kmt2e (kmt2e)


Basic Information

Item Value
gene id kmt2e
gene name kmt2e
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 3857515 ~ 3906653 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034313181.1
TTACGGCAGTTCTGCCAAGGCCGCCATTTTTTGCACAGGATTGAAGGGATCCGGGGGAAAAAATTAAGAGGGTCAAAAACTGACCTAAAACTATATTTTGAGTGTTAAAAAGCGTCGGGGTTTACGAGATTAATTAACAAAGGAGCCGAAAAGGCGGGTAGTGTCAGTTTTTGGCGTTTTAAACCATCTTTTCTTCAACACATCCGCAGTGGAGAGTATTGTTTTGGTCCTGGTCTCCATTCAAGGCTATTACAGTGGACATTGATACAGgtgGCGTGGATGCATTTAGATGTGTGCCATGCGTGCAGTGGTTGGTATGCGTCAGTGTTTGGGATCGCTCGGCTCTGCTCTCAGTAGGACTCCACACTCGCAGCACAGAGCGTCATGAGCTTAGTCATCCCAGTGGGGGTGGACAACATGGCTGCCGGCTCAGAacctGAATCTGTGGAGGCCAGCCCTGTAGTAGTGGAGAAGTCCAGCTATCCTCATCAGATCTACAGTAGCTCTCACCACTCGCACAGCTACATCGGCCTGCCTTACGCCGATCATAACTATGGGGCTCGGCCGCCCCCGACGCCGCCCGCGTCCCCGCCGCCGTCGGTGTTGATGCGTCCGGGCGAGGGTGTGTTCGGGCAGGACGAGGCGTCCCGAGGCACCACGCTCAGCACCTCAGAGGACGGCAGCTACGGAGCCGACATCACGCGCTGCATCTGCGGCTTCACCCACGATGACGGCTACATGATCTGCTGCGACAAGTGCAGtgtgtggcAGCATATAGACTGTATGGGTATCGATCGGCAGCACATTCCCGAGACGTACCTGTGTGAACGCTGCCAGCCGCGTAGTCTCGACCGAGAGCGCGCCATCCTGCTGCAGACcaggaagagagagaacatgTCCGatggaGACACCAGTGCTACAGAGAGCGGTGATGAAGTTCCTCTGGAGCTCTACACCACGTTCCAGCACACGCCGAGCAGCATCACGCTCACCACCGGCCGCCTCGGCAACAAGCAGAACGACAAAAAGCGCAAGAAGAGCGGAGAGAAGGAGCCGGCCCCGCCCGCCCGCGCCAAGaagGCGTTTAGAGAAGGCTCCAGGAAGTCAAACAGAGTCAAGggctCGGCTCCGGAGTGTGAGCCCATGGACTCTCCGTCTCTGTGGGAGAGTAAGGTGAAGTCGTGGATGGAGCGCTACGAGGAGGCGAGCACCAATCAGTACAGTGACGACGTGCGAGTTCTGCTGCGTGTCAAAGAGGCTCGGGACGGCAAAGCACTCGCCTACAACACACACCCCGCTGCCTTCAAACCACCTgtagagAGTCACATGCAGAAGAATAAGCGGATCCTGAAGGCGGTGCGGGATTTAGCGGCGGACTCCCTGCTGATCGAGTACAGGGGGAAGTTCATGCTCCGCCAGCAGTTTGAGGCGAACGGCTACTTCTTTAAAAGGCCGTACCCGTTCGTATTGTTTTACTCAAAGTTCGACGGTTTGGAGATGTGTGTGGACGCGCGTAGCTTCGGAAACGAAGCGCGGTTTATTCGCCGGTCCTGCACACCCAACGCAGAGGTGCGTCATGTGATCGAGGACGGCATGTTGCACTTGTACATCTACTCGCTGAGATCGATACCTAAAGGCAGCGAGATCACCATCGGGTTCGACTACGACTACAGCAACTgtaaataTAAGGTGGACTGTGCGTGTGTAAGAGGGAATCAGGAATGTCCTGTTCTCAAACACAACCTGGAGCCCACGGAGAACCTGGGTTCTGCTACACGGCGCAGAGGAAGGAAAGATAAAGAGCCGGCGATTCGGGACGAGGCCGGCCAGAACCAGAACCTCACCCTGGACTGCGACGGACCCAAGGGCAAAACGAACAACGACAGCAAACAGAGGAAGCTGTCTCCTCTACGAGTGTCCATCTCTAACAACCAGGATCCTGAGTTAATTGAGGATCTAGAAGAGAAAACCTCCATTAGCAATGACgtagagatggagacagaggaGCACATggcagagaggaggaggaagatgACACGTGAGGAGAGGAAGATGGAGGCCATCCTTCAGGCGTTTGCCCGCatggagaagagggagaagcGGAGGGAGCAAGCTCTGGAAAGAATCGGCACCAAGGGAGAGGTGGGAACTCGGAGTGAAATTAAAGAAGAGCCTCCTGCCACTCCAGAGGTCGAGTCACCTGCTACGCCGCTGTTGGAGCCGGTAAAGGAGGAGGCGGCTCAGAAGGCAGCAAAGGTCAGCCGGAACAAGCAGAGGAAGAGCTTCTCTCGGAACCGGACACACATCGGGCAGCAGAGACGGCGAACACGCACGGCCAGCGCCTGCTCCGACCCGCCGCCAGCGTCCCCCGGAGACGCTCTCGAAACCCAGCTAATGGCGGAAACACAGGATGGGGACACGGGAGCGGTGCCCGAGACTGAAGCTCCACCTACTCACGCCCCAGACGCCACTGCCAGCCCACCTCACACCTCACCTGGGCACAAGTATCCCAAAACGAAAAAGCACTTAGTGAACGAGTGGCTGAGTGTGGAGAAGCAGGAGCAGCGTGTGTTAATGCGCAGTCCCGAGCCCGTTCCTGACCGGCCGCTGAGGATCAGCACTGATCCCGAAGTTTTAGCCACGCAGCTCAACTCTCTGCCCGGGATGGCCTGCAGTCCACACGTCTACAGCACACCCAAGCACTACGTCCGATTTTCTTCTCCGTTCCTGGCCAATCGCAGTCCCAGCACCCCTGCGGTGCCCGCTGCTCGCCGCCGCTCACGAGAACTCTCCGATACTCCGCCCACCTCTGGCTCCTGCAAAAAGcgtTGGCTGAAGCAGGCTTTAGAGGAGGAAGGCAGTCTGAGTCCAGGCGGGCGAACGCTCCTGATGCCCGCTGAAGGACCGCTGACCCCGCCAATCAACGGAGACACTGACAGTCCCATCTCGCTTAACGGCACCTGCccagagtTGCCCACGCCGCTGAAGAAAAGACGTTTGTGTCCGCTGGACTCGTGTGTATCGGAGTCGTCCACACCGTACGCCTCTCCGTGTGCTACACCAACACGACTCGAACCCTCCGACGCCCCGCTAACACCTCAGCTCCTGAACACGTCTCCAGAACCttccacacccacacacacctcccagAACCCAGCACACACCGCGCCACaagagAGCGAGCCGCCGATAGACAGCTCACCGGAGGCTAGCCGAAGACCCAGCACACAAGAGGTCGATCGTGCTCCGTCGCTTTTGGCTTCTCCTATTAGGAAGCTTCCCGAAACTGCGCCTCAGGAGTCtcaaagccccgccccctcgcTACCTGAGCCCCATGAGGCACCTTTAGAGGAGGGTACGGAGGGAGAAGGCACTACAGAAGCGCCGTCTGCATCCTACCACGCGTGGATCAAGAGCCCAGAGCGAGGAGGTCTTTCTTTCTCCCCTATTAACTCCAATCTAAGGGACCTGACGCCGTCACACACGCTGGACATGGGGGCGTTCAGCGAGGCCGCATCCTATTACCCCTGCGCCGAGGAGGGAGGGAACGCGGCCTTCACTCGATCGCTCAGCGGGGACGCCTCAGAAGGAGCAGGAGCAGCTCAGAATCCTCCACAGAAGAAGAAGGTGTCTCTGCTGGAATACAGGAAGCGGCAGCGTGAAGCTCGACGCAGCGGAGGCTCCAAGATCGAGTGCAGCTCTCCGCTTTCAACAGCGCCCCCGGTGGACGTCTTTCCTGTCGCCGTGGAAACAGCGCCTGATTCGGCCGTTCCCGTGGTTACGCTGGGCTCCAGGACCCCGCAGTCTAGCGAGGACCCAGACACCCCAcaacagggagagaaagaggggggaGACGGACAGTGGGTGTCTTCAACTTCAGTGGAACAGGCCCGAGAGCGCGGATACCACAGAGCCCTGCTGCTCAGTGACCACCGCAAAGACGCAGatggaggagagacagaaggaggtgATGCTGTAGCAAGGGAGTGTCCATCACCTAAGAGCTGCAAGAGTCCCTCAACGCACACAtctccgTCTCCAGGCCCGAGCTCCGTGTCCCACTCCTCCCTTCGCTCGTCTAAAGAAGAGGACAGCGACCCTCAGTCCCGTCCCTCGGTCCAGCCGTCCTCGTCCAAGCCACCGCTGTCCAAATCCACCCCTCTGACTCCCAGCAAGCACCCCTCCCAAGCGCACTACGCCGCTCCTTCCCTCCCTATCCCCTCCCCTAAATCTCAGCCTCAGCCGCAGGGTTCGCCCTATCGTGGCCAGAGGACCTTCCTGCCTGCCCCGCCTCCTAACCAATCGCAGTACAGCCCTCAGAACGCCCCGCCCCCTCCTCCCCCGCCCCCTCCGGTACCCCCTACTTCCTCGCCGTACTTCCCTACGCAGTTCAAAGCGGCCGTTTCTACACCCTTCCCTCCCGGCTCGCAGACTCTGCTGCAGTCTCACCACACGCTCCACTTCCAGAGCAGCTCGGCcccccctcctccccctccGCCTCCGCCTCATCCTCAGCCAGGCCCCACCCTCATCCATGTCAATCATCTGCAACCTCCTCCAATCCAGCAGCATCAGCTGATCCTGAGCGCCGCCCCTCCCCcgccgccacctccgcccccTCAGACGCAGAGTTCTCAGCCGACGCAGGTCAGCGGCACCGCCGTCAATCTGCTGTCCATCAAACAAGCCCCGCCTCCTCCGCCATCGTTTCAGAACATTGGTGCATTTCAGACTACTCTCCTGCACCAATCGGGAGCGAGCAACCCTACAGCGGTAACGCCCTCTTCGTATCAGCAGACTGTGTTACCGCCTCCTCCTCCGCCCCCACCGCAACCCACCCCGCCTTCTCAGGGGTCCTCGTCCAATCCTAACGCGACGCAGACCCGAGGCCCGCCTCCTTCCTCAGCGGCATTTCATAACACCGGATACATGGGGACGGGGTGGCActgactccgcccacttcatCCGCCCACAAAAACGAACTCGTAATGAGAAAATAGCGGcggatgattggacaaaatgtaACATAGGCAACTTGATCAtagtgtaaataattttttatgcaCCTTTACACCCAGGAAACAGGACGAGGCAACAAGGGTACACTTACACGGACCGTAACCTGATCTGAGAGACTTTTTACGGAAAACAAGATGGCGGCTCAGTGGTGCTCATTACACAACCTAAacccctccctcctccttcttcttcttcttcttcttccctgaTACACACTTCCAGTCGTCCTGTCTTACTAGAcgtcttttaatgtttttagttTTCCCCGTTCTCTTTTTCGCACTTGTACGATGGACATTCCACgtcgacttttttttttttt

Function

symbol description
kmt2e Predicted to enable metal ion binding activity. Is expressed in central nervous system and intermediate cell mass of mesoderm. Human ortholog(s) of this gene implicated in autistic disorder and cervical cancer. Orthologous to human KMT2E (lysine methyltransferase 2E (inactive)).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K09189 MLL5; [histone H3]-lysine4 N-trimethyltransferase MLL5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034313181.1 True 5341 mRNA 0.58 25 3857515 3906653

Neighbor

gene id symbol gene type direction distance location
orc5 orc5 coding downstream 45899 3798341 ~ 3811616 (-)
hcls1 LOC108279643,LOC107095911,LOC105918344,LOC103358095,LOC102201149,LOC102292035,LOC101481917 coding downstream 101658 3738884 ~ 3755857 (-)
ppfia2 ppfia2,LOC107680027,LOC107694182 coding downstream 165829 3545076 ~ 3691686 (-)
pawr pawr coding downstream 610519 3205288 ~ 3246996 (-)
LOC117599441 LOC108261611 coding downstream 1179483 2672021 ~ 2678032 (-)
kdm7aa kdm7a coding upstream 12649 3919302 ~ 3945301 (-)
cd36 cd36 coding upstream 138053 4044706 ~ 4060514 (-)
psmc2 psmc2,LOC103382982 coding upstream 877475 4784128 ~ 4792797 (-)
gys2 gys2,LOC107659841,LOC107694689 coding upstream 990617 4897270 ~ 4917780 (-)
ldhba ldhb,ldhba,LOC107659842,LOC107589975,LOC107725606,LOC107586539,LOC107744904,LOC107694687 coding upstream 1019063 4925716 ~ 4938813 (-)
G276342 lhfpl3 non-coding downstream 42150 3802393 ~ 3815365 (-)
G276353 NA non-coding downstream 44164 3812540 ~ 3813351 (-)
G276153 NA non-coding downstream 216732 3639967 ~ 3640783 (-)
LOC117599595 NA non-coding downstream 285589 3565035 ~ 3571926 (-)
G276049 NA non-coding downstream 442375 3414868 ~ 3415140 (-)
G276387 NA non-coding upstream 6886 3913539 ~ 3913989 (-)
G276388 NA non-coding upstream 8675 3915328 ~ 3916117 (-)
G276395 NA non-coding upstream 62042 3968695 ~ 4042521 (-)
G276420 NA non-coding upstream 163795 4070448 ~ 4142948 (-)
G276447 NA non-coding upstream 217812 4124465 ~ 4125581 (-)
golgb1 LOC108279640 other downstream 28113 3759211 ~ 3829402 (-)
G276340 NA other downstream 120438 3736130 ~ 3737077 (-)
G276075 NA other downstream 318772 3536997 ~ 3538743 (-)
lin7a lin7a other downstream 363499 3430190 ~ 3494016 (-)
rps16 rps16 other downstream 472592 3299257 ~ 3384923 (-)
G276421 NA other upstream 175625 4082278 ~ 4091863 (-)
G276530 slc35e3,LOC107556774,LOC107710682 other upstream 391207 4297860 ~ 4300524 (-)
LOC113523868 NA other upstream 424607 4331260 ~ 4343545 (-)
LOC117599555 LOC108279645 other upstream 450886 4357539 ~ 4457121 (-)
G276503 LOC108279645 other upstream 451972 4358625 ~ 4587096 (-)

Expression


Co-expression Network