ankrd16 (ankrd16)


Basic Information

Item Value
gene id ankrd16
gene name ankrd16
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 9617408 ~ 9623595 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034312996.1
caGAGGGCACATCTCACATCCTCACATGGATCCGTTAAAAGTCAGCCATATTGGTTTAGTTTGAATAGAAATTTGCGGCCATTTTCACTCGAGTGTGTGGATGTTGCTGCTTGCTTCACATAtgacaacaaaaatattaaaacccaGAAGAAAAGTCGTGTGCCGTGTTTATGTGAATTATAATACCGGCTACATGTTTGTGCTAACACTATAGTTTTAAAATGGCTGACGAAAACATATCTAAGCTCTTAATCAAGTTGACTCAGGATGGACATCTGTgtaagattaaaaaacaaatagaggAAAGGAGCGTAATTAAACAGTCTATAAATGCACATTTTGGGAAATCTGGAGACACTCTGTTGCATTATGCTGCCAGACATGGACATTTAGATATTGTGAGGTATTTTGTTGAAGACTTGAACATGGACGTCGAGCTGCACAATAATGACTACAAGCGAGCTTTACACGAAGCTTCTTCCATGAGTCATGAGCAGTGTGTTCGCTACCTTATCGATAAAGGAGCAAAAATTGACTGTCTAAAGAAGGCAGACTGGACTCCTCTTATGATGGCCTGCACGCGCCACAACTTTGAAGTTATCAAAGTGCTTCTGGACCATGGTGCTGACCCGACTCTGCAGAATAAAGATGGCTGGAACTCATTCCACATTGCATGTCGAGAGGGCGATCCAGCTGTGATAGAGCACCTTCTGTACACCAGGCCGGAAGTGTGGAGGACAGAGAGCAAGACACGCCGGACTCCTCTACATACTGCTGGTATTGCTATGCATGGCTGTCTGGAAGTTGTCAAGATTCTTCTTGAGAGATGTGATTATAAGCCTGACGAGAAAGACAGCTGTGGAGTTACACCATTCATGGACGCTGTGAGAAATGGACATCTGGGTGTAGCCAAGCTGCTGCTGGAGAAACACCAAGCCTGTCCAACTGCTGTAGATATTCTGGGAGCACAGCCACTACATCAGGCCTCTGTAACAGCCGAAGAAGAGGCACTGCGTTTCCTCGTACACGAGCTTAGCATTGACGTGAATGTGAGAGCCACAGCATTGGAGCTTACAGCTCTTCATTACGCTGCTAAGGAAGGACACACGAGCACCATAAAAACCCTGCTGCAGTTAGGTGCTGATCTTCATGCTAGGGATAAGAAAGGACGGTCAGCTTTACACATGGCGTGCATCGGCCAGCATGCGATCACAGCAAGGACCCTGTTACAGCTCGGACTCACAGATACAGAGGACAACACGGGCACTACAGCTAGACAGCATGCCAAGAAACCAGACATAACCAGAGTGTTCGAGACACCTGAGGAGCCAGAGCCTTAACAAGCAGCTATACAGataaatcatattaaattataatactAAAGCAGTTCTGTgcaaatatatttgaaataaatcaagCACTTCTGTGTGGAa
>XM_034312997.1
GGGCACATCTCACATCCTCACATGGATCCGTTAAAAGTCAGCCATATTGGTTTAGTTTGAATAGAAATTTGCGGCCATTTTCACTCGAGTGTGTGGATGTTGCTGCTTGCTTCACATAtgacaacaaaaatattaaaacccaGAAGAAAAGTCGTGTGCCGTGTTTATGTGAATTATAATACCGGCTACATGTTTGTGCTAACACTATAGTTTTAAAATGGCTGACGAAAACATATCTAAGCTCTTAATCAAGTTGACTCAGGATGGACATCTGTgtaagattaaaaaacaaatagaggAAAGGAGCGTAATTAAACAGTCTATAAATGCACATTTTGGGAAATCTGGAGACACTCTGTTGCATTATGCTGCCAGACATGGACATTTAGATATTGTGAGGTATTTTGTTGAAGACTTGAACATGGACGTCGAGCTGCACAATAATGACTACAAGCGAGCTTTACACGAAGCTTCTTCCATGAGTCATGAGCAGTGTGTTCGCTACCTTATCGATAAAGGAGCAAAAATTGACTGTCTAAAGAAGGCAGACTGGACTCCTCTTATGATGGCCTGCACGCGCCACAACTTTGAAGTTATCAAAGTGCTTCTGGACCATGGTGCTGACCCGACTCTGCAGAATAAAGATGGCTGGAACTCATTCCACATTGCATGTCGAGAGGGCGATCCAGCTGTGATAGAGCACCTTCTGTACACCAGGCCGGAAGTGTGGAGGACAGAGAGCAAGACACGCCGGACTCCTCTACATACTGCTGCTATGCATGGCTGTCTGGAAGTTGTCAAGATTCTTCTTGAGAGATGTGATTATAAGCCTGACGAGAAAGACAGCTGTGGAGTTACACCATTCATGGACGCTGTGAGAAATGGACATCTGGGTGTAGCCAAGCTGCTGCTGGAGAAACACCAAGCCTGTCCAACTGCTGTAGATATTCTGGGAGCACAGCCACTACATCAGGCCTCTGTAACAGCCGAAGAAGAGGCACTGCGTTTCCTCGTACACGAGCTTAGCATTGACGTGAATGTGAGAGCCACAGCATTGGAGCTTACAGCTCTTCATTACGCTGCTAAGGAAGGACACACGAGCACCATAAAAACCCTGCTGCAGTTAGGTGCTGATCTTCATGCTAGGGATAAGAAAGGACGGTCAGCTTTACACATGGCGTGCATCGGCCAGCATGCGATCACAGCAAGGACCCTGTTACAGCTCGGACTCACAGATACAGAGGACAACACGGGCACTACAGCTAGACAGCATGCCAAGAAACCAGACATAACCAGAGTGTTCGAGACACCTGAGGAGCCAGAGCCTTAACAAGCAGCTATACAGataaatcatattaaattataatactAAAGCAGTTCTGTgcaaatatatttgaaataaatcaagCACTTCTGTGTGGAa

Function

symbol description
ankrd16 Orthologous to human ANKRD16 (ankyrin repeat domain 16).

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 16 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034312996.1 True 1433 mRNA 0.45 7 9617408 9623595
XM_034312997.1 False 1423 mRNA 0.45 7 9617408 9623591

Neighbor

gene id symbol gene type direction distance location
gdi2 gdi2,LOC108279819,LOC108436005,LOC107754057,LOC107560733,LOC107694307 coding downstream 2108 9600577 ~ 9615300 (-)
asb13a.1 LOC108279822,LOC108436003 coding downstream 17373 9594458 ~ 9600035 (-)
asb13a.2 asb13a.2,LOC108280001,LOC108436004,LOC103022068,LOC107754063,LOC107560715,LOC107655562 coding downstream 24142 9559911 ~ 9593266 (-)
mkln1 mkln1,LOC107754054,LOC107655615,LOC107560731,LOC107757245,LOC107587826 coding downstream 194140 9392029 ~ 9423268 (-)
LOC113531956 LOC108279597,LOC108279598 coding downstream 258358 9350878 ~ 9359050 (-)
pcloa pclo,pcloa coding upstream 5736 9629331 ~ 9698196 (-)
sema3aa LOC108280003,LOC108436009,LOC103023715,LOC107562295,LOC107757236,LOC107560735,LOC107694310 coding upstream 83855 9707450 ~ 9742678 (-)
tspan11 tspan11,LOC108279944,LOC107720401,LOC107593980,LOC107560736,LOC107694254,LOC108436010,LOC107690651 coding upstream 131990 9755585 ~ 9854329 (-)
ccdc59 ccdc59 coding upstream 271490 9895085 ~ 9897952 (-)
pik3cg pik3cg,LOC107656384,LOC107590535,LOC107658948,LOC107583938,LOC107705338 coding upstream 383603 10007198 ~ 10015790 (-)
G279641 NA non-coding downstream 83987 9533222 ~ 9533421 (-)
G279625 NA non-coding downstream 97330 9519833 ~ 9520078 (-)
G279624 net1 non-coding downstream 97681 9517986 ~ 9519727 (-)
G279621 NA non-coding downstream 131639 9485067 ~ 9485769 (-)
G279620 NA non-coding downstream 132460 9484093 ~ 9484948 (-)
G279728 NA non-coding upstream 1004 9624599 ~ 9625119 (-)
G279730 NA non-coding upstream 3742 9627337 ~ 9629153 (-)
G279832 NA non-coding upstream 180583 9804178 ~ 9804403 (-)
G279967 NA non-coding upstream 323736 9947331 ~ 9947536 (-)
G280002 NA non-coding upstream 380746 10004341 ~ 10004812 (-)
G279415 NA other downstream 408845 9207351 ~ 9208563 (-)
G278912 NA other downstream 1397728 8218561 ~ 8219680 (-)
G278634 NA other downstream 1549331 8053088 ~ 8068077 (-)
avpr1ab LOC108279517 other downstream 1646837 7966819 ~ 7970571 (-)
camk1da camk1da,LOC108279878,LOC108428135,LOC107743755,LOC107658855,LOC107726013,LOC107656221 other downstream 2117329 7421988 ~ 7500079 (-)
cracr2ab LOC108280118 other upstream 254886 9878481 ~ 9892386 (-)
LOC113532274 NA other upstream 632377 10255972 ~ 10296198 (-)
si:ch211-51e12.7 LOC108280090 other upstream 1371510 10995105 ~ 11007143 (-)
sobpb LOC108279441 other upstream 1455573 11079168 ~ 11094176 (-)
vegfab vegfa,LOC108435123 other upstream 1615340 11238935 ~ 11259412 (-)

Expression


Co-expression Network