~ 11752913 (-)
G281092 mansc1 other downstream 100454 11657890 ~ 11660327 (-)
G281074 rad51ap1 other downstream 172757 11586304 ~ 11588024 (-)
vegfab vegfa,LOC108435123 other downstream 501369 11238935 ~ 11259412 (-)
sobpb LOC108279441 other downstream 666605 11079168 ~ 11094176 (-)
LOC113531972 muc19,LOC108280038 other upstream 3371006 15139925 ~ 15184075 (-)
alg12 alg12 other upstream 4632002 16400921 ~ 16406863 (-)
LOC113532230 LOC108280029,LOC107562148,LOC107687569,LOC107741714,LOC105912408 other upstream 5069616 16838535 ~ 16853395 (-)
phf21b phf21b other upstream 5189593 16958512 ~ 17027865 (-)
LOC113532261 smkr1 other upstream 6209844 17978763 ~ 17988280 (-)

Expression


Co-expression Network