slc25a3a (slc25a3a,slc25a3,LOC108279629,LOC108437945,LOC107732290)


Basic Information

Item Value
gene id slc25a3a
gene name slc25a3a,slc25a3,LOC108279629,LOC108437945,LOC107732290
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 4954291 ~ 4965093 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034313265.1
GTCTCTCTGCGTCTGACAGTAAATCCTTGGTGCAGGTGAAAATGTACCCATCAGGACTGAAGTGTTTATCCCGGGTCAAGCTTTTCCACTCGCCGCTAATCTCCTTACAGCAGCGTGGAGATGAACAGAGACGCCGCACGCTGACCGCAGCCTCCTACCACGAGGCTGATGTGAGCTGTGAGTACGGCTCGTATAAATACTACGCCCTGTGCGGATTCGGAGGCGTCCTGAGCTGTGGGCTCACACACACCGCCGTCGTGCCTCTCGACCTGGTCAAATGTCGCATCCAGGTAAACCCGGGTAAATACAAGTCCATCTTTAACGGCTTCTCCGTAACCGTGAGGGAGGACGGGCTCCGGGGTCTGGCTCGAGGATGGGCTCCTACGTTTATTGGCTACTCCATGCAGGGGCTCTGCAAGTTCGGCTTCTACGAGCTCTTCAAAGCGCTCTATAATGACATGCTAGGAGAGGAGAACGCTTACCTCTGGAGAACGTCTGTGTACTTGGCCGCTTCTGCCAGCGCTGAGTTCTTTGCTGATGTTGCTCTGGCCCCCATGGAGGCGTGTAAAGTGCGGATCCAGACGCAGCCAGGTTACGCCAGAACCCTGAGAGAGTGCGCCCCGAAGATGCATGCAGAAGAGGGGCTGTGGGCGTTCTACAAAGGCGTGTATCCTCTGTGGCTGCGTCAGATCCCCTACACCATGATGAAGTTTGCGTGTTTTGAGCGTACGGTGGAGATGCTGTACAAGTACGTGGTGCCCAAACCTCGCAGCGCCTGCTCCAAACCCGAGCAGCTCGTCGTCACCTTCATCGCTGGGTACATCGCTGGTGTGTTCTGCGCTGTGGTTTCCCATCCGGCCGACTCGGTGGTGTCCGTGCTCAACAAGGAGAAAGGAAGCTCAGCCACACAGGTGCTTAAGAGACTGGGACCTCGGGGCGTGTGGAAGGGGCTGTTTGCTCGCATCATCATGATCGGCACACTCACCGCCCTGCAGTGGTTCATCTACGATTCGGTCAAGGTTTATTTCCGCCTGCCGCGCCCGCCTCCCCCAGACATGCCCGAGTCTCTGAAGAGGAAGATGAGTTTGGCGGGCCAATagaggaaaacacacatacacacacacacacacacacacacacacacacacacccctcacggTCTACCAAAACGTTGGTGTGATTTCACCAGTGAATGACAGTGACATTAATTCTGGAGTAAAGTTGAAGATATTAAAAGCCACAAAGCCTCAGTTATGCCTCAGTGGTCTGATTTGTTATTGTTCATGGAGctgtcacacacaacacaatacatacaACACAAGCCAGTGAACGTCACAGAACCTGAAATAAACTCGTACATTTTACTGGGTTTTAACTGGAGCTAGATAAACAGATGATCATGGATAACCGCGAACCGTGAACTAAATGTGAGATGTaagaaaatgtctgttttttctaATACGTTGGATTTAAATACAACCAAGAACTAAAGTGTGCCAGAGCATTAATTAGAGAAATGATGATTTAGTGAACGAgtttgtgagcagaaaagcaagaaagaaagaagctagCATGATTCTTAAGACTTCCCTCTGTATAGCGCATAATGCACGTATAATATAGTAACGTAcaccttttattctttttttattcagtcttttaatgtgaaataatgtgGAAGGAGTGAAGGAGGCTGGAAGTGAAAGTGGCAAGTGATTTCTTACGTTACTGTTATTGAGTTCAGTCTGAATATACATGTGTGTtgaaacacaaagaaaacaccAACTTTCCGTGAATCATTTCTATCGTTTATGATAATTCACTTGAGTGCAAAGGTTTGTGCACCCCCTAATGGTTACtgggtgcaaaaaaaaaggaaaatatccCTGTCTgttacaatttatctacaaacTAATAAAATTACAAGTGATT
>XM_034313267.1
GTCTCTCTGCGTCTGACAGTAAATCCTTGGTGCAGGTGAAAATGTACCCATCAGGACTGAAGTGTTTATCCCGGGTCAAGCTTTTCCACTCGCCGCTAATCTCCTTACAGCAGCGTGGAGATGAACAGAGACGCCGCACGCTGACCGCAGCCTCCTACCACGAGGCTGATGTGAGCTGTGAGTACGGCTCGTATAAATACTACGCCCTGTGCGGATTCGGAGGCGTCCTGAGCTGTGGGCTCACACACACCGCCGTCGTGCCTCTCGACCTGGTCAAATGTCGCATCCAGGTAAACCCGGGTAAATACAAGTCCATCTTTAACGGCTTCTCCGTAACCGTGAGGGAGGACGGGCTCCGGGGTCTGGCTCGAGGATGGGCTCCTACGTTTATTGGCTACTCCATGCAGGGGCTCTGCAAGTTCGGCTTCTACGAGCTCTTCAAAGCGCTCTATAATGACATGCTAGGAGAGGAGAACGCTTACCTCTGGAGAACGTCTGTGTACTTGGCCGCTTCTGCCAGCGCTGAGTTCTTTGCTGATGTTGCTCTGGCCCCCATGGAGGCGTGTAAAGTGCGGATCCAGACGCAGCCAGGTTACGCCAGAACCCTGAGAGAGTGCGCCCCGAAGATGCATGCAGAAGAGGGGCTGTGGGCGTTCTACAAAGGCGTGTATCCTCTGTGGCTGCGTCAGATCCCCTACACCATGATGAAGTTTGCGTGTTTTGAGCGTACGGTGGAGATGCTGTACAAGTACGTGGTGCCCAAACCTCGCAGCGCCTGCTCCAAACCCGAGCAGCTCGTCGTCACCTTCATCGCTGGGTACATCGCTGGTGTGTTCTGCGCTGTGGTTTCCCATCCGGCCGACTCGGTGGTGTCCGTGCTCAACAAGGAGAAAGGAAGCTCAGCCACACAGGTGCTTAAGAGACTGGGACCTCGGGtcttttaatgtgaaataatgtgGAAGGAGTGAAGGAGGCTGGAAGTGAAAGTGGCAAGTGATTTCTTACGTTACTGTTATTGAGTTCAGTCTGAATATACATGTGTGTtgaaacacaaagaaaacaccAACTTTCCGTGAATCATTTCTATCGTTTATGATAATTCACTTGAGTGCAAAGGTTTGTGCACCCCCTAATGGTTACtgggtgcaaaaaaaaaggaaaatatccCTGTCTgttacaatttatctacaaacTAATAAAATTACAAGTGATT

Function

symbol description
slc25a3a Predicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial inner membrane. Is expressed in several structures, including alar plate midbrain region; musculature system; optic vesicle; pronephric duct; and visual system. Orthologous to human SLC25A3 (solute carrier family 25 member 3).
slc25a3 Predicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Located in mitochondrion.

NR:

description
PREDICTED: phosphate carrier protein, mitochondrial

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15102 SLC25A3, PHC, PIC; solute carrier family 25 (mitochondrial phosphate transporter), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034313265.1 True 1932 mRNA 0.48 8 4954291 4965093
XM_034313267.1 False 1213 mRNA 0.52 8 4954291 4965093

Neighbor

gene id symbol gene type direction distance location
ldhba ldhb,ldhba,LOC107659842,LOC107589975,LOC107725606,LOC107586539,LOC107744904,LOC107694687 coding downstream 15478 4925716 ~ 4938813 (-)
gys2 gys2,LOC107659841,LOC107694689 coding downstream 36511 4897270 ~ 4917780 (-)
psmc2 psmc2,LOC103382982 coding downstream 161494 4784128 ~ 4792797 (-)
cd36 cd36 coding downstream 893777 4044706 ~ 4060514 (-)
kdm7aa kdm7a coding downstream 1008990 3919302 ~ 3945301 (-)
strap strap,LOC107744907,LOC107586834,LOC107725662,LOC107694684 coding upstream 23388 4988481 ~ 5003791 (-)
sox5 sox5,LOC107725540,LOC107590035,LOC107587062 coding upstream 115719 5080812 ~ 5315907 (-)
bcat1 bcat1,LOC107725514,LOC107659834,LOC107587341 coding upstream 374680 5339773 ~ 5361979 (-)
casc1 casc1 coding upstream 440381 5405474 ~ 5419057 (-)
parpbp parpbp coding upstream 499220 5464313 ~ 5487007 (-)
LOC113531850 NA non-coding downstream 9013 4943549 ~ 4945278 (-)
G276753 NA non-coding downstream 73283 4880418 ~ 4881008 (-)
G276761 NA non-coding downstream 77499 4817108 ~ 4876792 (-)
G276755 prdm4 non-coding downstream 109920 4801907 ~ 4844371 (-)
G276749 NA non-coding downstream 155134 4798659 ~ 4799157 (-)
G276980 NA non-coding upstream 141787 5106880 ~ 5110968 (-)
G276985 NA non-coding upstream 159380 5124473 ~ 5125478 (-)
LOC117599571 NA non-coding upstream 350814 5315907 ~ 5326714 (-)
G277065 NA non-coding upstream 390807 5355900 ~ 5358204 (-)
G277066 NA non-coding upstream 393358 5358451 ~ 5359228 (-)
G276650 LOC108279602 other downstream 215292 4734931 ~ 4738999 (-)
G276503 LOC108279645 other downstream 367195 4358625 ~ 4587096 (-)
LOC117599578 LOC108279645 other downstream 471726 4466061 ~ 4482565 (-)
LOC117599555 LOC108279645 other downstream 497170 4357539 ~ 4457121 (-)
tmpoa LOC108279628 other upstream 1139 4966232 ~ 4984315 (-)
copg2 copg2,LOC108279806,LOC102787195,LOC107744880,LOC107676915 other upstream 1016045 5981138 ~ 6005129 (-)
G277575 copg2,LOC108279806,LOC102787195 other upstream 1017199 5982292 ~ 5984564 (-)
camk1da camk1da,LOC108279878,LOC108428135,LOC107743755,LOC107658855,LOC107726013,LOC107656221 other upstream 2456895 7421988 ~ 7500079 (-)
avpr1ab LOC108279517 other upstream 3001726 7966819 ~ 7970571 (-)

Expression


Co-expression Network