Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC113540133 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32815429 ~ 32816281 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC113540133 | True | 738 | V_segment | 0.41 | 2 | 32815429 | 32816281 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nmnat2 | nmnat2,LOC107658365,LOC107563562 | coding | downstream | 1087877 | 31710064 ~ 31727552 (-) |
| LOC113540064 | NA | coding | downstream | 1270795 | 31538539 ~ 31544634 (-) |
| psmb5 | psmb5,LOC107668975,LOC108438927,LOC107706341,LOC106569426 | coding | downstream | 1282171 | 31528370 ~ 31533258 (-) |
| LOC113540461 | LOC108267708,LOC107591395 | coding | downstream | 1313051 | 31379473 ~ 31502378 (-) |
| LOC113540063 | LOC108267709 | coding | downstream | 1451158 | 31360647 ~ 31364271 (-) |
| LOC117597140 | NA | coding | upstream | 7277 | 32823558 ~ 32825567 (-) |
| LOC117596924 | NA | coding | upstream | 18758 | 32835039 ~ 32835722 (-) |
| LOC117596934 | NA | coding | upstream | 27820 | 32844101 ~ 32845270 (-) |
| LOC117597141 | NA | coding | upstream | 156504 | 32972785 ~ 32977700 (-) |
| LOC117597142 | NA | coding | upstream | 180075 | 32996356 ~ 32996892 (-) |
| LOC117597139 | NA | non-coding | downstream | 3694 | 32810432 ~ 32811735 (-) |
| LOC117596923 | NA | non-coding | downstream | 5133 | 32809596 ~ 32810296 (-) |
| LOC117596938 | NA | non-coding | downstream | 11207 | 32803554 ~ 32804222 (-) |
| LOC117596927 | NA | non-coding | downstream | 37631 | 32776966 ~ 32777798 (-) |
| LOC117596968 | NA | non-coding | downstream | 46147 | 32767588 ~ 32769282 (-) |
| LOC117596967 | NA | non-coding | upstream | 33646 | 32849927 ~ 32851375 (-) |
| G74702 | NA | non-coding | upstream | 45926 | 32862207 ~ 32862659 (-) |
| LOC117596966 | NA | non-coding | upstream | 55465 | 32871746 ~ 32873023 (-) |
| G74717 | NA | non-coding | upstream | 209140 | 33025421 ~ 33025846 (-) |
| G74720 | NA | non-coding | upstream | 214761 | 33031042 ~ 33031426 (-) |
| LOC117596929 | NA | other | downstream | 150009 | 32661892 ~ 32665420 (-) |
| G74644 | NA | other | downstream | 170895 | 32644024 ~ 32644534 (-) |
| LOC117596950 | NA | other | downstream | 181718 | 32633213 ~ 32633711 (-) |
| LOC117596946 | NA | other | downstream | 611524 | 32203394 ~ 32203905 (-) |
| LOC117597125 | NA | other | downstream | 637305 | 32175807 ~ 32178124 (-) |
| G74703 | NA | other | upstream | 49665 | 32865946 ~ 32868466 (-) |
| LOC117597171 | NA | other | upstream | 129853 | 32946134 ~ 32947158 (-) |
| LOC117597170 | NA | other | upstream | 133553 | 32949834 ~ 32950494 (-) |
| LOC117597177 | NA | other | upstream | 154723 | 32971004 ~ 32971513 (-) |
| LOC117597009 | NA | other | upstream | 218622 | 33034903 ~ 33042101 (-) |
