cald1a (cald1,LOC107579938,LOC107656362,LOC107725991,LOC107583995)


Basic Information

Item Value
gene id cald1a
gene name cald1,LOC107579938,LOC107656362,LOC107725991,LOC107583995
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 18156824 ~ 18211704 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923660.2
agacagagaggaagagagggagggtGAACAAGAGGGGAACGGAAGAGGACGGCTCTTGCCTTTTCTGGTAGCTACAGCGAACGAGAGAAGCTCTTTGTGTTGGAAGTGGTGCTGAGACAGAAACGAGGAGAGAGCGAGTGAAAGGCTGGAATGGTGTGAGAGCACAGAGAAGCAGACTCCTCCAGGGCTTTTCGTTGCTGTAGTAAGGGCCACACCTCCAGGACTGAACCATGGACGATGATTTTGAGTGGCGCAGGGAGCAgaggagacagaagagagaggagatgcGGCTGGAAGCAGAAAGgaTGGCCTACCGCCGgaatgaggaggatgaggaagaggcaGCTCGTGAGCGTAGACGAAGAGCACGCCAAGAGCGTATGCGAAGCAAGGAGGGCGAGGAGGTAGCTAACCCAGCCGAGAGTGTGGGGCTGAACAGCCACagTGTCACAGTAACAGAGACAGTGTCGAGCTCAGAGCTGAGCTCAGGCAGGGCTGGCGAAGGAGATGAGGAGGAGCAGGCCCTGCTCGAGCGCCTGGCCAAGCGGGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCACTGGACAGGCAGAAACAGCTGGAGTCTGTCGATGCTCCATCCTACAGCACCTACAGTGTGGAGAGCTCCTCTACCACCTCTTACCGAGCATTCAACAACCAGGAGGAGGAGCTGGCACTCAACAGCAAGGAGGAGGTGAAAgaggaggtgaaggaggaggTCATTCCACAGaaggaggtggtggaggagaaGCCACGCAGGTCTTACTTGAAGgagcagGAATCCACTGAGGAAAAAGCTAAAATAGAAGATGAGGGTGGTACTGGTCAGGATGCTGTGCGTCCAAGTGAAAAATGCAAGACTTTAAATGAAGACCTAGCTGATTCTACAGTCATTTCAAAGCAGGAAGTGGAGGAGGATGCGGCAGGAGTCGATGAGGATATAGAGGAAGTAGAGGGGAATGAGTTAGAGATGGAGGATGAGGACGCAGGGAGGAAGAGCAAGCAGCAGAACGGGGGAGTGTATGAAGACagcaaacacaaaaaagtggAGAGAACCCAGAGcCGTGGCAGTGTGCACTCTTCTGAGGGTCCGGCAGCAGAGGAAGGGGACGACGGGGAGCAAACACGCCTGGAGGCTGAGAGGAAGCTGGAGGAgctgaagaggaggagagacgaGACGGAGAACGAGGAGTTTGAGAGGATGAAACAGAAGCAGCAGGAGGCTGAGGCTGAGCTGGAGGagctgaagaagaagagggaggaaaggaggaaggtgctggaggaagaagagaagctGAAGAAGCAAGAGGAGGCTGAGAAGAAGGCAAGAGAGGAGgaggagaagaggaggatgaaggagGAGATAGAGAGGAGGAGAGCGGAGGCAGCTGAACGGAGGCAGAAGGTCGGGGAAGAGGTAGACGGAGAAGCCAGCAAGCCCTTTAAGTGTGTGAGCCCCCGAGGATCCTCTCTGAAGATTGGTGAAAGGGCAGAATTCCTCAACAGGTCAGCACAGAAGAGttccgTTAAGATGTCTCACTCTCCCGTGGTGTCAAAGATTGATAACAGATTGGAGCAGTACACCACAGCTGTGCAGAGTAATAAAGAGGTGCGCTCACCACGTGTGGCTGCAATCGACCTGCCCGTGGTTTCTGATGGTGTGCGGAACATTAAGAGCATGTGGGAGAAGGGCAACGTTTTCAGTTCCACCATCAGCACACCCTCCAGCAACAAGGATGCAGCTGGAATAAAGGTGGGCGTCGCAGGCCGCATCAACGATTGGCTGAACAAAACACCGGAGGCGAGCAAAACACCAGGAGGAAGACCTGTGGACCTGAAACCTGGCGATGTTACTGGCAAGCGCAGTCTATGGGAAAACAAAAGCTCCTCTGCTACCAAGGTGACAAGCAGAGGAGAGAGCAAATCTGTTGCCAATGGAATGGGTCATTAACCTTTCCAAGAAGCCACAGCACCAGGGACCAAGTGAAAGCACCATATTCCTTTCACATGCATGTACTCATaccaaaaataccaaaaataggCTTCTATGTTTTCTATGACCCAGACATATCTCAAAGATGaggtaggaaaaaaaagacagtcttATATTTTTGCCATGCAGTCAAAGGCCTCCAGACAGCATGGTCCTGATTACAGAGTAGTGTTTCACATGAAGCCACTTTTATAGTGTGAAATGTGGACATTTAGATCATCTGAAAATACTGAGCAGTTCTAAAATGACCCATTTCCTTTATATGAATTAGACTTATTTAAATACTTTGCCTAATTTCACTCATAATTTTAAACAGCTTATAATGTGTTGCTTTTTTAGAATCTCTTCTCTGCTAGTCACCCTTCACAccttttaatttataattaaagcaaagcttgacatattcatattttattcatgttcacCAGTCCAGGGCAAAATATGGGCACCCATAGAGTAgtgtattttttacttttactttttgtcAAAGTGACACATTTTTAATAGTGAAACTATGGTCTTAATAATATATGTTAGCACATAGTGTATGTTTTGTAATTAActatatattttgtatgttgccactttatataaaatgacattCTTGCTTCAGCTCTCAATATTAAGATCGGAATACAGCCATTATAGACattcatgattattattacagtatcttcttttattcatttttgtttcaaGTGCTTTTTAGTCAGTATATTCAACATGATATATCAGAGTTCAAGTAGACATAAATGCTTTGCTCTGCACTGAATAAAGGGaacataaaatggaaaaaaaagactttcacaaacatttctctgcATATAATGCTTGCTTGAGTTGCCATTATCATTTTGAAAGTGTGTTCAGTATGTAAAAGGACAGATGGCCCTAAGCCATTACTGTGGACCAATTAATGTTGTctgtttgtgcatttttatttttatttttttttgttcgttttttGTTCGTTTTTTGTTCACGCTTCAGCACTTCATTTAGAGTAGAACCCAAGATGTTGTCAACAGTATAATTGGACTGTAGTATGTGCTGGTGGGCAGACAGTCAGTGGCTTCTTGAATTTCGTTGGTTTCGTTGGTTAATGGTTATGTGACTGATGGTGTATGTGATTGTggcttgtgttgtgttgttgggGTCAATTTCCCCCTGATTAGTATTTTggttcatgttttaaaatgtgaaaatgtctgAGTTTTGGTCTTTGACAATCAATTAAGAGATTGTTGTACTCTCTATATTTTCCGTAATGAACCTTGACTGTATTGCAAATCAGGCCAACTTTAATTCTTTATCTTTTAACACTCTGACCATTTATTGTAACCAAGTTTCACACAGGacatctttttaaatattgtatcaTTGACTCAAAACAGCAATAAAGAGATCAGTGTAAAAACCTCA
>XM_026923661.2
GGAGGAGCTTAATGAGAAAGCGCATCTCTTACAGAAGACCGTCGATTTCTGAGGACTGAGGCGCCTGAGCGCAAACCTCGTAAACTCTGTGTTTTCTAGGCTAAAGCTCAGCCAGGTTTGCACCCAGTGGCAGGGCCACACCTCCAGGACTGAACCATGGACGATGATTTTGAGTGGCGCAGGGAGCAgaggagacagaagagagaggagatgcGGCTGGAAGCAGAAAGgaTGGCCTACCGCCGgaatgaggaggatgaggaagaggcaGCTCGTGAGCGTAGACGAAGAGCACGCCAAGAGCGTATGCGAAGCAAGGAGGGCGAGGAGGTAGCTAACCCAGCCGAGAGTGTGGGGCTGAACAGCCACagTGTCACAGTAACAGAGACAGTGTCGAGCTCAGAGCTGAGCTCAGGCAGGGCTGGCGAAGGAGATGAGGAGGAGCAGGCCCTGCTCGAGCGCCTGGCCAAGCGGGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCACTGGACAGGCAGAAACAGCTGGAGTCTGTCGATGCTCCATCCTACAGCACCTACAGTGTGGAGAGCTCCTCTACCACCTCTTACCGAGCATTCAACAACCAGGAGGAGGAGCTGGCACTCAACAGCAAGGAGGAGGTGAAAgaggaggtgaaggaggaggTCATTCCACAGaaggaggtggtggaggagaaGCCACGCAGGTCTTACTTGAAGgagcagGAATCCACTGAGGAAAAAGCTAAAATAGAAGATGAGGGTGGTACTGGTCAGGATGCTGTGCGTCCAAGTGAAAAATGCAAGACTTTAAATGAAGACCTAGCTGATTCTACAGTCATTTCAAAGCAGGAAGTGGAGGAGGATGCGGCAGGAGTCGATGAGGATATAGAGGAAGTAGAGGGGAATGAGTTAGAGATGGAGGATGAGGACGCAGGGAGGAAGAGCAAGCAGCAGAACGGGGGAGTGTATGAAGACagcaaacacaaaaaagtggAGAGAACCCAGAGcCGTGGCAGTGTGCACTCTTCTGAGGGTCCGGCAGCAGAGGAAGGGGACGACGGGGAGCAAACACGCCTGGAGGCTGAGAGGAAGCTGGAGGAgctgaagaggaggagagacgaGACGGAGAACGAGGAGTTTGAGAGGATGAAACAGAAGCAGCAGGAGGCTGAGGCTGAGCTGGAGGagctgaagaagaagagggaggaaaggaggaaggtgctggaggaagaagagaagctGAAGAAGCAAGAGGAGGCTGAGAAGAAGGCAAGAGAGGAGgaggagaagaggaggatgaaggagGAGATAGAGAGGAGGAGAGCGGAGGCAGCTGAACGGAGGCAGAAGGTCGGGGAAGAGGTAGACGGAGAAGCCAGCAAGCCCTTTAAGTGTGTGAGCCCCCGAGGATCCTCTCTGAAGATTGGTGAAAGGGCAGAATTCCTCAACAGGTCAGCACAGAAGAGttccgTTAAGATGTCTCACTCTCCCGTGGTGTCAAAGATTGATAACAGATTGGAGCAGTACACCACAGCTGTGCAGAGTAATAAAGAGGTGCGCTCACCACGTGTGGCTGCAATCGACCTGCCCGTGGTTTCTGATGGTGTGCGGAACATTAAGAGCATGTGGGAGAAGGGCAACGTTTTCAGTTCCACCATCAGCACACCCTCCAGCAACAAGGATGCAGCTGGAATAAAGGTGGGCGTCGCAGGCCGCATCAACGATTGGCTGAACAAAACACCGGAGGCGAGCAAAACACCAGGAGGAAGACCTGTGGACCTGAAACCTGGCGATGTTACTGGCAAGCGCAGTCTATGGGAAAACAAAAGCTCCTCTGCTACCAAGGTGACAAGCAGAGGAGAGAGCAAATCTGTTGCCAATGGAATGGGTCATTAACCTTTCCAAGAAGCCACAGCACCAGGGACCAAGTGAAAGCACCATATTCCTTTCACATGCATGTACTCATaccaaaaataccaaaaataggCTTCTATGTTTTCTATGACCCAGACATATCTCAAAGATGaggtaggaaaaaaaagacagtcttATATTTTTGCCATGCAGTCAAAGGCCTCCAGACAGCATGGTCCTGATTACAGAGTAGTGTTTCACATGAAGCCACTTTTATAGTGTGAAATGTGGACATTTAGATCATCTGAAAATACTGAGCAGTTCTAAAATGACCCATTTCCTTTATATGAATTAGACTTATTTAAATACTTTGCCTAATTTCACTCATAATTTTAAACAGCTTATAATGTGTTGCTTTTTTAGAATCTCTTCTCTGCTAGTCACCCTTCACAccttttaatttataattaaagcaaagcttgacatattcatattttattcatgttcacCAGTCCAGGGCAAAATATGGGCACCCATAGAGTAgtgtattttttacttttactttttgtcAAAGTGACACATTTTTAATAGTGAAACTATGGTCTTAATAATATATGTTAGCACATAGTGTATGTTTTGTAATTAActatatattttgtatgttgccactttatataaaatgacattCTTGCTTCAGCTCTCAATATTAAGATCGGAATACAGCCATTATAGACattcatgattattattacagtatcttcttttattcatttttgtttcaaGTGCTTTTTAGTCAGTATATTCAACATGATATATCAGAGTTCAAGTAGACATAAATGCTTTGCTCTGCACTGAATAAAGGGaacataaaatggaaaaaaaagactttcacaaacatttctctgcATATAATGCTTGCTTGAGTTGCCATTATCATTTTGAAAGTGTGTTCAGTATGTAAAAGGACAGATGGCCCTAAGCCATTACTGTGGACCAATTAATGTTGTctgtttgtgcatttttatttttatttttttttgttcgttttttGTTCGTTTTTTGTTCACGCTTCAGCACTTCATTTAGAGTAGAACCCAAGATGTTGTCAACAGTATAATTGGACTGTAGTATGTGCTGGTGGGCAGACAGTCAGTGGCTTCTTGAATTTCGTTGGTTTCGTTGGTTAATGGTTATGTGACTGATGGTGTATGTGATTGTggcttgtgttgtgttgttgggGTCAATTTCCCCCTGATTAGTATTTTggttcatgttttaaaatgtgaaaatgtctgAGTTTTGGTCTTTGACAATCAATTAAGAGATTGTTGTACTCTCTATATTTTCCGTAATGAACCTTGACTGTATTGCAAATCAGGCCAACTTTAATTCTTTATCTTTTAACACTCTGACCATTTATTGTAACCAAGTTTCACACAGGacatctttttaaatattgtatcaTTGACTCAAAACAGCAATAAAGAGATCAGTGTAAAAACCTCA
>XM_026923662.2
agacagagaggaagagagggagggtGAACAAGAGGGGAACGGAAGAGGACGGCTCTTGCCTTTTCTGGTAGCTACAGCGAACGAGAGAAGCTCTTTGTGTTGGAAGTGGTGCTGAGACAGAAACGAGGAGAGAGCGAGTGAAAGGCTGGAATGGTGTGAGAGCACAGAGAAGCAGACTCCTCCAGGGCTTTTCGTTGCTGTAGTAAGGGCCACACCTCCAGGACTGAACCATGGACGATGATTTTGAGTGGCGCAGGGAGCAgaggagacagaagagagaggagatgcGGCTGGAAGCAGAAAGgaTGGCCTACCGCCGgaatgaggaggatgaggaagaggcaGCTCGTGAGCGTAGACGAAGAGCACGCCAAGAGCGTATGCGAAGCAAGGAGGGCGAGGAGGTAGCTAACCCAGCCGAGAGTGTGGGGCTGAACAGCCACagTGTCACAGTAACAGAGACAGTGTCGAGCTCAGAGCTGAGCTCAGGCAGGGCTGGCGAAGGAGATGAGGAGGAGCAGGCCCTGCTCGAGCGCCTGGCCAAGCGGGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCACTGGACAGGCAGAAACAGCTGGAGTCTGTCGATGCTCCATCCTACAGCACCTACAGTGTGGAGAGCTCCTCTACCACCTCTTACCGAGCATTCAACAACCAGGAGGAGGAGCTGGCACTCAACAGCAAGGAGGAGGTGAAAgaggaggtgaaggaggaggTCATTCCACAGaaggaggtggtggaggagaaGCCACGCAGGTCTTACTTGAAGgagcagGAATCCACTGAGGAAAAAGCTAAAATAGAAGATGAGATGGAGGATGAGGACGCAGGGAGGAAGAGCAAGCAGCAGAACGGGGGAGTGTATGAAGACagcaaacacaaaaaagtggAGAGAACCCAGAGcCGTGGCAGTGTGCACTCTTCTGAGGGTCCGGCAGCAGAGGAAGGGGACGACGGGGAGCAAACACGCCTGGAGGCTGAGAGGAAGCTGGAGGAgctgaagaggaggagagacgaGACGGAGAACGAGGAGTTTGAGAGGATGAAACAGAAGCAGCAGGAGGCTGAGGCTGAGCTGGAGGagctgaagaagaagagggaggaaaggaggaaggtgctggaggaagaagagaagctGAAGAAGCAAGAGGAGGCTGAGAAGAAGGCAAGAGAGGAGgaggagaagaggaggatgaaggagGAGATAGAGAGGAGGAGAGCGGAGGCAGCTGAACGGAGGCAGAAGGTCGGGGAAGAGGTAGACGGAGAAGCCAGCAAGCCCTTTAAGTGTGTGAGCCCCCGAGGATCCTCTCTGAAGATTGGTGAAAGGGCAGAATTCCTCAACAGGTCAGCACAGAAGAGttccgTTAAGATGTCTCACTCTCCCGTGGTGTCAAAGATTGATAACAGATTGGAGCAGTACACCACAGCTGTGCAGAGTAATAAAGAGGTGCGCTCACCACGTGTGGCTGCAATCGACCTGCCCGTGGTTTCTGATGGTGTGCGGAACATTAAGAGCATGTGGGAGAAGGGCAACGTTTTCAGTTCCACCATCAGCACACCCTCCAGCAACAAGGATGCAGCTGGAATAAAGGTGGGCGTCGCAGGCCGCATCAACGATTGGCTGAACAAAACACCGGAGGCGAGCAAAACACCAGGAGGAAGACCTGTGGACCTGAAACCTGGCGATGTTACTGGCAAGCGCAGTCTATGGGAAAACAAAAGCTCCTCTGCTACCAAGGTGACAAGCAGAGGAGAGAGCAAATCTGTTGCCAATGGAATGGGTCATTAACCTTTCCAAGAAGCCACAGCACCAGGGACCAAGTGAAAGCACCATATTCCTTTCACATGCATGTACTCATaccaaaaataccaaaaataggCTTCTATGTTTTCTATGACCCAGACATATCTCAAAGATGaggtaggaaaaaaaagacagtcttATATTTTTGCCATGCAGTCAAAGGCCTCCAGACAGCATGGTCCTGATTACAGAGTAGTGTTTCACATGAAGCCACTTTTATAGTGTGAAATGTGGACATTTAGATCATCTGAAAATACTGAGCAGTTCTAAAATGACCCATTTCCTTTATATGAATTAGACTTATTTAAATACTTTGCCTAATTTCACTCATAATTTTAAACAGCTTATAATGTGTTGCTTTTTTAGAATCTCTTCTCTGCTAGTCACCCTTCACAccttttaatttataattaaagcaaagcttgacatattcatattttattcatgttcacCAGTCCAGGGCAAAATATGGGCACCCATAGAGTAgtgtattttttacttttactttttgtcAAAGTGACACATTTTTAATAGTGAAACTATGGTCTTAATAATATATGTTAGCACATAGTGTATGTTTTGTAATTAActatatattttgtatgttgccactttatataaaatgacattCTTGCTTCAGCTCTCAATATTAAGATCGGAATACAGCCATTATAGACattcatgattattattacagtatcttcttttattcatttttgtttcaaGTGCTTTTTAGTCAGTATATTCAACATGATATATCAGAGTTCAAGTAGACATAAATGCTTTGCTCTGCACTGAATAAAGGGaacataaaatggaaaaaaaagactttcacaaacatttctctgcATATAATGCTTGCTTGAGTTGCCATTATCATTTTGAAAGTGTGTTCAGTATGTAAAAGGACAGATGGCCCTAAGCCATTACTGTGGACCAATTAATGTTGTctgtttgtgcatttttatttttatttttttttgttcgttttttGTTCGTTTTTTGTTCACGCTTCAGCACTTCATTTAGAGTAGAACCCAAGATGTTGTCAACAGTATAATTGGACTGTAGTATGTGCTGGTGGGCAGACAGTCAGTGGCTTCTTGAATTTCGTTGGTTTCGTTGGTTAATGGTTATGTGACTGATGGTGTATGTGATTGTggcttgtgttgtgttgttgggGTCAATTTCCCCCTGATTAGTATTTTggttcatgttttaaaatgtgaaaatgtctgAGTTTTGGTCTTTGACAATCAATTAAGAGATTGTTGTACTCTCTATATTTTCCGTAATGAACCTTGACTGTATTGCAAATCAGGCCAACTTTAATTCTTTATCTTTTAACACTCTGACCATTTATTGTAACCAAGTTTCACACAGGacatctttttaaatattgtatcaTTGACTCAAAACAGCAATAAAGAGATCAGTGTAAAAACCTCA
>XM_026923664.2
agacagagaggaagagagggagggtGAACAAGAGGGGAACGGAAGAGGACGGCTCTTGCCTTTTCTGGTAGCTACAGCGAACGAGAGAAGCTCTTTGTGTTGGAAGTGGTGCTGAGACAGAAACGAGGAGAGAGCGAGTGAAAGGCTGGAATGGTGTGAGAGCACAGAGAAGCAGACTCCTCCAGGGCTTTTCGTTGCTGTAGTAAGGGCCACACCTCCAGGACTGAACCATGGACGATGATTTTGAGTGGCGCAGGGAGCAgaggagacagaagagagaggagatgcGGCTGGAAGCAGAAAGgaTGGCCTACCGCCGgaatgaggaggatgaggaagaggcaGCTCGTGAGCGTAGACGAAGAGCACGCCAAGAGCGTATGCGAAGCAAGGAGGGCGAGGAGGTAGCTAACCCAGCCGAGAGTGTGGGGCTGAACAGCCACagTGTCACAGTAACAGAGACAGTGTCGAGCTCAGAGCTGAGCTCAGGCAGGGCTGGCGAAGGAGATGAGGAGGAGCAGGCCCTGCTCGAGCGCCTGGCCAAGCGGGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCACTGGACAGGCAGAAACAGCTGGAGTCTGTCGATGCTCCATCCTACAGCACCTACAGTGTGGAGAGCTCCTCTACCACCTCTTACCGAGCATTCAACAACCAGGAGGAGGAGCTGGCACTCAACAGCAAGGAGGAGGTGAAAgaggaggtgaaggaggaggTCATTCCACAGaaggaggtggtggaggagaaGCCACGCAGGTCTTACTTGAAGgagcagATGGAGGATGAGGACGCAGGGAGGAAGAGCAAGCAGCAGAACGGGGGAGTGTATGAAGACagcaaacacaaaaaagtggAGAGAACCCAGAGcCGTGGCAGTGTGCACTCTTCTGAGGGTCCGGCAGCAGAGGAAGGGGACGACGGGGAGCAAACACGCCTGGAGGCTGAGAGGAAGCTGGAGGAgctgaagaggaggagagacgaGACGGAGAACGAGGAGTTTGAGAGGATGAAACAGAAGCAGCAGGAGGCTGAGGCTGAGCTGGAGGagctgaagaagaagagggaggaaaggaggaaggtgctggaggaagaagagaagctGAAGAAGCAAGAGGAGGCTGAGAAGAAGGCAAGAGAGGAGgaggagaagaggaggatgaaggagGAGATAGAGAGGAGGAGAGCGGAGGCAGCTGAACGGAGGCAGAAGGTCGGGGAAGAGGTAGACGGAGAAGCCAGCAAGCCCTTTAAGTGTGTGAGCCCCCGAGGATCCTCTCTGAAGATTGGTGAAAGGGCAGAATTCCTCAACAGGTCAGCACAGAAGAGttccgTTAAGATGTCTCACTCTCCCGTGGTGTCAAAGATTGATAACAGATTGGAGCAGTACACCACAGCTGTGCAGAGTAATAAAGAGGTGCGCTCACCACGTGTGGCTGCAATCGACCTGCCCGTGGTTTCTGATGGTGTGCGGAACATTAAGAGCATGTGGGAGAAGGGCAACGTTTTCAGTTCCACCATCAGCACACCCTCCAGCAACAAGGATGCAGCTGGAATAAAGGTGGGCGTCGCAGGCCGCATCAACGATTGGCTGAACAAAACACCGGAGGCGAGCAAAACACCAGGAGGAAGACCTGTGGACCTGAAACCTGGCGATGTTACTGGCAAGCGCAGTCTATGGGAAAACAAAAGCTCCTCTGCTACCAAGGTGACAAGCAGAGGAGAGAGCAAATCTGTTGCCAATGGAATGGGTCATTAACCTTTCCAAGAAGCCACAGCACCAGGGACCAAGTGAAAGCACCATATTCCTTTCACATGCATGTACTCATaccaaaaataccaaaaataggCTTCTATGTTTTCTATGACCCAGACATATCTCAAAGATGaggtaggaaaaaaaagacagtcttATATTTTTGCCATGCAGTCAAAGGCCTCCAGACAGCATGGTCCTGATTACAGAGTAGTGTTTCACATGAAGCCACTTTTATAGTGTGAAATGTGGACATTTAGATCATCTGAAAATACTGAGCAGTTCTAAAATGACCCATTTCCTTTATATGAATTAGACTTATTTAAATACTTTGCCTAATTTCACTCATAATTTTAAACAGCTTATAATGTGTTGCTTTTTTAGAATCTCTTCTCTGCTAGTCACCCTTCACAccttttaatttataattaaagcaaagcttgacatattcatattttattcatgttcacCAGTCCAGGGCAAAATATGGGCACCCATAGAGTAgtgtattttttacttttactttttgtcAAAGTGACACATTTTTAATAGTGAAACTATGGTCTTAATAATATATGTTAGCACATAGTGTATGTTTTGTAATTAActatatattttgtatgttgccactttatataaaatgacattCTTGCTTCAGCTCTCAATATTAAGATCGGAATACAGCCATTATAGACattcatgattattattacagtatcttcttttattcatttttgtttcaaGTGCTTTTTAGTCAGTATATTCAACATGATATATCAGAGTTCAAGTAGACATAAATGCTTTGCTCTGCACTGAATAAAGGGaacataaaatggaaaaaaaagactttcacaaacatttctctgcATATAATGCTTGCTTGAGTTGCCATTATCATTTTGAAAGTGTGTTCAGTATGTAAAAGGACAGATGGCCCTAAGCCATTACTGTGGACCAATTAATGTTGTctgtttgtgcatttttatttttatttttttttgttcgttttttGTTCGTTTTTTGTTCACGCTTCAGCACTTCATTTAGAGTAGAACCCAAGATGTTGTCAACAGTATAATTGGACTGTAGTATGTGCTGGTGGGCAGACAGTCAGTGGCTTCTTGAATTTCGTTGGTTTCGTTGGTTAATGGTTATGTGACTGATGGTGTATGTGATTGTggcttgtgttgtgttgttgggGTCAATTTCCCCCTGATTAGTATTTTggttcatgttttaaaatgtgaaaatgtctgAGTTTTGGTCTTTGACAATCAATTAAGAGATTGTTGTACTCTCTATATTTTCCGTAATGAACCTTGACTGTATTGCAAATCAGGCCAACTTTAATTCTTTATCTTTTAACACTCTGACCATTTATTGTAACCAAGTTTCACACAGGacatctttttaaatattgtatcaTTGACTCAAAACAGCAATAAAGAGATCAGTGTAAAAACCTCA
>XR_003403330.2
agacagagaggaagagagggagggtGAACAAGAGGGGAACGGAAGAGGACGGCTCTTGCCTTTTCTGGTAGCTACAGCGAACGAGAGAAGCTCTTTGTGTTGGAAGTGGTGCTGAGACAGAAACGAGGAGAGAGCGAGTGAAAGGCTGGAATGGTGTGAGAGCACAGAGAAGCAGACTCCTCCAGGGCTTTTCGTTGCTGTAGTAAGGGCCACACCTCCAGGACTGAACCATGGACGATGATTTTGAGTGGCGCAGGGAGCAgaggagacagaagagagaggagatgcGGCTGGAAGCAGAAAGgaTGGCCTACCGCCGgaatgaggaggatgaggaagaggcaGCTCGTGAGCGTAGACGAAGAGCACGCCAAGAGCGTATGCGAAGCAAGGAGGGCGAGGAGGTAGCTAACCCAGCCGAGAGTGTGGGGCTGAACAGCCACagTGTCACAGTAACAGAGACAGTGTCGAGCTCAGAGCTGAGCTCAGGCAGGGCTGGCGAAGGAGATGAGGAGGAGCAGGCCCTGCTCGAGCGCCTGGCCAAGCGGGAGGAGCGCAGGCAGAGGAGGATGAAGGAGGCACTGGACAGGCAGAAACAGCTGGAGTCTGTCGATGCTCCATCCTACAGCACCTACAGTGTGGAGAGCTCCTCTACCACCTCTTACCGAGCATTCAACAACCAGGAGGAGGAGCTGGCACTCAACAGCAAGGAGGAGGTGAAAgaggaggtgaaggaggaggTCATTCCACAGaaggaggtggtggaggagaaGCCACGCAGGTCTTACTTGAAGgagcagGAATCCACTGAGGAAAAAGCTAAAATAGAAGATGAGGGTGGTACTGGTCAGGATGCTGTGCGTCCAAGTGAAAAATGCAAGACTTTAAATGAAGACCTAGCTGATTCTACAGTCATTTCAAAGCAGGAAGTGGAGGAGGATGCGGCAGGAGTCGATGAGGATATAGAGGAAGTAGAGGGGAATGAGTTAGAGATGGAGGATGAGGACGCAGGGAGGAAGAGCAAGCAGCAGAACGGGGGAGTGTATGAAGACagcaaacacaaaaaagtggAGAGAACCCAGAGcCGTGGCAGTGTGCACTCTTCTGAGGGTCCGGCAGCAGAGGAAGGGGACGACGGGGAGCAAACACGCCTGGAGGCTGAGAGGAAGCTGGAGGAgctgaagaggaggagagacgaGACGGAGAACGAGGAGTTTGAGAGGATGAAACAGAAGCAGCAGGAGGCTGAGGCTGAGCTGGAGGagctgaagaagaagagggaggaaaggaggaaggtgctggaggaagaagagaagctGAAGAAGCAAGAGGAGGCTGAGAAGAAGGCAAGAGAGGAGgaggagaagaggaggatgaaggagGAGATAGAGAGGAGGAGAGCGGAGGCAGCTGAACGGAGGCAGAAGGTCGGGGAAGAGGTAGACGGAGAAGCCAGCAAGCCCTTTAAGTGTGTGAGCCCCCGAGGATCCTCTCTGAAGATTGGTGAAAGGGCAGAATTCCTCAACAGGTCAGCACAGAAGAGttccgTTAAGATGTCTCACTCTCCCGTGGTGTCAAAGATTGATAACAGATTGGAGCAGTACACCACAGCTGTGCAGAGTAATAAAGAGGTGCGCTCACCACGTGTGGCTGCAATCGACCTGCCCGTGGTTTCTGATGGTGTGCGGAACATTAAGAGCATGTGGGAGAAGGGCAACGTTTTCAGTTCCACCATCAGCACACCCTCCAGCAACAAGGATGCAGCTGGAATAAAGGTGGGCGTCGCAGGCCGCATCAACGATTGGCTGAACAAAACACCGGAGGCGAGCAAAACACCAGGAGGAAGACCTGTGGACCTGAAACCTGGCGATGTTACTGGCAAGCGCAGTCTATGGGAAAACAAAAGCTCCTCTGCTACCAAGacTTCTTCCTGCTAGTTGTCTTCAGATTTGGCTCCTTGAGGAGGTGACAAGCAGAGGAGAGAGCAAATCTGTTGCCAATGGAATGGGTCATTAACCTTTCCAAGAAGCCACAGCACCAGGGACCAAGTGAAAGCACCATATTCCTTTCACATGCATGTACTCATaccaaaaataccaaaaataggCTTCTATGTTTTCTATGACCCAGACATATCTCAAAGATGaggtaggaaaaaaaagacagtcttATATTTTTGCCATGCAGTCAAAGGCCTCCAGACAGCATGGTCCTGATTACAGAGTAGTGTTTCACATGAAGCCACTTTTATAGTGTGAAATGTGGACATTTAGATCATCTGAAAATACTGAGCAGTTCTAAAATGACCCATTTCCTTTATATGAATTAGACTTATTTAAATACTTTGCCTAATTTCACTCATAATTTTAAACAGCTTATAATGTGTTGCTTTTTTAGAATCTCTTCTCTGCTAGTCACCCTTCACAccttttaatttataattaaagcaaagcttgacatattcatattttattcatgttcacCAGTCCAGGGCAAAATATGGGCACCCATAGAGTAgtgtattttttacttttactttttgtcAAAGTGACACATTTTTAATAGTGAAACTATGGTCTTAATAATATATGTTAGCACATAGTGTATGTTTTGTAATTAActatatattttgtatgttgccactttatataaaatgacattCTTGCTTCAGCTCTCAATATTAAGATCGGAATACAGCCATTATAGACattcatgattattattacagtatcttcttttattcatttttgtttcaaGTGCTTTTTAGTCAGTATATTCAACATGATATATCAGAGTTCAAGTAGACATAAATGCTTTGCTCTGCACTGAATAAAGGGaacataaaatggaaaaaaaagactttcacaaacatttctctgcATATAATGCTTGCTTGAGTTGCCATTATCATTTTGAAAGTGTGTTCAGTATGTAAAAGGACAGATGGCCCTAAGCCATTACTGTGGACCAATTAATGTTGTctgtttgtgcatttttatttttatttttttttgttcgttttttGTTCGTTTTTTGTTCACGCTTCAGCACTTCATTTAGAGTAGAACCCAAGATGTTGTCAACAGTATAATTGGACTGTAGTATGTGCTGGTGGGCAGACAGTCAGTGGCTTCTTGAATTTCGTTGGTTTCGTTGGTTAATGGTTATGTGACTGATGGTGTATGTGATTGTggcttgtgttgtgttgttgggGTCAATTTCCCCCTGATTAGTATTTTggttcatgttttaaaatgtgaaaatgtctgAGTTTTGGTCTTTGACAATCAATTAAGAGATTGTTGTACTCTCTATATTTTCCGTAATGAACCTTGACTGTATTGCAAATCAGGCCAACTTTAATTCTTTATCTTTTAACACTCTGACCATTTATTGTAACCAAGTTTCACACAGGacatctttttaaatattgtatcaTTGACTCAAAACAGCAATAAAGAGATCAGTGTAAAAACCTCA

Function

symbol description
cald1 Enables cadherin binding activity. Predicted to be involved in actin filament bundle assembly and angiogenesis. Located in actin cytoskeleton and plasma membrane.

NR:

description
PREDICTED: non-muscle caldesmon-like isoform X2

GO:

id name namespace
GO:0006936 muscle contraction biological_process
GO:0017022 myosin binding molecular_function
GO:0005516 calmodulin binding molecular_function
GO:0003779 actin binding molecular_function

KEGG:

id description
K12327 CALD1; caldesmon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923660.2 False 3437 mRNA 0.45 16 18156824 18187998
XM_026923661.2 False 3363 mRNA 0.45 16 18156824 18211704
XM_026923662.2 False 3281 mRNA 0.45 15 18156824 18187998
XM_026923664.2 False 3245 mRNA 0.45 14 18156824 18187998
XR_003403330.2 True 3480 misc_RNA 0.45 17 18156824 18187998

Neighbor

gene id symbol gene type direction distance location
tnnt2e LOC108425385,LOC108279691,LOC107658902,LOC107725993 coding downstream 264 18145872 ~ 18156560 (-)
arl1 arl1 coding downstream 15050 18137795 ~ 18141774 (-)
slc5a8 LOC108279688 coding downstream 50378 18097627 ~ 18106446 (-)
strip2 strip2,LOC107656389 coding downstream 133352 17990629 ~ 18023472 (-)
ano2b LOC108279462,LOC108425378 coding downstream 185580 17907628 ~ 17971244 (-)
tnni4a zgc:101560,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC108425328,LOC107658770,LOC107584059 coding upstream 13796 18225500 ~ 18233739 (-)
dock4b dock4b,LOC108279862,LOC108425388,LOC107656358,LOC106609220 coding upstream 272736 18484440 ~ 18593405 (-)
tmem168a LOC108280006,LOC108425390,LOC103042505 coding upstream 453505 18665209 ~ 18675567 (-)
gpr85 gpr85,LOC106576049,LOC107584006,LOC106609248 coding upstream 528071 18739775 ~ 18744162 (-)
ppp1r3aa NA coding upstream 570043 18781747 ~ 18787897 (-)
G284520 NA non-coding downstream 67882 18088654 ~ 18088942 (-)
G284352 NA non-coding downstream 255557 17901025 ~ 17901267 (-)
G284349 NA non-coding downstream 258594 17895335 ~ 17898230 (-)
G284323 NA non-coding downstream 305930 17850457 ~ 17850894 (-)
G284295 NA non-coding downstream 366061 17790534 ~ 17790763 (-)
G284590 NA non-coding upstream 134749 18346453 ~ 18346836 (-)
G284862 NA non-coding upstream 608238 18819942 ~ 18823200 (-)
G284866 NA non-coding upstream 619221 18830925 ~ 18831139 (-)
G284882 NA non-coding upstream 650141 18861845 ~ 18862152 (-)
G284885 mdfic,LOC107095313,LOC106906624,LOC106523521 non-coding upstream 656353 18868057 ~ 18938095 (-)
trnaa-ugc_14 NA other downstream 64280 18092217 ~ 18092544 (-)
trnaa-ugc_13 NA other downstream 66202 18090551 ~ 18090622 (-)
trnaa-ugc_11 NA other downstream 72970 18083783 ~ 18083854 (-)
trnaa-ugc_10 NA other downstream 73515 18083238 ~ 18083309 (-)
tmem209 tmem209,LOC107658886,LOC107725925,LOC107583965 other downstream 74463 18068598 ~ 18082361 (-)
trnae-cuc_38 NA other upstream 618 18212322 ~ 18212393 (-)
LOC113532190 NA other upstream 487217 18698921 ~ 18747833 (-)
rap1b rap1b,LOC106576640,LOC107695907 other upstream 1466579 19678283 ~ 19735232 (-)
G285607 NA other upstream 2101363 20313067 ~ 20320050 (-)
LOC113544587 NA other upstream 3249122 21460826 ~ 21471100 (-)

Expression


Co-expression Network